Protein
View in Explore- Genbank accession
- XTJ58296.1 [GenBank]
- Protein name
- long tail fiber protein proximal connector
- RBP type
-
TSP
- Protein sequence
-
MAEPILMAAFGEDFVETRILSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGDRFINFKTFDVTTDDNNANNKAFVEYANGLTSGLYIIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGKVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNESISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRASLRWFKGSSLLSSNVSLEVPKNGADRWLRFERFTAVPTDADGFTIVVSRYPKTSVVGDSKIKNLVFVQTSHSEKLNSVVQEFGVNGIRMNKGVEGGTTMIMELPNSKVDPSGVIPVQSFRETSD
- Physico‐chemical
properties -
protein length: 378 AA molecular weight: 41835,30470 Da isoelectric point: 5,62782 aromaticity: 0,11111 hydropathy: -0,35873
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
XTJ58296.1
1
378 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 143 | 143 | 0,3823 |
| Central domain | 144 | 367 | 225 | 0,4803 |
| C-terminal | 368 | 378 | 10 | 0,2360 |
Note: Constraints were applied during segmentation.
Fixed 15 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 15 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Phage
Klebsiella phage 15882-6-3
[NCBI]
· taxon 3373945
Host
No host information
Coding sequence (CDS)
Genbank protein accession
XTJ58296.1
[NCBI]
Genbank nucleotide accession
PQ537379
[NCBI]
CDS location
range 55618 -> 56754
strand +
strand +
CDS
ATGGCTGAACCAATTTTAATGGCAGCCTTCGGCGAGGATTTCGTGGAAACACGAATCCTCTCTGAGGCAAACTCTGTGAAGTATTGGCTAAAAGCTTATGCTACGCATTCTAATGCTGTTCCGAATAAGCCAGAATTGAATATTAACGGTGCCTTTGATATGACCTCCTCCTTACGGAGGGGGATTAATGTTGTTCAAGTTAATGGTGACAGGTTTATTAACTTTAAAACATTTGACGTTACCACTGATGATAACAACGCTAATAACAAAGCGTTTGTAGAATATGCAAATGGATTAACTTCGGGATTGTATATTATAATGACACATGAACGATTTCAATCCAGCCCGCTAATAGACAGGTGGTTTAAAAATAAGTGGTCTGCTTCTTGGCCAGGTTCTGATTTTTCCAAATCATTTCCAAACTCTGCTTATGTAGGAGTGCTCGGAGCAGCAAAAGGACGCATATTAATTGAGTCATTTTACGGAAATGATGGAAAGGTTAAAGAAGATTCCAGAGCTAAAGTCGATACTGTATATGATAACGTTGGCGATGTAGGATATACAGGCTGCCCTTATCGTTCCATTGAAGACACTAATGAGTACTCGGATTCTACTGGATATGAATATAAGCGATATCCAGTTCAAAATGAATCTATAAGCAAAATAGCTGATTATGGACTATCTCCTGGGGATTCTGTATTTTTAGTATGTGATATGTATGCATCTAAAAGTCTTCTTGATGCTGGTTCTACTACTAGAGCTAGCCTGCGATGGTTCAAAGGCTCATCTTTATTATCTTCAAACGTATCATTAGAAGTTCCAAAAAATGGAGCTGATAGATGGTTAAGATTTGAAAGATTTACCGCTGTTCCTACAGACGCTGATGGATTTACTATTGTGGTATCAAGATATCCAAAAACGTCTGTAGTTGGTGACTCTAAAATCAAAAACCTTGTATTTGTTCAAACCTCTCATAGCGAAAAACTGAATAGTGTTGTTCAAGAATTTGGTGTGAATGGTATAAGAATGAATAAAGGCGTTGAAGGAGGAACCACTATGATTATGGAACTTCCAAATTCAAAAGTCGATCCGAGCGGTGTTATTCCAGTTCAATCGTTCAGAGAAACATCAGACTAA
Genome Context
Tertiary structure
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Phage training: Klebsiella pneumoniae | Burke,K.A., Filippov,A.A., Nikolich,M.P. and Peters,T.L. | 1997-09 | — | GenBank |