Phage RBP Database

Genbank accession

CAO2432716.1 [GenBank]

Protein name

central tail fiber J

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,96

Seq2Symm

C3 confidence 0,903 truncated

C3	0,903
C1	0,395
D3	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTIVYSVTGHKGGGGKQHTPQETPDSLHSLAKIRILLALGEGEFEGIPSTAELRKRVYLDGTPIMNEDNSENFPGARVEFRPGTQHQDVIHGFSAVESESSVNVKLEQGTPWVRQITDTSLDAVRIRIGIPALYTNEENGDLVGGRIDYKIVVYTDNADPREFNFAAVGKTMSLYERDHRIELPPNVNTSWRVEVHRITPDSTSAKVVNDIRVQSITEIVDARLRYPLTALLFVEFDAKAFQNIPRVSIKCKGRKVLVPNNYDPIAHTYSGDWDGTFKRAWTDNPAWHWYDICITERFGLGRRIKPQMLNRYALYQIAQRCDQKVSDGNGGQEIRFKNDMYIQSQTDAWTVLKDLAAIFAGMTWWGNQMLNIVSDQPVAAVSHTITNASVIDGRFDYASGSQKTRYSTFAVAYGNPANHYDDAIATGQRVELVRRHKINRLDITAIGCTRESEAQRRGHWALISNQLDQQVSFKVGMEGLFFIPGSVVAIADTNISGGFEIRGGRLLEDPGTRTVLNTDEEITFRPGDKFLVRTANGSVETRTISSVNGNKVTLSSALDADPIPFQPFCVDGDDIQVQKFRITDLEYDDATSTFSVRGIEYNDSKYDAVDNGARLDPGIFTQMPDGVLKGPESVTITPSQISSQGQLITNVDIVFPPVKDAVVYEIQWRRTSLQNMAVQWGNDWVNLPRTPSNGAHIPNVFSGNYQARVRAIGMGEISSPWVESVITPIEGRLGGLNAPIITAAVSGLHQILWKWNHNNAATDISYTELQVRKPGTEEWHFLTNVPYPGADYAQTSLEFGVYQQLRARVSDKIGNLSDWSAPFEGQVSDKVDDYMKGLDDEFLTSEDGKHFQEQIDTFPQGIYESMLTDAQQLFNARAEYKGIYAEIKVAYNVAADAHQAVAQLETLVGTRIDDAEAAIHTLQTAQSTHEQAFAQYQQTVSAKFGEQESAIQQVQTATSDVASALATYKTQVAAQFGQQSAAIEQKMTSTFNHSGGSATYSLKAGVTYNGTYYDAGMQLSVVASGNAVKSRIAFKADQFYIMHPSNGTLSSAFIVDGGQVYIDTARIKNASINFAQITDTLQSNNFAGGSRGWRILKNGQAEFNEVTVRGNLFATTGNFGFSGGTVTIDKTGVNVPLPGGGRVKVGTW

Physico‐chemical properties

protein length:	1148 AA
molecular weight:	126626,87750 Da
isoelectric point:	5,47549
aromaticity:	0,09321
hydropathy:	-0,35183

Domain architecture

CAO2432716.1

1 1148 aa

ATT 96–222 · ATT 344–501 · RBD 982–1118 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053171
Unmapped

IPR053171 IPR015406

IPR055385
ATT

IPR055385 IPR032876

CAO2432716.1

11148 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0014
STR

DC_0014

CAO2432716.1

11148 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	7	857	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	96	222	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	344	501	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR015406	RBD	DC_0135	982	1118	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAO2432716.1

1 1148 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	505	505	0,9117
Central domain	506	1081	577	0,0399
C-terminal	1082	1148	66	0,8751

Note: Constraints were applied during segmentation.
Fixed 39 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage KCP_071 [NCBI] · taxon 3465691

Viruses

Host No host information

Genbank protein accession

CAO2432716.1 [NCBI]

