Phage RBP Database

Genbank accession

DBB24750.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,59

Seq2Symm

C1 confidence 0,998

C1	0,998
C2	0,002
C3	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MNENDIISKLEDLKSIKQTDINETTKALQTYQAGLKQDLVDTYSQYCPTKKRIRLLKNQNIYQGIMFQEVIVGANDEIIKYGDIFVSGGNATTSGAGRVPITAGFARVAIPQGVEIIDVIGGHANFFAQVKDSADMWVWGNNSEGCLGVGHNNAVPIPTKVTMSAKIKQIRSMSYLSANQFCTILLEDGSVWSCGRNAEGQLGIGNTINSNRFVRVSVLEDIEEIWSGNNFVSGVFAKKGSKTYVWGWNGNGCLGLGKTNTPILAPELHPLANINKVYHYCLDWSGWKGLTYFEAGNAFYHAGFNGGRESGLDGGLGDNLSATEVFSSGIKASDQFVSSGIYGTALLLNSNHNVWSWGYGQFGFGENRTGNSLTQSLYAGVSFKSIHCKPYNQNAFYAQDFNGDLWSFGYNNYALGIGNATDTRVWTKLPTPPNIIDYDVCSYYGTERVFIATDGERLYACGVTLSWNLNYTTNVLQPQILPLGEPK

Physico‐chemical properties

protein length:	487 AA
molecular weight:	53346,22170 Da
isoelectric point:	5,85882
aromaticity:	0,11704
hydropathy:	-0,22444

Domain architecture

DBB24750.1

1 487 aa

STR 38–281 · STR 284–486 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR009091
STR

IPR009091 IPR009091

IPR009091
STR

IPR009091 IPR009091

IPR051553
Unmapped

IPR051553

IPR000408
STR

IPR000408

IPR000408
STR

IPR000408 IPR000408

DBB24750.1

1487 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1778
STR

DC_1778

DBB24750.1

1487 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009091	STR	IPR009091	38	281	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	82	270	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR051553	Unmapped	-	109	266	InterPro	Ran GTPase-activating	-	-	-	-
IPR000408	STR	DC_0062	134	189	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	136	170	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	188	231	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR009091	STR	IPR009091	284	486	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	337	473	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

DBB24750.1

1 487 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	328	328	0,1614
Central domain	329	476	149	0,1232
C-terminal	477	487	10	0,9824

Note: Constraints were applied during segmentation.
Fixed 23 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacteriophage sp [NCBI] · taxon 38018

No lineage information

Host No host information

Genbank protein accession

DBB24750.1 [NCBI]

Genbank nucleotide accession

BK070149 [NCBI]

CDS location

range 21517 -> 22980
strand -

CDS

ATGAATGAAAATGACATCATCTCAAAATTAGAAGATTTGAAAAGTATCAAGCAAACCGACATTAACGAAACAACCAAAGCCTTACAGACCTATCAGGCAGGATTAAAACAAGATTTAGTAGATACCTATTCCCAATATTGCCCCACTAAAAAAAGAATCCGCCTTTTAAAAAATCAAAACATCTATCAGGGCATTATGTTTCAAGAAGTGATTGTGGGGGCTAATGATGAGATTATTAAGTATGGGGATATCTTTGTTTCAGGAGGCAATGCCACTACAAGCGGTGCAGGAAGAGTTCCGATTACAGCAGGATTTGCAAGAGTAGCCATCCCCCAAGGCGTAGAGATTATTGATGTGATTGGCGGACACGCCAACTTCTTTGCTCAAGTTAAGGATTCTGCTGATATGTGGGTATGGGGCAATAATTCAGAGGGTTGTTTAGGTGTGGGGCATAACAATGCCGTCCCAATCCCTACTAAAGTTACAATGAGTGCTAAAATCAAACAAATCAGGTCAATGAGCTATCTCTCAGCCAATCAATTCTGCACCATTCTTTTAGAAGATGGGAGCGTATGGAGTTGTGGGAGAAATGCAGAAGGACAACTCGGCATTGGCAATACGATTAATTCCAATCGCTTTGTTAGAGTCTCTGTTTTAGAAGATATTGAAGAGATTTGGAGTGGGAATAACTTTGTGAGTGGGGTCTTTGCTAAAAAAGGCTCTAAAACATATGTTTGGGGATGGAATGGGAATGGGTGCTTGGGCTTAGGTAAAACCAACACCCCCATCTTAGCCCCTGAACTCCACCCGCTAGCCAATATTAATAAAGTTTATCACTACTGCTTAGATTGGAGCGGATGGAAGGGACTAACGTATTTTGAAGCAGGAAATGCCTTTTATCACGCAGGATTTAACGGAGGTAGAGAAAGTGGTCTTGATGGAGGATTAGGCGACAATTTAAGTGCTACTGAAGTCTTTAGTAGTGGTATTAAAGCATCCGATCAGTTTGTCAGTAGTGGCATCTATGGCACAGCCTTACTCTTAAATTCGAATCATAACGTATGGTCTTGGGGTTATGGGCAGTTTGGATTTGGAGAAAATCGCACAGGAAACTCTTTAACTCAAAGCTTATACGCAGGTGTCTCTTTCAAATCCATTCACTGCAAACCCTATAATCAAAACGCCTTTTATGCTCAAGACTTTAACGGCGATCTTTGGAGCTTTGGTTATAACAACTATGCCTTAGGGATTGGCAATGCTACTGATACAAGAGTCTGGACTAAACTACCGACCCCTCCTAATATCATTGATTATGATGTTTGCTCCTACTATGGAACAGAGAGAGTCTTTATTGCCACTGATGGAGAGCGTTTATATGCCTGTGGCGTCACTCTTAGCTGGAATCTCAACTATACCACGAATGTCTTGCAACCCCAAATCTTACCCTTAGGAGAACCCAAATGA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)