Protein

View in Explore
Genbank accession
XRX06283.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTLIRGSKGGGGGSAPTEADDTLSSTAYAQILDLISEGPIFGFPEGKSAGQCIFFDGTPLQNDDGSYNFKLKQFDYRLGYVDQDYIPGFESSSSEKQVGVSLTASSPWSQTITNIDINAVRVTLGVNALSKTDTSTGNVTGYRVAYQIQLSKDGGSFTTVLDTAFDGKASSTYTRSHRIELSGAKSQYTVRVVRLTPDATTQYVQDKTNIVSYAELIDAKLRYPFSALVALMLDAEQFSSMPVRSYDVKGLLVKYPSNYNPQTRQYVGVWDGTFVGGWTDNPAWIFYDLVLNKRYGLGKYVDATMIDRYALYQIAQYCDVLVSDGKGGKEPRFTCNCAITSRADAIKVLQDLASVFRGIAYWSAGTVVASSDMPSDPVYVYTAANVVNGQFKYVGSSLKSRYTSALVTFNDPDNGYKQTVEYVEDAEGIRRYGLNKAEVTAFGCTSRSQAQRVGHWLLLTSRYETNAVTFSVGMYGTLAQPGQVIAIADPSRSGKRIGGRIKQAASKGTVTLDQAPEGAARGDRLTVVTPNGMAQSRAVQSVSDSIVSVQPEFDVQPAPGAVWMLETATLKSQLFRVTSVSEREGITFEISATQHEPGKYDAVDNGAAIEYRPITGETFKAQRPPANVRLSQFVVIDQGIARTNMTVAWDAAPNAIAYVAEFRRDNGDWISAGRTGGLSLDVGNIYSGRYVARVRAVNALDISSPLAYSPETRLNGKTGSPPRPATLVATTDQVLSIGLNWSFPPNSGDTSYTEVWYSTTPRFANATPLSRYGFPTNSASLLNLAAGASLYFWARLVDTSGNIGPWYPAESEPGVYGAATSNATAILAYLVGKITDTELSQELLGPIKEIPDIQQKVTENAAAISSERQARIDENAALAGKIDKVSAQIVVPDMAGSSGDLAGSTTVYAGVWSEQSARVEADLALSRRIDTTTAQLSNTQHSILSAVQTETRARVDADSAQAELITKVQAKADANAANVETVAKSYADLNGRVSASYNIKTQVTVDGRLYVAGIGVGIDNNNGQIESQVLVAAQRFAVVDPNGHTVTSPFVIQGGQVFINQAFIGAGWIQNAMIGDYIQSNNYVAGRSGWRLDKSGWFEINNTDGQGNRLNIDSNGLRGFDANGTLRYRLGFY
Physico‐chemical
properties
protein length:1133 AA
molecular weight: 122084,69180 Da
isoelectric point:5,46350
aromaticity:0,09356
hydropathy:-0,22436

Domains

Domains [InterPro]
DC_0014
STR
1–1133
DC_0014
IPR053171
Unmapped
6–847
IPR053171 IPR015406
IPR055385
ATT
93–219
IPR055385 IPR032876 IPR036116
XRX06283.1
1 1133
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-219 | STR 220-340 | ATT 341-501 | STR 502-1133
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX06283.1
1 1133
Domain Start End Length (AA) Confidence
N-terminal 1 497 497 0,8274
Central domain 498 1076 580 0,0562
C-terminal 1077 1133 56 0,7875
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-497
Central
498-1076
C-terminal
1077-1133

