Protein

View in Explore

Genbank accession

WYW02705.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,81

Evidence RBPdetect2

Probability 0,96

Protein sequence

MAINLRFIPKALIGWFKDGEHADGSIQEPPVPTEGVLNRPIYNLYQSTEMLQQAIGGYLTLGTTNGSDNNTLLLANGMYQHQALLNPVTMLLPTDKQVPNQTDVTKRTALVVGDAVRVQVTGGTIGTYPVTISGNGTSIDGLPTFIMATPYADYRFIWNGASWDSQLAVGQMGVGGFGNSRVVIPTAANITVGKGEMLWINNTNAIANPKVVLPAGRVGDLVFVGDYSKNSNQFPITVTAAAGQSFEGTVVGSDNIQFISGVKGYQYVDGTTGWRVVDDSLTSGFVKTTAQRGMALTFLGQVTQSTTNTLSATLPTAGALGQVMTAYAAGQRFQFTVATANTSSASLNINGLGAKSISVNGTDSLTGGELSVGKVHDVFYDGTRFQLVSGSKVDLTAYAPITSPTFLGDPKAPTPPLTDNDTSIATTAFVKLAIAALVDSSPGALDTLNELAAALGDDPNFATTINALIATKAPIDSPTLTGDPKAPTAAATDNDTSIATTAFVRAAMAALGVGTAGATNVTDLNSVINGGFYYNAATTATGLPVASNGLLIHTPFGDGSAALQIWATPANPLRIFWRTRSSNAWNAWKEFAGLDSPVFTGDPKAPTPATTDNDTSLATTAFVRAVMAKYGIGTADLDDTTADVNTLTEGGTYQVSSTITINGANYLSGVVIVSSNALYYSQQVFMPQATNRMFQRYSNGQVNNVTQWSAWREIAGLDSPTFTGDPKVPTAALSDSDLTIANTAFVQGLLNASGLGGQAISGDTLNFNDAPLNSFVKAEGTEANSTTYNRPLLGIGSTTAVAFTLITVGVSGAARVTQYANSVFGAGRNRTFTRVKHDSTWYPWAEIASTNSPVLTGDPQAPTAALGDNDLTIANTAFVTAQLAAWGLGTTTSNIVTGNDMNQAVLGGLYRASSTTANIPISANFSVIVVPYNSGGCLQIATALTSGNRMFWRSQAGGNWSAWSESAALDSPALAGTPTAPTPVTTDNSNKLATTQYAQNLNFSSARKFKGVGIGVTTNLVMDSSHAGYWLNLAGSSLNITLPDITTIGAGQTFVFRNPTSTVQTLTAPSGSSISTVTSLQSITLQPYETMELTASGTTYWVVDRGSIDSPNEAIARITGKDVFATSGTWVCPPGVTRIFVSGCGGGGGGGGGAGNSPTGSGGGGGGGAAQYGICEPYTVVPGQSYAITIGARGSAGQGGVATQLTGSNAGNGTNGGNGGNTTIAGIVTYGGGIAGQAGGTVSGAGGLSAGLGATQGGDGFRSADSSGSIIYTLGGNGGTGGSTPFGTAGGGSRAAQGGAQPGRNGTGYGAGGGGGGSAYAPSTTIAGSGGAGSQGMPGFILIEY

Physico‐chemical properties

protein length:	1345 AA
molecular weight:	136591,96220 Da
isoelectric point:	4,90955
aromaticity:	0,07732
hydropathy:	0,00089

Domains

Domains [InterPro]

DC_0567
ATT
182–473

DC_0567 cd19958 cd19958 DC_0678 IPR049304

IPR051934
Unmapped
396–476

IPR051934 DC_0678 cd19958 DC_1777

DC_0678
STR
426–594

DC_0678 DC_0678

WYW02705.1

1 1345

Architecture

ATT

STR

ATT 182-473 | STR 474-1345

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0567	ATT	DC_0567	182	473	Novel HMM	DC_0567	N-terminal	Low	Positional only	2 proteins / 2 hits
IPR051934	Unmapped	-	396	476	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
DC_0678	STR	DC_0678	426	594	Novel HMM	DC_0678	Central	Low	Positional only	23 proteins / 23 hits
cd19958	STR	DC_0464	515	592	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_0678	STR	DC_0678	589	733	Novel HMM	DC_0678	Central	Low	Positional only	23 proteins / 23 hits
cd19958	STR	DC_0464	640	715	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_0678	STR	DC_0678	713	866	Novel HMM	DC_0678	Central	Low	Positional only	23 proteins / 23 hits
DC_0678	STR	DC_0678	845	1021	Novel HMM	DC_0678	Central	Low	Positional only	23 proteins / 23 hits
cd19958	STR	DC_0464	892	967	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_1777	STR	DC_1777	971	1345	Novel HMM	DC_1777	Central	Low	Positional only	9 proteins / 9 hits
IPR049304	STR	DC_0631	1129	1344	InterPro cluster	Glycine-rich domain	C-terminal	Low	Positional only	225 proteins / 228 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage vB_PpuM-Peetri [NCBI]	3132648	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Pseudomonas putida KT2440 and [NCBI]	1481724	Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Genbank protein accession

