Protein
- Genbank accession
- BAM76797.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Seq2Symm
-
C3 confidence 0,548
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).C3 0,548 C1 0,028 C2 0,006 - Protein sequence
-
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPIDFTPKYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYKKSIDKNTDFVLDGVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
- Physico‐chemical
properties -
protein length: 274 AA molecular weight: 31203,68130 Da isoelectric point: 5,27627 aromaticity: 0,14234 hydropathy: -0,26022
Domains
Domain architecture
BAM76797.1
1
274 aa
STR 8–126 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
BAM76797.1
1
274 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 192 | 192 | 0,9448 |
| Central domain | 193 | 263 | 72 | 0,1123 |
| C-terminal | 264 | 274 | 10 | 0,2588 |
Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Coding sequence (CDS)
Genbank protein accession
BAM76797.1
[NCBI]
Genbank nucleotide accession
AP012341
[NCBI]
CDS location
range 35419 -> 36243
strand +
strand +
CDS
ATGCAATCTTTTGTAAAAATCATAGATGGTTACAAGGAAGAAGTAATAACAGATTTTAATCAACTTATATTTTTAGATGCAAGGGCTGAAAGTCCTAACACTAATGATAATAGTGTAACTATTAACGGAGTAGATGGTATTTTACCGGGCGCAATTAGTTTTGCGCCTTTTTCATTAGTATTAAGGTTTGGCTATGATGGTATAGATGTTATAGATTTAAATTTATTTGAGCATTGGTTTAGATCTGTATTTAATCGTAGACATCCTTATTATGTTATTACTTCTCAAATGCCTGGCGTTAAATACGCAGTGAATACAGCTAATGTTACATCTAATTTAAAAGATGGTTCTTCAACTGAAATTGAAGTAAGTTTAAATGTTTATAAAGGATATTCTGAATCAGTTAATTGGACTGATAGCGAGTTCTTATTCGACTCTAATTGGATGTTTGAAAATGGAATTCCTATTGATTTCACACCTAAATATACTCATACATCAAATCAATTCACTATTTGGAACGGTTCTACTGATACGATAAATCCACGATTCAAGCACGATTTAAAAATATTAATTAATTTAAATGCGAGTGGAGGATTTGAACTGGTTAACTATACAACAGGTGATATTTTTAAATACAAGAAAAGCATAGATAAAAACACTGATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTCGGAATTGATACAAATAGGGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTCAGTGATATTAAAACAACATTTAAGTTTCCTTTTATTTATAGGTAG
Genome Context
Tertiary structure
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Molecular characterization of methicillin-resistant Panton-valentine leukocidin positive staphylococcus aureus clones disseminating in Tunisian hospitals and in the community | Mariem,B.J., Ito,T., Zhang,M., Jin,J., Li,S., Ilhem,B.B., Adnan,H., Han,X. and Hiramatsu,K. | 2013 | 23289889 | GenBank |