Protein

View in Explore
Genbank accession
XKI62182.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MATNPTNKPIPSEDPRDLKHNAGKIDEFVASLAQQYTDRFGRAHYTIEGLKQLTLQQIYNLGWNLSGSFQDGGTVTSAGDILQDESTNIWYRWDNLKTLPKTVPPGSTPYSSGGTGNGKWMVVDVADVLRKDLAKPTGANLIGIHDTTVGEVLRQKVYIIAITGQSNAVGANKGGPNPANDKIVIWDGVTGGWGSSDYTQPPMSRSTPNGNNGNNNIALAFAHRLVDEHKAEKVFVIYDAVGGRPIEDWMGNGVNSERYAAIKNKVEAAFASQEIIATGKTEIDFLVFAQGEENSLTDTVTDYRTKLTTLDKQFRAESWMSDTTPMFIMGMSGLHMRYQVWQAQVDYCENYNRNCIYVNSAGLKTQYDVDYTGDYTHWLGESLWEHGYYRIWQALHELGVTHRQQLPPFYSRGVGIWNGDSVAISGFASLVSSGSTTKDFPKDGPAASHAISWGYQCTASNYSLAGGYQNTMNTGANYSVSWGRGNTFSAAAQFSSSFGYENTINAPYAFAAGRGHTIADQNCAALGAFSEYKTSLEDPVRFQVGTGTATASPKTGFAVFQSGRALFSGDLDFKNDNKHSVGTPSARASVIYSATPNINTSDIATKKVRGALTDAELRAWAKVPPTIFQMLESLDEKGDNARLHAGLIAQDVAAAFESEGLDPRRYALFCEDETFEEIFEPQIQTVKRQKRGPGVIKETGIVDGVEVTIERTVNDALQYTLDGNELIPLMEEIKETIMTPVRKSKGTRLGLRYIECLIFEAAYQRSIASRLEERLDKLENGD
Physico‐chemical
properties
protein length:782 AA
molecular weight: 85834,61530 Da
isoelectric point:5,38091
aromaticity:0,09847
hydropathy:-0,42442

