Protein

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Genbank accession
CAB4214425.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MSYIRLTNFAAKDALITGNAAKVVRGTELGAEFDSLVVQDALNVKTGGALGTPSSGTLTNCTGLPVSTGVTGTLPVANGGTALTTVGTSGNVLTSNGSAWVSSPSFISGMIMLWAGSIVSIPTGWLICDGTNSTPDLRDRFVVGAGTTYAVNATGGSANAVVPSHTHTATDSGHTHTQTGYTPGSDTAGGNGYNQRPVRDAYTLNTGSAVANITVSTTGVSPTNANLPPYLALAYIMKS
Physico‐chemical
properties
protein length:239 AA
molecular weight: 24031,47150 Da
isoelectric point:6,38196
aromaticity:0,05858
hydropathy:0,07741

Domains

Domains [InterPro]
cd22641
62–182
cd22641
SSF88874
107–238
SSF88874
CAB4214425.1
1 239
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4214425.1 [NCBI]
Genbank nucleotide accession
LR797402 [NCBI]
CDS location
range 30346 -> 31065
strand +
CDS
ATGTCATACATACGACTAACAAATTTTGCAGCAAAAGATGCGCTAATCACTGGCAATGCAGCGAAGGTAGTGCGCGGTACTGAGCTTGGTGCTGAATTTGACTCATTGGTGGTACAGGATGCGCTTAATGTCAAGACTGGCGGTGCATTAGGAACACCGTCATCTGGTACGTTGACAAATTGTACAGGATTGCCTGTATCTACTGGTGTAACTGGCACTCTGCCTGTGGCTAATGGTGGAACTGCTCTAACTACTGTTGGTACATCTGGTAATGTCCTAACATCTAATGGAAGTGCATGGGTTAGTTCACCTAGCTTTATCTCAGGTATGATTATGCTGTGGGCTGGTTCTATAGTTTCTATACCCACTGGTTGGCTTATATGTGATGGGACTAACAGCACACCAGATTTAAGGGATAGGTTTGTTGTTGGGGCGGGTACAACCTATGCTGTTAATGCCACAGGAGGTAGTGCAAATGCTGTTGTACCAAGCCACACCCACACAGCTACAGACTCTGGACACACCCATACACAGACAGGGTACACCCCAGGCAGTGATACCGCAGGCGGTAACGGCTATAACCAACGTCCTGTCAGAGATGCATACACCCTGAATACAGGTAGTGCAGTAGCAAATATTACTGTTTCTACAACAGGCGTAAGTCCAACTAATGCTAACCTGCCTCCGTACTTGGCACTTGCTTATATAATGAAGTCATAA

Tertiary structure

PDB ID
ca61e31f926fd39575df45fa7fb5274587459cb8a439b5738e1587fb4aff2280
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7111
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50