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_SBP33
[NCBI] 		3412859 Viruses >
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX06283.1 [NCBI]
Genbank nucleotide accession
PV072774.1 [NCBI]
CDS location
range 14697 -> 18098
strand +
CDS
ATGACATTGATTCGAGGAAGCAAGGGGGGCGGAGGCGGCAGCGCCCCCACTGAGGCAGACGACACACTCAGCAGCACTGCATACGCGCAGATTCTCGACCTCATTTCGGAGGGGCCGATTTTTGGCTTTCCGGAGGGTAAGAGCGCGGGTCAATGTATCTTCTTCGACGGGACACCGCTCCAGAACGACGACGGTTCGTATAACTTCAAGCTCAAGCAATTCGATTACCGTCTCGGGTACGTAGACCAAGATTACATACCCGGTTTCGAAAGCTCGTCGTCAGAGAAGCAGGTAGGCGTATCCCTTACCGCCTCCTCTCCGTGGTCGCAGACGATCACGAACATCGACATCAACGCCGTGCGTGTGACTCTCGGCGTCAACGCACTATCTAAGACGGATACCTCGACGGGGAACGTCACGGGTTATCGCGTTGCATACCAAATCCAGCTATCGAAAGATGGCGGCTCGTTCACTACGGTACTCGATACTGCGTTCGATGGGAAAGCGAGTTCGACCTACACGCGCTCCCATCGAATCGAACTCAGCGGCGCAAAGTCACAATACACCGTTCGCGTTGTTCGACTAACCCCGGATGCAACGACGCAGTACGTTCAAGACAAGACGAATATCGTCAGCTATGCAGAACTGATAGACGCGAAGCTCCGATACCCGTTCAGTGCTCTGGTTGCTCTGATGCTGGATGCAGAGCAGTTCTCTAGCATGCCTGTACGTTCCTACGACGTGAAAGGCTTGCTCGTGAAATACCCAAGCAACTACAACCCGCAGACGAGGCAGTACGTCGGCGTGTGGGACGGAACCTTCGTTGGCGGCTGGACGGATAACCCCGCATGGATCTTTTACGACCTCGTGCTCAACAAGCGTTACGGGCTAGGCAAGTATGTAGACGCGACGATGATCGATCGCTATGCGTTGTATCAGATTGCTCAGTATTGCGATGTTCTGGTCTCAGACGGCAAAGGCGGCAAGGAACCGCGCTTTACGTGCAACTGCGCAATCACCTCCCGAGCGGATGCTATCAAAGTCTTGCAAGACCTCGCGAGCGTGTTTCGCGGCATCGCCTATTGGTCGGCGGGAACTGTTGTTGCGTCGTCCGACATGCCCAGCGACCCCGTGTATGTCTATACGGCTGCCAACGTCGTCAACGGCCAATTCAAGTACGTCGGCAGTTCGCTTAAGTCGCGCTACACATCGGCGCTCGTAACGTTCAACGACCCCGACAACGGATACAAGCAGACTGTCGAATACGTAGAAGACGCGGAAGGTATTCGAAGATACGGGCTCAACAAGGCCGAAGTGACCGCCTTCGGTTGCACGAGTCGATCCCAGGCACAACGCGTCGGCCATTGGCTGCTCCTCACGTCCCGCTACGAGACGAACGCGGTTACATTCAGCGTCGGGATGTATGGCACGTTAGCGCAGCCGGGGCAGGTAATCGCGATTGCTGACCCGTCGCGATCAGGAAAGAGAATCGGCGGGCGTATCAAGCAGGCCGCATCCAAGGGGACGGTAACACTCGACCAAGCTCCGGAAGGTGCCGCGCGCGGCGACCGCTTGACGGTAGTCACGCCTAACGGAATGGCCCAGTCTCGCGCAGTTCAGTCCGTTAGCGACTCGATCGTAAGCGTACAGCCCGAATTCGACGTGCAGCCCGCTCCCGGCGCGGTATGGATGCTGGAGACGGCTACTCTCAAATCGCAGCTTTTCCGGGTTACCAGCGTCAGCGAGCGCGAAGGAATCACCTTCGAGATTTCAGCGACGCAGCATGAGCCAGGCAAGTATGACGCTGTGGACAACGGGGCCGCGATTGAGTACCGGCCAATCACCGGAGAAACCTTCAAGGCACAGCGCCCTCCGGCTAACGTCCGCCTCTCTCAGTTCGTCGTCATCGATCAAGGCATCGCCCGTACCAACATGACAGTTGCTTGGGATGCCGCTCCCAACGCAATCGCATACGTCGCGGAATTCCGCAGGGATAACGGAGATTGGATTTCAGCGGGTAGGACTGGCGGGCTATCCCTGGATGTAGGCAACATCTACAGCGGGCGTTACGTTGCACGCGTGCGCGCTGTCAACGCGCTAGACATCTCGTCACCCCTCGCGTACTCGCCGGAAACGCGCCTGAACGGGAAAACGGGTTCTCCGCCCCGCCCTGCTACGCTCGTCGCGACCACGGATCAGGTATTGTCGATCGGGTTGAATTGGTCATTCCCGCCGAACTCCGGCGACACGTCGTACACCGAAGTTTGGTACAGCACGACGCCACGCTTTGCGAATGCTACCCCGCTATCGCGGTATGGCTTCCCGACGAACTCGGCGAGCCTGCTGAATCTAGCGGCGGGCGCGTCGCTGTACTTCTGGGCGCGGCTTGTTGATACGTCCGGCAACATTGGTCCGTGGTATCCGGCGGAATCGGAACCCGGCGTGTACGGGGCGGCCACGTCGAACGCAACAGCAATTCTCGCGTACCTCGTCGGCAAGATCACCGATACGGAACTCTCCCAAGAGTTGCTCGGCCCGATCAAAGAGATTCCCGACATTCAGCAGAAGGTAACGGAGAACGCTGCGGCAATTTCTTCGGAGCGGCAGGCTCGGATTGACGAGAACGCCGCACTCGCCGGAAAGATCGATAAAGTCTCGGCTCAGATCGTTGTTCCCGACATGGCAGGCAGTTCGGGCGACCTCGCCGGATCGACAACGGTATACGCTGGAGTATGGTCGGAGCAATCCGCGCGCGTAGAGGCGGACCTCGCACTTTCTCGCCGAATCGACACGACGACAGCCCAGCTAAGCAACACACAGCACTCCATACTTTCCGCCGTTCAGACGGAAACCCGCGCGCGTGTAGACGCAGACAGCGCGCAAGCAGAACTCATCACGAAGGTACAGGCGAAGGCCGATGCAAACGCGGCAAACGTCGAGACCGTTGCGAAGTCATACGCGGACCTCAACGGCCGTGTATCGGCGTCGTACAACATCAAGACGCAAGTAACCGTAGATGGCCGCCTATACGTTGCGGGCATCGGTGTAGGCATCGACAACAACAACGGCCAAATCGAGTCGCAAGTCCTCGTAGCCGCGCAGCGATTCGCAGTTGTCGACCCGAACGGCCACACCGTGACTTCCCCGTTCGTGATTCAGGGCGGGCAGGTCTTCATCAATCAGGCGTTCATCGGCGCGGGCTGGATTCAGAACGCGATGATTGGCGACTACATCCAGAGCAACAACTATGTAGCGGGCCGCTCTGGTTGGAGGCTGGACAAGAGCGGATGGTTCGAAATCAACAACACGGACGGACAAGGAAACCGATTGAACATTGACAGTAACGGCTTGCGCGGCTTCGACGCAAACGGCACCCTGCGGTATCGACTGGGGTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
079612ee7b4cfe5945b00fef0e64d392b0e64daa02c13c90a3867bdf512f18a3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8113
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50