Protein

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Genbank accession
AOO12919.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,53
Seq2Symm
D3 confidence 0,854
D3 0,854
C3 0,726
C1 0,026
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAVNNNYSKVRSHYGGYIGSIQVHSTPYLANINDPNGANFQEHVPAGYLKCDGSIKNAQEFVALSQILGVGQNSKFRKTNVDLREADQDTGDLGQFQLPDLGSKVIIPSRSVGDYLNTFVGDTEETRVGPAVEVLCNEGTQLTCDFIGNFRGIPVETSYDFRSSPKYQFETTSQSAFLDIENFQGHAHNANTNYLNYTTNHAVGGDGKDGGNASGNSGAGNALEQSEANTTALSSHTHRITKPTQYIHNFQYQHQPFDIPADNVNTTLNVSVENINKLDAVVTPFIIVTYIIKI
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32101,87220 Da
isoelectric point:5,27491
aromaticity:0,09184
hydropathy:-0,45986

Domains

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No domain architecture available.

Taxonomy

Phage
Cyanophage S-RIM44 [NCBI] · taxon 1278485
Uroviricota Caudoviricetes Pantevenvirales Vellamovirus Vellamovirus rhodeisland44
Host
Synechococcus [NCBI] · taxon 1129
cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae
Host
Synechococcus sp. [NCBI] · taxon 1131
cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

Coding sequence (CDS)

Genbank protein accession
AOO12919.1 [NCBI]
Genbank nucleotide accession
KX349297 [NCBI]
CDS location
range 36752 -> 37636
strand +
CDS
ATGGCAGTCAACAATAACTATTCTAAAGTCAGGTCACACTATGGTGGTTACATTGGATCTATTCAGGTTCATTCAACTCCATACCTTGCAAATATAAATGATCCCAACGGAGCAAATTTTCAGGAGCATGTTCCTGCTGGTTATTTGAAGTGTGATGGATCTATTAAAAATGCACAGGAGTTTGTTGCACTATCACAAATCCTAGGTGTGGGTCAAAACTCTAAGTTTAGAAAAACAAATGTAGATCTTAGAGAAGCAGATCAAGACACAGGAGACCTAGGACAGTTTCAGTTACCTGATCTTGGATCTAAAGTTATTATTCCATCTAGATCAGTTGGTGACTACTTGAATACTTTTGTTGGTGATACTGAAGAGACTAGAGTTGGACCTGCCGTTGAGGTTTTATGTAACGAAGGAACACAGTTGACATGTGATTTTATTGGTAACTTTCGTGGAATACCAGTAGAGACATCATATGATTTTAGATCTAGTCCTAAGTATCAGTTTGAGACTACATCACAGTCGGCATTCCTAGATATTGAGAACTTCCAAGGTCATGCTCACAATGCAAACACAAACTATCTAAACTACACTACAAACCATGCTGTTGGTGGTGATGGTAAAGATGGTGGTAATGCTAGTGGTAACTCTGGAGCAGGAAATGCTTTAGAACAGAGTGAAGCTAATACTACAGCACTATCATCACACACTCATAGAATTACAAAACCAACACAATATATTCATAACTTTCAATATCAGCATCAACCATTTGATATTCCTGCAGATAATGTCAATACTACATTGAATGTATCTGTCGAAAATATCAATAAACTTGATGCTGTAGTTACTCCTTTTATTATTGTCACATACATCATCAAGATCTAA

Genome Context

Tertiary structure

AOO12919.1
ESMFold structure
Source ESMFold
pLDDT 47.5
Oligomeric state monomer
Download structure