Domains

Domains [InterPro]
G3DSA:2.10.10.80
63–135
G3DSA:2.10.10.80 IPR036514 IPR011049 IPR036388
IPR040775
68–123
IPR040775 IPR005181 IPR030392
SSF52266
158–427
SSF52266 cd10144
IPR030392
601–660
IPR030392
XKI62182.1
1 782
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CHRF_10034
[NCBI] 		3377761 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKI62182.1 [NCBI]
Genbank nucleotide accession
PQ336906.1 [NCBI]
CDS location
range 10064 -> 12412
strand +
CDS
ATGGCCACCAACCCGACCAATAAACCAATTCCGTCTGAAGACCCGCGAGACCTCAAACATAATGCGGGGAAAATTGATGAGTTCGTCGCGTCATTAGCTCAGCAATACACCGATCGTTTCGGTCGCGCCCACTACACGATTGAAGGTCTTAAACAGCTAACTTTGCAACAGATTTACAATCTTGGATGGAATCTTTCCGGGTCTTTTCAGGATGGCGGTACGGTTACGTCTGCTGGTGACATTCTACAGGATGAAAGCACTAATATTTGGTATAGGTGGGATAATTTAAAAACACTCCCAAAAACAGTCCCACCGGGGTCAACTCCATATTCTTCCGGAGGTACTGGAAATGGGAAATGGATGGTTGTTGATGTGGCTGATGTTCTCCGCAAGGACCTGGCTAAACCAACAGGAGCAAATTTAATTGGAATTCACGATACAACAGTAGGTGAGGTTCTGAGGCAAAAAGTTTACATCATTGCGATCACCGGCCAGTCAAATGCGGTAGGGGCAAACAAAGGTGGTCCAAATCCAGCCAACGATAAAATTGTTATCTGGGATGGCGTAACGGGAGGCTGGGGAAGCAGTGATTATACCCAACCACCAATGTCTCGATCCACCCCAAACGGGAATAACGGTAACAACAATATCGCGCTGGCATTTGCACACCGTCTTGTTGATGAGCATAAAGCCGAAAAGGTGTTCGTCATCTACGATGCCGTTGGCGGTCGTCCGATTGAGGATTGGATGGGCAACGGGGTTAATTCTGAACGATATGCAGCCATTAAAAACAAGGTTGAAGCCGCGTTCGCCAGCCAGGAAATCATCGCAACCGGTAAAACAGAAATTGATTTTCTTGTATTTGCACAGGGTGAAGAAAATTCCCTGACGGATACCGTAACGGATTATCGAACAAAACTTACAACACTGGATAAACAATTTCGCGCAGAAAGCTGGATGTCTGATACTACACCGATGTTTATCATGGGGATGAGCGGATTACACATGCGCTACCAGGTCTGGCAGGCGCAGGTTGACTACTGCGAGAATTATAACCGCAACTGCATCTATGTGAATTCTGCTGGGCTAAAAACACAATATGACGTTGATTATACGGGAGATTATACCCACTGGCTGGGAGAGTCATTGTGGGAACATGGCTATTATCGCATCTGGCAGGCGCTGCATGAGTTGGGTGTTACGCACAGGCAACAGCTACCCCCCTTCTATTCCCGTGGGGTGGGGATCTGGAACGGAGACAGTGTTGCCATCAGCGGGTTTGCCAGCCTGGTAAGTTCAGGTTCAACAACCAAAGATTTTCCTAAGGACGGACCAGCCGCCTCGCATGCTATCAGTTGGGGGTATCAGTGTACAGCTTCCAACTATTCGCTGGCTGGCGGCTATCAGAACACCATGAATACTGGAGCTAACTACTCTGTTTCCTGGGGAAGGGGGAACACCTTCAGCGCAGCCGCGCAGTTCTCATCTTCATTTGGATATGAAAACACAATTAATGCGCCCTATGCATTCGCTGCCGGGCGTGGGCACACAATCGCTGACCAGAACTGTGCGGCGCTGGGAGCATTTTCTGAATACAAAACGTCACTCGAAGACCCGGTGCGGTTTCAGGTGGGGACAGGAACCGCTACCGCGTCACCAAAAACTGGTTTTGCCGTGTTTCAATCAGGGCGCGCTCTGTTTTCAGGTGATCTCGATTTCAAAAATGACAACAAACACTCCGTTGGCACTCCTTCTGCGCGTGCGTCTGTAATTTATTCGGCGACACCAAACATCAACACATCAGATATTGCGACCAAAAAGGTGCGCGGAGCTTTAACCGATGCTGAATTACGGGCATGGGCTAAGGTGCCGCCGACAATTTTCCAGATGCTTGAATCACTGGATGAAAAGGGTGATAACGCGCGACTGCACGCAGGTCTGATTGCGCAGGATGTTGCGGCGGCTTTTGAATCTGAAGGACTGGACCCGCGACGTTACGCTCTGTTTTGCGAAGACGAAACGTTTGAAGAGATATTCGAACCACAGATTCAGACAGTCAAACGTCAGAAACGAGGACCTGGCGTTATCAAAGAAACTGGCATTGTCGACGGAGTGGAAGTTACAATTGAGCGCACCGTAAACGACGCGCTCCAGTACACGCTGGATGGAAACGAACTCATCCCGCTAATGGAGGAGATAAAAGAAACAATAATGACCCCCGTGCGTAAATCAAAGGGGACTCGTCTTGGTTTGCGTTATATAGAGTGCCTTATTTTTGAGGCTGCGTATCAGCGTTCAATAGCCTCAAGGCTTGAAGAACGCCTTGATAAACTAGAGAATGGCGATTGA

Tertiary structure

PDB ID
6da3bb7ccc45683c1c77fdaa41e54918bb050dcc1b47c3c7538564f87c30db50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7859
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of bacteriophages that infect Salmonella Typhi from Bangladesh Islam,S., Kabiraj,R., Sarkar,H., Dev,P.C., Tanni,A.A., Keya,D.P., Malakar,A.R., Tanmoy,A.M., Saha,S.K., Hooda,Y. and Saha,S. — — GenBank