WYW02705.1 [NCBI]

Genbank nucleotide accession

PP496444.1 [NCBI]

CDS location

range 93156 -> 97193
strand -

CDS

ATGGCTATCAATTTAAGATTCATTCCGAAAGCATTGATCGGCTGGTTTAAAGACGGCGAGCATGCTGACGGTTCGATCCAAGAACCACCCGTACCCACGGAAGGTGTACTGAACAGGCCGATCTATAACCTGTATCAGAGCACTGAGATGCTGCAACAAGCCATTGGCGGTTACCTGACACTGGGCACCACCAACGGTTCGGACAACAACACTCTGCTGCTTGCCAACGGCATGTACCAGCATCAGGCGTTGCTCAACCCGGTCACCATGCTCCTGCCGACGGACAAGCAGGTACCCAACCAGACAGACGTCACCAAACGTACCGCACTGGTCGTAGGTGATGCGGTGCGGGTTCAGGTTACGGGCGGCACCATCGGCACGTACCCGGTGACCATCTCGGGTAACGGCACCAGCATCGACGGCTTGCCTACCTTCATCATGGCAACCCCGTACGCCGACTACCGGTTCATCTGGAACGGCGCATCGTGGGATTCTCAACTGGCCGTAGGTCAGATGGGTGTCGGCGGTTTCGGTAACAGCCGGGTCGTGATTCCGACCGCCGCCAACATCACGGTCGGCAAAGGTGAGATGCTTTGGATCAACAACACCAACGCCATCGCCAACCCCAAGGTAGTATTGCCAGCGGGTCGCGTAGGTGACCTGGTGTTCGTCGGCGACTACTCCAAGAACTCCAACCAGTTCCCGATCACGGTCACAGCGGCTGCAGGTCAGTCTTTCGAGGGCACCGTTGTTGGTTCTGACAACATCCAGTTCATCAGCGGCGTCAAAGGTTACCAGTACGTTGACGGCACCACGGGCTGGCGCGTAGTAGACGACTCGCTCACTTCGGGCTTCGTCAAGACCACAGCACAGCGCGGCATGGCGCTTACCTTCCTCGGTCAGGTCACGCAGTCCACCACCAACACCCTGTCTGCCACGCTGCCAACGGCGGGTGCACTGGGTCAGGTGATGACAGCCTACGCGGCAGGCCAGCGCTTCCAGTTCACGGTGGCTACGGCCAACACCAGCTCTGCCTCCCTGAACATCAACGGTCTGGGTGCCAAGTCGATCTCGGTCAACGGGACTGACTCGCTCACAGGCGGTGAGTTGTCGGTCGGCAAAGTGCACGACGTCTTCTACGACGGCACGCGCTTCCAACTGGTAAGCGGCTCGAAGGTTGACTTGACGGCGTATGCCCCAATCACCAGCCCGACCTTCCTCGGTGATCCGAAGGCTCCAACCCCACCGCTGACAGACAACGATACATCGATTGCCACCACGGCCTTCGTGAAGCTGGCAATTGCGGCATTGGTTGATTCGTCGCCAGGTGCATTGGACACTCTGAACGAACTAGCTGCGGCACTGGGAGACGATCCCAACTTCGCGACCACGATCAACGCGCTGATCGCGACCAAGGCTCCGATTGATTCGCCAACCTTGACGGGTGATCCGAAGGCTCCGACGGCAGCGGCTACCGACAACGACACCTCTATTGCTACCACGGCGTTCGTAAGAGCGGCCATGGCCGCTCTTGGTGTAGGTACAGCAGGTGCAACCAACGTCACCGATCTGAACTCCGTCATCAACGGTGGCTTCTACTACAACGCCGCGACCACGGCCACAGGCCTGCCGGTTGCGTCTAACGGCCTGCTGATCCATACTCCGTTCGGAGACGGCAGCGCAGCATTGCAGATCTGGGCAACCCCCGCTAACCCACTCCGTATCTTCTGGCGTACTCGTTCTTCCAACGCATGGAACGCATGGAAAGAGTTCGCTGGTCTGGACTCCCCGGTGTTCACGGGTGACCCGAAGGCACCAACCCCGGCCACTACTGACAACGACACCTCGCTCGCAACAACGGCGTTCGTTCGCGCAGTCATGGCGAAGTATGGTATCGGTACAGCGGATCTGGATGATACCACCGCCGACGTCAATACACTGACCGAAGGCGGTACGTATCAGGTTAGTTCCACTATCACGATCAACGGTGCGAACTACCTGTCCGGTGTTGTGATCGTTTCAAGCAATGCCTTGTATTACAGCCAGCAGGTTTTCATGCCGCAGGCTACTAACCGCATGTTCCAGCGATATTCCAATGGGCAGGTGAACAACGTCACGCAGTGGTCAGCATGGCGCGAGATCGCTGGGTTGGACTCGCCTACATTCACCGGTGATCCAAAGGTTCCGACTGCTGCATTGTCGGACAGCGACCTGACTATCGCGAACACCGCGTTTGTTCAAGGCTTGTTGAATGCTTCCGGTTTGGGTGGGCAGGCAATCAGCGGTGACACTCTGAACTTCAACGATGCGCCGTTGAACTCCTTCGTCAAGGCTGAAGGTACTGAGGCTAACTCGACCACGTACAACCGACCTTTGCTGGGCATCGGCAGCACAACGGCAGTAGCCTTCACCTTGATCACCGTTGGGGTATCTGGTGCAGCGCGAGTCACCCAGTACGCCAACTCAGTCTTTGGGGCTGGTCGCAACCGTACCTTCACGCGGGTCAAGCACGATTCGACTTGGTATCCATGGGCTGAGATTGCGAGTACCAACTCTCCGGTATTAACTGGCGATCCGCAGGCTCCGACCGCTGCACTGGGCGACAATGACCTGACCATCGCCAACACGGCTTTCGTAACAGCTCAATTGGCTGCATGGGGTCTGGGAACTACCACAAGCAACATCGTCACCGGCAACGACATGAACCAGGCGGTACTCGGCGGCTTGTACCGCGCCTCGTCTACCACTGCCAACATCCCGATCTCGGCTAACTTCTCAGTTATCGTGGTGCCTTATAACTCTGGAGGCTGTCTCCAGATTGCAACGGCACTCACATCGGGTAACCGGATGTTCTGGCGGAGTCAGGCGGGCGGGAACTGGTCGGCATGGAGCGAGTCTGCTGCACTGGATTCCCCAGCTCTGGCTGGTACACCAACTGCACCAACGCCTGTTACAACAGACAACAGCAACAAGTTGGCAACCACGCAGTACGCCCAGAACTTGAACTTTTCATCTGCACGTAAGTTCAAAGGTGTGGGCATCGGGGTAACGACCAACCTGGTGATGGACTCCTCTCATGCTGGTTATTGGTTGAACCTGGCGGGGAGTTCGTTGAACATCACCCTGCCGGACATCACCACGATTGGCGCAGGTCAGACGTTCGTTTTCCGTAACCCGACTTCAACCGTTCAGACGTTGACGGCGCCATCCGGTTCCTCAATCTCCACGGTCACCTCGCTTCAATCGATCACGTTGCAACCGTACGAGACGATGGAGCTTACGGCCAGTGGTACTACCTACTGGGTTGTTGACCGAGGTTCTATTGATTCCCCTAACGAGGCAATCGCTCGAATCACGGGCAAAGACGTATTTGCAACCAGTGGTACTTGGGTATGCCCTCCCGGCGTTACCCGGATATTCGTCTCGGGTTGTGGCGGTGGCGGTGGCGGTGGCGGGGGTGCAGGTAACTCCCCGACTGGTTCAGGTGGTGGTGGTGGTGGTGGTGCAGCCCAATACGGTATCTGCGAACCCTACACCGTAGTTCCAGGTCAGAGTTACGCGATCACCATTGGTGCCCGAGGTAGCGCTGGTCAAGGCGGAGTTGCTACACAGCTGACGGGTAGTAACGCAGGTAACGGCACTAACGGCGGTAACGGCGGGAACACCACGATTGCAGGCATCGTAACCTATGGTGGTGGTATCGCTGGTCAAGCTGGGGGTACAGTTTCTGGTGCCGGTGGTCTGTCCGCTGGACTGGGGGCGACTCAAGGTGGTGACGGTTTCCGCTCCGCAGATAGTTCGGGTTCGATCATCTACACCCTCGGTGGTAATGGTGGTACTGGTGGATCTACTCCATTCGGTACTGCAGGTGGGGGTAGCCGAGCTGCTCAAGGTGGTGCTCAGCCGGGCCGTAACGGCACTGGGTACGGTGCAGGTGGTGGCGGTGGTGGTTCTGCTTATGCCCCAAGCACCACCATTGCCGGTTCAGGTGGTGCTGGTAGCCAAGGCATGCCGGGCTTCATCCTCATCGAATATTAA

Genome Context

Tertiary structure

PDB ID

1b75770b3357e2afae7e594958af663bf6f48e2742b6dd7ca0313521f3161c41

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6477

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Isolation and characterization of a phage collection against Pseudomonas putida	Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H.	—	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature