Protein

View in Explore
Genbank accession
YP_002922590.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,77
Seq2Symm
C3 confidence 0,998 truncated
C3 0,998
D3 0,031
C1 0,006
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MATLKQIQFKRSKVAGVRPTPAQLAEGELAINLKDRLLFTKDDTGAIIDLGFAKGGNIDGNVIHNGNYNQTGDYTLTGVFTQIGDFNLNGIARVTRDIIAAGQIMTHGGELISKSASTSHLRFFDGNDRERGIIFSPNNAGATNQIVNIRVQDYSTASESTYAFSGNGLFSSPEVFGWKSVSTPVIYTNKVITNGKVAGDYDISSLSNNTPLAESETAINHLRVMRNAVGAGIFHEVNVNDGIAWYSGDGLDTYLWSFTWSGGLKAGHSISVGLPGGPKGYSELGTASIALGDNNTGLKWKQDGQFHTVNNGAYTLLTTPTEVTSLKQLVAGYSTNGSDLILPTTQNYPLVIVNTTNDKNGFGDGQTLLGYHQSGKYHHYFRGKGVTNVNTDGGLLVTPGNVEVRGGSVNIDGRGNASTVLFKGSTSGYSSVDNIELKGWGDTFNTVGGSRKNVLETSDATGWMHYIQRNTAGKVESYLNGTMNIAEGLSVSQDTSLKRNLYVSNEIKVRAASGLRIWNDKYGVIFRNSEDQLHIIPTNVNAGESGGLGPLRPLSIMLDTGRVKIPNLEADQVSFKGTGVLEFPNSSGASYANQNTTKAPLYQALDAATQAFYPITKQKNVDSNVTVTQGMDRATSEYRIVAQGDLLGDGDATGLKYWRFTKEGNFMAQNRLYAGTAFMNTDGNIAGSIWNKYSGATNLDAAVSTRVAKEGDTMTGRLTLKTNSDAIVIDYPADEAGYVKGKKGGVDNWYVGNGGADNGLAFWSFQSQGGINITHNGEVVLSPQGASVFNINRDRIYMNGSNWIAHKSGAWGDQWGLEAPYFLEFGSVGEDSYYPIIKGRSVISGQGYTTSVELGMRRTPQAWGQAIIRVGNAERGDGPVGIFEFHSSGLFYAPTLVQTPAIGVGTVNGLGSPSIAIGDNDTGLVHGGDGRINMVANGIHIASWSSSYHIHEGLWDTTGALWTEQGRAIMSYGHLVQANDSYSTYVRDVYVRSDIRVKKDLVKFENASQKLSKINGYTYMQKRGLDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKALVKSLLK
Physico‐chemical
properties
protein length:1103 AA
molecular weight: 118674,63620 Da
isoelectric point:5,83716
aromaticity:0,08885
hydropathy:-0,32149

Domains

View on InterPro
Domain architecture
YP_002922590.1
1 1103 aa
ATT 449–556 · STR 725–780 · CHP 993–1091 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_002922590.1
1 1103 aa
Domain Start End Length (AA) Confidence
N-terminal 1 611 611 0,0899
Central domain 612 810 200 0,2707
C-terminal 811 1103 292 0,8774
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage JS10 [NCBI] · taxon 576790
Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Dhakavirus
Host
Escherichia coli K-12 [NCBI] · taxon 83333
Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia

Coding sequence (CDS)

Genbank protein accession
YP_002922590.1 [NCBI]
Genbank nucleotide accession
NC_012741 [NCBI]
CDS location
range 157475 -> 160786
strand +
CDS
ATGGCTACTTTAAAGCAAATCCAATTTAAAAGAAGTAAAGTGGCCGGTGTACGTCCGACACCGGCCCAGTTGGCTGAAGGCGAACTGGCTATTAACTTAAAGGACCGTTTACTTTTTACTAAAGACGATACTGGAGCGATTATCGACCTTGGCTTTGCTAAAGGTGGTAATATCGACGGAAACGTTATTCATAACGGTAACTACAACCAGACCGGCGATTACACTCTTACGGGTGTATTTACTCAAATAGGTGATTTTAATCTCAACGGTATTGCTCGCGTAACTCGTGATATTATTGCTGCAGGTCAGATAATGACACACGGTGGCGAACTTATTTCTAAGAGCGCCTCAACTTCTCACCTTCGTTTCTTTGACGGTAATGATCGCGAACGTGGCATTATTTTTTCTCCTAATAATGCAGGAGCAACCAACCAAATAGTTAATATTCGCGTACAGGATTATTCTACTGCAAGCGAAAGCACTTATGCATTTTCAGGTAATGGTTTATTTTCTTCTCCTGAAGTTTTTGGATGGAAATCCGTATCAACTCCAGTAATTTATACTAATAAAGTTATTACCAATGGTAAAGTTGCTGGCGATTACGATATATCTTCATTATCAAATAACACTCCATTGGCAGAAAGCGAAACGGCTATTAACCACCTCCGTGTTATGCGAAATGCTGTAGGAGCAGGTATTTTCCACGAAGTTAATGTTAATGACGGAATAGCCTGGTATTCCGGAGATGGCTTAGACACTTATCTTTGGTCGTTTACCTGGTCCGGTGGATTGAAAGCCGGTCATTCTATTTCTGTAGGTCTTCCAGGTGGCCCTAAAGGATATTCTGAATTAGGGACGGCTTCAATTGCTCTTGGTGACAATAACACTGGTTTGAAATGGAAACAAGACGGCCAGTTCCATACAGTTAATAATGGAGCTTATACTTTACTTACAACTCCGACTGAAGTTACAAGCCTTAAACAGTTAGTTGCGGGTTATTCAACCAACGGTTCTGATTTAATTCTTCCTACAACTCAAAACTATCCATTAGTTATTGTTAATACTACTAATGATAAAAACGGCTTCGGCGACGGTCAAACTCTTTTAGGTTATCACCAAAGCGGTAAATATCACCATTATTTTCGTGGTAAAGGCGTAACAAACGTTAATACCGATGGTGGGTTGTTGGTTACTCCTGGTAACGTTGAAGTCCGTGGTGGTTCTGTTAATATTGACGGTCGTGGTAACGCTTCCACTGTGCTTTTTAAAGGAAGTACCTCAGGATATAGTTCAGTTGATAATATAGAGCTCAAAGGTTGGGGTGACACTTTTAATACGGTAGGTGGTTCTCGTAAAAACGTATTGGAAACATCTGATGCTACCGGCTGGATGCACTATATTCAACGAAATACGGCAGGTAAAGTCGAATCTTATTTAAACGGCACGATGAACATCGCCGAAGGATTGTCTGTCAGTCAAGATACATCCTTAAAACGCAATCTGTATGTTTCCAATGAAATTAAAGTCCGCGCTGCTAGTGGTCTTCGTATTTGGAATGATAAGTATGGTGTTATTTTTCGAAATTCAGAAGACCAGCTGCATATTATCCCAACCAATGTTAATGCTGGTGAAAGTGGCGGATTAGGTCCATTACGCCCATTAAGTATTATGCTAGACACCGGTCGGGTTAAAATCCCTAACTTAGAAGCAGACCAGGTTTCTTTTAAGGGCACCGGTGTATTGGAATTCCCTAATAGTAGCGGCGCATCTTATGCCAACCAGAACACGACTAAAGCTCCGTTGTATCAAGCACTTGATGCTGCAACTCAAGCATTTTACCCTATTACTAAGCAGAAAAATGTTGATTCGAACGTAACTGTTACTCAAGGTATGGACCGAGCTACAAGTGAATATCGAATTGTTGCTCAAGGTGATTTGCTTGGTGATGGTGATGCTACAGGATTAAAATATTGGCGCTTTACCAAAGAAGGTAACTTCATGGCTCAGAACCGCTTATATGCAGGTACAGCTTTCATGAATACTGATGGTAATATTGCAGGTTCTATTTGGAACAAGTATAGCGGTGCTACTAACCTTGACGCAGCGGTGAGTACTCGTGTGGCTAAAGAAGGCGACACAATGACAGGCCGCTTAACTCTTAAAACCAATTCAGACGCTATTGTTATTGATTATCCGGCAGATGAAGCTGGTTATGTTAAGGGTAAAAAAGGTGGTGTTGATAACTGGTATGTAGGTAATGGTGGTGCTGATAACGGTTTAGCCTTCTGGAGCTTCCAATCCCAAGGTGGTATTAATATCACCCATAATGGTGAGGTTGTTTTATCTCCACAAGGTGCTTCAGTATTCAATATAAACCGAGACCGTATTTATATGAACGGTTCCAACTGGATTGCACATAAATCTGGTGCATGGGGTGACCAATGGGGCTTAGAAGCACCTTATTTCCTTGAGTTTGGTAGTGTGGGTGAAGACAGTTATTATCCCATTATTAAAGGCCGATCTGTAATTAGTGGTCAGGGTTATACTACTTCTGTTGAATTAGGCATGCGTCGTACTCCACAAGCATGGGGACAAGCGATAATTCGAGTAGGTAATGCCGAGCGTGGCGACGGTCCTGTAGGTATTTTCGAATTCCACTCTAGCGGTTTATTTTACGCCCCGACTTTAGTCCAGACTCCTGCCATTGGTGTTGGTACTGTTAACGGATTAGGCTCTCCTAGTATTGCTATCGGTGATAATGATACTGGATTAGTTCATGGTGGTGACGGCCGAATCAATATGGTTGCAAATGGTATACATATTGCATCTTGGTCTAGCTCTTACCATATCCATGAAGGTCTTTGGGATACCACTGGTGCTTTGTGGACTGAGCAAGGAAGAGCTATTATGTCTTATGGTCATCTTGTTCAGGCAAACGACAGCTATTCTACATATGTCCGTGATGTTTATGTCCGTTCTGATATTCGCGTTAAAAAAGACCTCGTTAAATTTGAAAATGCTTCTCAGAAGCTTTCCAAAATTAATGGTTACACTTATATGCAGAAACGAGGCCTGGATGAGGAAGGTAATCAGAAATGGGAACCTAACGCCGGTTTAATTGCTCAAGAAGTTCAAGCTATTTTACCTGAATTGGTTGAAGGTGACCCTGATGGTGAAGCTTTACTTCGTTTAAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAGCATACTGCTGAAATAGCAGAATTGAAATCAGAGATTGAAGAACTTAAAGCTTTAGTTAAATCATTGTTAAAATAA

Genome Context

Tertiary structure

YP_002922590.1
ESMFold structure
Source ESMFold
pLDDT 53.6
Oligomeric state monomer
Download structure