Phage RBP Database

Genbank accession

YP_007003334.1 [GenBank]

Protein name

hypothetical protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,87

Seq2Symm

C3 confidence 0,990

C3	0,990
C1	0,761
I	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGWIKLPGGTGSYETPEGAQAKADAAETSAKAYTDVFAARRDNPHQVTKSQVGLDKVTNVEQASLSQFNEHASDTIKHTSNAERQAWNEKETPGGAQAKADNALSAAKEYTETFINNRDNHAVIEATSSTQTITQNVETVLTILDSVISQKPVESTTTGSGTYKVPESGTYVFHVTLRPTELTQPVSVLRVGLNKTVGEEVTKSPLMDLLATNATSNGYVSGSFLVNLNKDDSVTVFVNALTEDVTLQQGTRVQLFYLGSN

Physico‐chemical properties

protein length:	261 AA
molecular weight:	28059,59890 Da
isoelectric point:	5,06983
aromaticity:	0,06130
hydropathy:	-0,43333

Domain architecture

YP_007003334.1

1 261 aa

RBD 123–256 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR008983
RBD

IPR008983

YP_007003334.1

1261 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0300
STR

DC_0300

YP_007003334.1

1261 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR008983	RBD	IPR008983	123	256	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits

Proteins with similar domain architecture

Phage

Bacillus phage SP-10 [NCBI] · taxon 941058

Uroviricota Caudoviricetes Herelleviridae Bacillus phage SP-10

Host

Bacillus subtilis [NCBI] · taxon 1423

Bacillota Bacilli Caryophanales Bacillaceae Bacillus Bacillus subtilis

Genbank protein accession

YP_007003334.1 [NCBI]

Genbank nucleotide accession

NC_019487 [NCBI]

CDS location

range 28762 -> 29547
strand +

CDS

ATGGGCTGGATTAAACTACCGGGCGGTACTGGAAGCTATGAGACTCCAGAAGGAGCACAAGCAAAGGCAGATGCCGCAGAGACCTCTGCGAAAGCTTATACTGACGTGTTTGCCGCGAGAAGGGACAACCCGCACCAAGTTACAAAAAGTCAAGTAGGACTTGACAAAGTTACAAATGTCGAACAGGCATCTTTGTCACAGTTTAATGAACACGCAAGTGATACTATAAAGCATACGAGCAACGCCGAGAGACAAGCTTGGAATGAAAAAGAAACGCCTGGGGGAGCACAAGCTAAGGCTGACAACGCGTTATCTGCAGCGAAAGAGTATACAGAAACCTTCATTAACAACAGAGATAACCACGCTGTAATCGAGGCAACTTCCAGTACACAAACAATAACGCAGAACGTTGAAACTGTCCTTACTATTCTTGACAGCGTTATTAGTCAGAAACCCGTAGAGAGTACAACAACTGGTAGCGGGACATACAAAGTACCTGAAAGCGGGACTTATGTCTTTCATGTAACACTAAGACCAACAGAGCTAACGCAACCAGTCTCAGTTCTCAGGGTAGGGCTTAACAAGACCGTCGGAGAAGAAGTTACTAAGTCACCCCTAATGGACTTACTAGCAACAAACGCTACCAGTAATGGTTATGTATCTGGGTCATTTTTAGTTAACCTCAACAAGGACGACTCCGTTACAGTTTTTGTAAACGCGTTAACAGAGGATGTTACTCTGCAACAAGGAACAAGAGTTCAGCTGTTCTACTTAGGCAGTAACTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)