Protein

View in Explore
Genbank accession
AIX40559.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,45
Seq2Symm
C3 confidence 0,999
C3 0,999
C1 0,038
C2 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSQLNVGKVNVTGDGVQYPQYTNSNRPAGTTGLVIYNTTESKLQVYTGSEWESVGADEEAGAGTEGLQVSRGNRSQRPANDSTWNRDATIRYNTEQSTLESYFDVSQSGDGGRDGWYAVGGKQMLYHMSARTGAWNAWNARWGTTYTNHDYYQYKFYITTSDPNGTDRFWLRYWRADNNISTSGYYFSGEWWHSNDGGSRQNSQNNSYWPITVVNNNSYRMNPTGESGYQGEIMMSNTPNSNNTNYWNMYCNYNYWSQQECGTGWQGCQWTGATQSGTGYPISGFRIGHQDGNSVRACSTGTNTIISVFGVAGSEAKEWSGSW
Physico‐chemical
properties
protein length:323 AA
molecular weight: 36207,40280 Da
isoelectric point:5,25888
aromaticity:0,14551
hydropathy:-0,93344

Domains

View on InterPro

No domain architecture available.

Taxonomy

Phage
Synechococcus phage ACG-2014d [NCBI] · taxon 1493509
Uroviricota Caudoviricetes Pantevenvirales Lowelvirus Lowelvirus tuscon4d
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
AIX40559.1 [NCBI]
Genbank nucleotide accession
KJ019139.1 [NCBI]
CDS location
range 164933 -> 165904
strand +
CDS
ATGTCCCAACTAAATGTAGGAAAGGTTAACGTCACGGGTGATGGCGTACAGTACCCACAATATACAAATTCAAACAGGCCAGCTGGCACCACAGGACTGGTAATTTACAACACTACCGAAAGCAAACTTCAAGTTTACACAGGTTCCGAATGGGAATCTGTAGGTGCAGATGAAGAAGCAGGTGCTGGCACCGAAGGGTTGCAGGTCTCTAGAGGAAATAGATCGCAGCGTCCTGCTAACGACAGTACCTGGAACCGTGATGCTACTATCCGTTATAATACTGAGCAATCTACTTTAGAAAGTTACTTTGATGTTTCTCAGTCTGGTGATGGTGGTCGCGACGGTTGGTATGCTGTTGGTGGTAAGCAAATGCTTTATCACATGTCTGCAAGAACTGGTGCATGGAACGCCTGGAATGCTAGATGGGGTACAACATATACAAACCACGACTACTATCAATATAAATTCTACATCACTACCTCTGACCCGAATGGTACTGACCGTTTCTGGTTGAGATATTGGAGAGCAGATAATAATATTTCCACTAGTGGTTACTATTTCTCTGGAGAATGGTGGCACTCTAATGATGGTGGATCTAGACAGAACTCACAGAATAATTCTTACTGGCCTATTACTGTTGTTAACAACAACTCTTACCGTATGAATCCAACGGGTGAGAGTGGTTATCAGGGTGAGATTATGATGTCTAACACCCCCAACAGCAATAACACCAACTACTGGAACATGTATTGCAACTACAACTACTGGTCTCAGCAGGAATGTGGTACTGGTTGGCAGGGTTGTCAGTGGACTGGTGCCACTCAATCTGGTACAGGATATCCGATCTCTGGTTTCAGAATCGGTCACCAAGATGGTAACAGTGTTCGTGCCTGCTCAACTGGTACTAACACAATCATCTCGGTCTTCGGTGTTGCTGGATCCGAAGCAAAAGAATGGTCTGGTTCTTGGTAA

Genome Context

Tertiary structure

AIX40559.1
ESMFold structure
Source ESMFold
pLDDT 60.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank