Protein

View in Explore
Genbank accession
YP_009785546.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,82
Seq2Symm
C1 confidence 0,712
C1 0,712
I 0,479
H 0,022
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTDTIEEICNTSISLTQLQAGYTLFDLPATDGFVIRDLIVSNVKNRRVILMRNSALWRVVDASMALSGTEILPKGSEVTAQYTGSPIFNGFQSVGQNGVSVTTTNTIFDDGLPKTNTSILVGMAPVTTVGNSPVISTPLTLTPIFQYLASNGDFYYASDAGVCYRRAGGVNGAQTSIFSGNPVGAITVDPVTGIMYAYHNNSGNNIIYRHNTTNNTPLSSITPDTAPYTASSGNPTRLAVAAYNNVLYVGTYSNNTIWVINATTGALITSFAVSASPGSQRPQMRFHKTKDDNVYFTYVHATDGMSVYSIAGGNPATAPGSPVLVAMAMNIFNNAIYTRLVSLVGTDYVLAYDGTSFQFINLTNKTFFTQTSATPGNTYILQSTSGYDAARASADFGSVVVEVQGVRFN
Physico‐chemical
properties
protein length:409 AA
molecular weight: 43562,28330 Da
isoelectric point:5,76634
aromaticity:0,10024
hydropathy:0,04425

Domains

View on InterPro
Domain architecture
YP_009785546.1
1 409 aa
STR 95–144 · ATT 145–317 · STR 318–391 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009785546.1
1 409 aa
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,6763
Central domain 100 306 208 0,5209
C-terminal 307 409 102 0,8000
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Caulobacter phage Seuss [NCBI] · taxon 1675601
Uroviricota Caudoviricetes Seussvirus Seussvirus seuss
Host
Caulobacter crescentus [NCBI] · taxon 155892
Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter vibrioides

Coding sequence (CDS)

Genbank protein accession
YP_009785546.1 [NCBI]
Genbank nucleotide accession
NC_047757 [NCBI]
CDS location
range 31951 -> 33180
strand +
CDS
ATGACCGACACGATTGAAGAAATCTGCAACACCTCGATCTCTCTGACTCAGCTCCAAGCCGGATATACGCTTTTTGATCTTCCTGCGACCGATGGTTTTGTCATTCGAGACCTGATTGTCTCGAATGTGAAGAACCGCCGAGTGATCCTCATGCGGAACTCAGCCCTCTGGCGCGTCGTGGACGCCTCCATGGCTCTGTCGGGTACGGAGATCTTGCCGAAGGGGTCTGAGGTCACTGCTCAATACACAGGCTCGCCGATTTTCAATGGCTTTCAAAGTGTCGGACAAAATGGTGTCTCGGTCACCACGACGAACACGATTTTCGACGATGGCCTGCCTAAGACCAACACCTCTATACTAGTAGGTATGGCTCCAGTGACTACCGTGGGTAACTCCCCGGTGATCTCTACACCTCTAACTCTAACGCCTATTTTCCAATACCTCGCCAGTAATGGCGACTTCTATTACGCCTCCGACGCTGGGGTATGTTATCGCCGGGCCGGGGGCGTCAACGGCGCTCAAACCTCTATCTTCTCAGGTAATCCTGTCGGGGCTATAACAGTAGACCCTGTTACTGGGATCATGTACGCCTATCACAATAATAGCGGTAATAATATTATCTATCGGCATAATACCACGAACAATACGCCGCTTTCTAGTATAACTCCAGACACAGCTCCCTACACCGCCTCCAGCGGCAATCCGACAAGGTTAGCTGTCGCAGCGTATAACAACGTTCTGTACGTTGGAACATACAGCAATAATACAATCTGGGTCATCAATGCCACTACTGGTGCTTTGATTACCAGCTTCGCCGTCTCAGCATCCCCCGGTTCTCAGCGACCTCAGATGCGTTTCCATAAGACGAAAGACGATAATGTCTACTTTACCTATGTGCATGCCACAGACGGTATGAGTGTCTACTCTATTGCTGGGGGTAATCCGGCGACTGCGCCTGGGAGCCCCGTCCTAGTTGCTATGGCGATGAACATTTTCAATAACGCAATTTACACCCGGTTAGTTTCATTGGTCGGCACAGACTACGTACTGGCATATGACGGTACAAGCTTTCAATTTATCAATCTCACGAACAAGACTTTCTTTACCCAAACGTCAGCCACCCCTGGTAACACCTATATTCTGCAAAGCACCTCTGGTTACGATGCCGCGAGAGCCTCAGCTGATTTCGGGTCAGTGGTTGTTGAGGTACAAGGTGTTCGCTTTAATTAA

Genome Context

Tertiary structure

YP_009785546.1
ESMFold structure
Source ESMFold
pLDDT 61.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Complete Genome of Caulobacter crescentus Siphophage Seuss Sloan,J.M., Keene,J., Cahill,J.L., Rasche,E.S. and Everett,G.F.K. 2015-10-29 26430045 GenBank