Protein

View in Explore
Genbank accession
AGH07673.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,74
Seq2Symm
C1 confidence 0,990
C1 0,990
C2 0,049
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MVYNGIMKNKHLEHPEDSILTLGKEGAIDVIKFLKSKRNQISVKYDGAPAIVYGTNPENGRFFVGTKSVFNKKKVKINYSHADIELNHGHIPNVASILHTCLECLPTDHGVYQCDFIGYGGENTFKPNTITYKFDKVIKQSVVVATHTQYIGKTIQDLDAVFHYRNNNYCNLDCTNLRHYQVDTHANMDSRLNIKIELLFALARTLVRFVEFPTLKEGKALKIIVNSYVRQGKKLIPEQLASDTGYSKNLFHLYNMIIEIKELLMQSITASEDVECLIDGQPYEHEGYVMTNKYGTYKLIKRQRFSYANFNMKKTWGVPVE
Physico‐chemical
properties
protein length:321 AA
molecular weight: 36802,89910 Da
isoelectric point:8,87815
aromaticity:0,10592
hydropathy:-0,34673

Domains

View on InterPro
Domain architecture
AGH07673.1
1 321 aa
STR 9–241 · STR 247–314 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AGH07673.1
1 321 aa
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,1667
Central domain 131 310 181 0,3411
C-terminal 311 321 10 0,9975
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cyanophage S-SSM6a [NCBI] · taxon 682650
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
AGH07673.1 [NCBI]
Genbank nucleotide accession
HQ317391 [NCBI]
CDS location
range 163057 -> 164022
strand +
CDS
ATGGTGTATAATGGTATTATGAAGAACAAACACCTAGAACACCCAGAGGATAGTATCCTGACCCTTGGCAAGGAAGGTGCTATTGATGTAATCAAGTTTTTGAAGAGTAAGAGAAATCAAATATCAGTCAAGTATGATGGTGCCCCTGCCATTGTGTATGGAACTAACCCTGAGAATGGTAGATTCTTTGTTGGTACTAAATCAGTATTCAACAAGAAGAAAGTCAAGATAAACTATTCTCATGCAGATATTGAATTGAATCATGGTCATATCCCAAACGTAGCAAGTATTCTACACACTTGCCTTGAGTGTTTGCCTACAGATCATGGTGTATATCAATGTGACTTTATTGGTTATGGTGGTGAGAATACTTTCAAACCAAACACTATTACCTACAAATTTGATAAAGTAATCAAACAGTCAGTTGTTGTAGCAACTCATACTCAATATATTGGTAAAACTATTCAAGATTTAGATGCAGTATTCCATTACAGGAACAATAATTATTGCAATCTCGACTGTACCAACTTGAGACACTACCAAGTGGATACTCATGCTAACATGGATTCCCGCTTAAATATCAAGATCGAACTTTTGTTTGCTCTTGCTCGCACGTTAGTACGTTTTGTGGAGTTCCCTACTCTCAAAGAAGGAAAAGCACTAAAGATAATCGTCAACAGTTATGTGAGACAAGGTAAGAAACTTATCCCTGAGCAACTTGCAAGTGATACAGGATACTCAAAAAACTTGTTTCACTTATACAATATGATTATTGAGATAAAGGAACTGTTGATGCAAAGTATCACAGCATCAGAAGATGTTGAGTGCCTTATTGATGGTCAACCCTATGAACATGAGGGTTATGTTATGACCAACAAATATGGTACATACAAACTTATCAAACGTCAACGCTTCAGTTATGCAAACTTCAATATGAAAAAGACATGGGGTGTGCCAGTTGAATAA

Genome Context

Tertiary structure

AGH07673.1
ESMFold structure
Source ESMFold
pLDDT 79.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM6a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank