Protein

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Genbank accession
ASD53244.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,32
Seq2Symm
C3 confidence 0,997
C3 0,997
C1 0,332
C2 0,004
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MKTIVITLLLSISTYSQVGIATTTPTETLDVNGTARVRNLTDGTIQTNSTGVLSIMPNMNSVFDESVENGEVKKFVRSNQIYVFE
Physico‐chemical
properties
protein length:85 AA
molecular weight: 9301,45370 Da
isoelectric point:4,92495
aromaticity:0,05882
hydropathy:0,02941

Taxonomy

Phage
Flavobacterium phage VK48 [NCBI] · taxon 1984755
Uroviricota Caudoviricetes Ficleduovirus
Host
Flavobacterium columnare [NCBI] · taxon 996
cellular organisms Bacteria Pseudomonadati FCB group Bacteroidota/Chlorobiota group Bacteroidota

Coding sequence (CDS)

Genbank protein accession
ASD53244.1 [NCBI]
Genbank nucleotide accession
KY979245.1 [NCBI]
CDS location
range 46144 -> 46401
strand +
CDS
ATGAAAACAATTGTTATCACATTATTATTATCAATATCAACTTATTCTCAAGTTGGTATTGCAACAACAACACCAACTGAAACTTTAGATGTAAACGGAACGGCAAGAGTTCGAAATTTGACAGATGGAACAATTCAAACAAACTCAACAGGTGTTTTATCAATTATGCCTAACATGAATAGTGTGTTTGATGAAAGCGTAGAGAATGGAGAGGTAAAGAAGTTCGTAAGAAGTAATCAGATATACGTATTTGAATAA

Genome Context

Tertiary structure

ASD53244.1
ColabFold structure
Source ColabFold
pLDDT 73.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Long-term genomic coevolution of host-parasite interaction in the natural environment Laanto,E., Hoikkala,V., Ravantti,J. and Sundberg,L.-R. — 28740072 GenBank