Genbank nucleotide accession

OZ346153.1 [NCBI]

CDS location

range 16668 -> 20114
strand +

CDS

ATGACTATCGTCTACTCCGTAACGGGCCATAAGGGTGGAGGCGGGAAACAGCACACCCCGCAGGAGACGCCTGATAGCCTGCACTCGCTGGCTAAAATCCGCATTCTGCTCGCACTGGGTGAAGGGGAATTTGAAGGCATCCCTTCGACAGCCGAGCTACGCAAGCGCGTCTACCTGGACGGCACGCCGATCATGAACGAGGATAACTCGGAAAACTTCCCTGGCGCACGCGTTGAATTTCGCCCCGGAACACAGCACCAGGATGTGATTCACGGATTTTCAGCCGTGGAAAGCGAGTCATCCGTAAACGTCAAACTGGAACAGGGGACGCCGTGGGTCCGTCAAATCACCGACACCAGTCTTGACGCGGTGCGCATTCGCATCGGTATTCCTGCGTTGTACACCAACGAGGAAAACGGCGATCTGGTGGGTGGGCGCATCGACTATAAAATCGTGGTGTACACCGACAACGCTGATCCGCGGGAGTTTAACTTCGCTGCCGTTGGTAAAACAATGTCGCTGTATGAGCGCGACCACCGCATTGAATTACCGCCGAACGTTAACACTAGCTGGCGCGTCGAAGTGCACCGCATTACGCCCGACTCCACCTCGGCGAAAGTGGTAAACGATATTCGCGTGCAGTCAATCACTGAGATTGTCGACGCCCGTTTGCGCTACCCGCTAACTGCGTTGCTATTCGTCGAGTTCGACGCGAAGGCTTTCCAGAATATCCCGCGCGTGTCTATCAAGTGCAAAGGCCGCAAAGTGCTGGTCCCTAACAACTACGACCCGATCGCGCATACCTATAGCGGCGACTGGGATGGTACCTTCAAGCGTGCATGGACGGATAACCCGGCGTGGCACTGGTACGATATTTGTATTACGGAACGTTTCGGACTCGGTCGTCGCATCAAGCCGCAAATGCTAAACCGCTATGCGCTTTACCAGATCGCCCAGCGCTGCGATCAGAAGGTTAGCGACGGCAACGGCGGACAGGAAATCCGGTTTAAGAACGACATGTACATCCAGTCGCAGACCGACGCATGGACCGTACTGAAAGACTTAGCCGCCATCTTCGCCGGTATGACCTGGTGGGGCAACCAAATGCTGAATATTGTCAGTGACCAGCCGGTCGCTGCGGTTTCGCACACCATTACTAATGCCTCCGTTATAGATGGGCGATTCGATTATGCGTCTGGCAGCCAGAAGACCCGCTATTCAACCTTTGCGGTGGCATACGGCAATCCGGCTAACCATTACGACGACGCAATCGCTACGGGCCAGCGTGTGGAACTGGTGCGCCGCCACAAGATTAACCGCCTTGATATTACGGCGATCGGCTGTACGCGTGAATCAGAAGCGCAACGCCGCGGGCACTGGGCGCTCATCTCAAACCAGCTTGATCAGCAGGTGAGCTTCAAAGTCGGCATGGAAGGTCTGTTCTTCATCCCCGGAAGCGTGGTAGCTATCGCAGACACCAATATTTCTGGCGGTTTCGAAATCCGCGGCGGGCGCTTACTGGAAGACCCCGGAACGCGCACGGTGCTTAACACCGACGAGGAAATTACATTCCGACCAGGTGATAAATTCCTGGTACGCACTGCGAACGGTAGTGTCGAGACTCGCACAATCTCAAGCGTAAACGGCAACAAGGTTACGCTATCAAGCGCACTTGACGCGGACCCGATCCCGTTCCAGCCGTTTTGCGTTGACGGTGATGATATTCAGGTGCAGAAGTTCCGCATCACCGATCTGGAGTATGACGACGCGACCAGCACCTTCTCGGTGCGCGGGATTGAGTACAACGACAGCAAGTATGATGCCGTTGATAATGGCGCTCGTCTTGACCCGGGCATCTTTACGCAAATGCCGGACGGCGTGCTGAAGGGGCCGGAATCCGTGACCATTACCCCGTCGCAGATTTCAAGCCAGGGCCAGTTAATCACCAACGTGGATATTGTTTTCCCGCCGGTGAAAGATGCCGTTGTCTATGAAATCCAGTGGCGAAGGACCAGCCTTCAGAATATGGCGGTGCAGTGGGGTAACGACTGGGTAAACCTGCCTCGCACGCCGTCAAACGGTGCGCACATCCCTAACGTGTTTTCCGGTAACTACCAGGCGCGCGTCCGGGCAATCGGTATGGGTGAAATCTCATCCCCGTGGGTGGAATCTGTCATCACGCCGATTGAAGGTCGTCTCGGCGGTCTGAATGCGCCAATCATTACGGCAGCAGTGTCCGGTCTGCATCAGATCTTGTGGAAGTGGAATCACAACAACGCCGCTACGGATATTTCATACACGGAATTGCAGGTACGCAAGCCGGGTACTGAAGAATGGCACTTCCTCACCAACGTGCCGTATCCGGGCGCGGACTATGCGCAGACGTCGCTTGAGTTCGGGGTCTATCAGCAGTTGCGCGCACGCGTGTCTGATAAAATCGGCAACCTGTCAGACTGGTCAGCGCCGTTTGAAGGCCAGGTGAGCGATAAAGTCGACGACTACATGAAGGGACTCGACGACGAGTTTTTGACTTCGGAAGACGGTAAGCACTTCCAGGAGCAGATCGACACGTTCCCGCAAGGCATCTATGAGTCAATGCTCACTGACGCGCAGCAGTTGTTTAACGCCCGCGCCGAGTACAAAGGGATTTACGCCGAGATCAAGGTGGCTTATAACGTCGCTGCCGACGCACACCAGGCCGTCGCGCAACTGGAAACACTGGTAGGCACTCGTATTGACGACGCGGAAGCGGCGATCCACACGCTACAGACTGCACAGAGCACGCACGAACAGGCGTTTGCCCAGTACCAGCAAACTGTGTCAGCGAAGTTTGGCGAGCAGGAATCGGCGATTCAGCAGGTTCAGACGGCAACGAGTGACGTAGCCAGCGCACTGGCGACCTATAAAACACAGGTAGCCGCGCAGTTCGGGCAGCAGTCAGCCGCGATCGAGCAGAAGATGACGTCCACGTTTAACCACTCCGGCGGTAGCGCAACGTACAGCCTGAAAGCTGGCGTGACGTACAACGGGACGTATTATGATGCGGGTATGCAGCTTTCGGTTGTTGCATCAGGCAACGCGGTTAAATCCCGCATCGCGTTCAAAGCGGACCAGTTCTACATTATGCACCCGTCGAACGGCACGCTATCCTCGGCGTTCATCGTAGATGGCGGGCAGGTGTACATCGACACGGCACGAATCAAGAATGCGTCCATTAACTTTGCGCAGATCACGGACACATTACAGTCCAATAACTTCGCAGGAGGTAGCCGCGGGTGGCGAATCCTGAAGAACGGGCAGGCCGAGTTTAACGAGGTAACAGTCCGCGGCAACCTGTTCGCTACCACCGGTAACTTCGGATTCTCGGGCGGGACCGTGACAATCGACAAGACGGGTGTTAACGTGCCGCTACCAGGCGGCGGGAGGGTGAAAGTCGGAACGTGGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)