Phage RBP Database

Genbank accession

QBX18290.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,56

TF

Evidence RBPdetect2

Probability 0,64

Protein sequence

MDLIIHDAKLKKVAYIDNELQDTLSFYDDKWSRYLDTASSTFEFTVYKNGIKSDTVKQKAYQTLTERSFVSFKYNKRTYLFNVMKTEETETTIRCYCENLNLELLNEMAGPYKAKTEMSFVEYCNTFFLLVGGAITIGHNEIEDRERTLEWTGTDTKLKRLLSIANQFDAEIEFETILDEDSSLKSFILNIYKENDDKNQGVGKVRQDVVLRHGHNITGVKRTIDKTGIFNMITPVGKATVDVKVTKANPKYVAPKLNAVTYSGGSLSNGGRTISKSLVNEILNLCVQHKLLPSGVFSQMYLESFWGNSPVARADNNWGGLTWTGSTTRPSGIKVTQGTARPANEGGYYMHFASVSDYMKDYTYLLAEQGIYKVKGANNIDAYTKGLFRVGGAAYDYAAAGYGHYAPLMRSIRGGINSASNGAMDTLDNQFKTAGTVGTAPVSQIATKTKDALAQLGAIKGQRVGSGQCYALSALYSLKLGGAGLGGGVTGFRGVRPGGGAAASHIGEDYNWDQFGWKVVRPSEVKHLIPGSIANIRANAGSPVYTGGWGHTVVIKALSGDTLTVYEQNFAGHQYVEERTYSASAYLGVIQTLVYPPEIVQGKRIDGTESAPVQSGTPGNNEPKTISETQQQEKTVGIPNDLYREWKNEDGVVEFYIKNGSIYAPISKELYPSAFSGEEVSDNWIKKSVEYETIDIEQIISYSLQDIRKNCYPSISYEVKGTDENLDMGDTVKIDDEEFPEGLVLSARVSEQHISFTNDSTNQTIFDNYKALKNKLSKDLIDRYEELAEQAKPYELRLLTDKGTQFKNSTGLSVLTAELWKNNKQYDATFQFRNFDTLLASGLTYTVDGSTIPIDKPFLISVDAFIGNDLVATKQITFTNVTDGTDGIGIKSSSVMHGISTSATVQPTNWTEAMPVAKQGEYLWKRKITDYTDPSKPDTIELTYSYQGKNGSAGTSVSVTKIEYQVGTSGTTAPTGTWSTAIPSVPDGQFLWSKTTMSDNSVIYGINKQGAKGDKGDTYYPHTAWANSEDGKVDFSTTESKGRRYKGDYSDTNVAGSPDPTKYKWVDMVGGVESGGTNVYSIAGNATIGKSHISDLNMDISTGVIRFVASGPDPFIGVVRSHPFVYNNVYGIKIPVVAGKDIAVTITNPKITKNYVSYFTNDGKTVKQYKGYFASKFIIPKPELAGVDFITMRIGAGSSNVSIGDVFETKIQAEYGNIYSDWSPADEDVRANIDTKADQALTQDQLNLLLETQNLMTAEMKSKATAEQADSLLATVNKILSDSAITGADTEAKLIANAERIEAFRKDFDDKMVQLDFVSNYMRVTDLGFEISANDGSSSLLIQKDRISMLSAGKEVMYISQGLIHIDNGVFTKTLQIGNFRESQADGDPTTNLEIYVG

Physico‐chemical properties

protein length:	1398 AA
molecular weight:	153512,11630 Da
isoelectric point:	5,39819
aromaticity:	0,09800
hydropathy:	-0,38269

Domain architecture

QBX18290.1

1 1398 aa

RBD 275–410 · STR 411–595 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR002901
ENZ

IPR002901 G3DSA:3.90.1720.60

G3DSA:1.10.530.10
RBD

G3DSA:1.10.530.10 IPR007921

IPR002901
ENZ

IPR002901

QBX18290.1

11398 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0558
ATT

DC_0558 DC_0921

QBX18290.1

11398 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR002901	ENZ	DC_0048	266	403	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	275	410	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR002901	ENZ	DC_0048	285	393	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:3.90.1720.60	STR	G3DSA:3.90.1720.60	411	595	Merged direct domain	G3DSA:3.90.1720.60	Central	Low	Positional only	18 proteins / 18 hits
IPR007921	ENZ	DC_0404	444	594	InterPro cluster	CHAP domain	C-terminal	High	Text match	2 proteins / 2 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QBX18290.1

1 1398 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	271	271	0,9845
Central domain	272	476	206	0,6063
C-terminal	477	1398	921	0,0318

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Streptococcus phage Javan407 [NCBI] · taxon 2548153

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Streptococcus parauberis [NCBI] · taxon 1348

cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Genbank protein accession

QBX18290.1 [NCBI]

Genbank nucleotide accession

MK448753.1 [NCBI]

CDS location

range 29739 -> 33935
strand +

CDS

TTGGATTTAATTATTCATGACGCAAAATTAAAAAAAGTTGCATATATCGATAACGAATTACAAGACACCTTGTCTTTTTATGACGACAAGTGGTCACGTTATTTGGATACTGCATCATCAACATTTGAATTTACCGTTTATAAAAATGGTATTAAATCAGACACAGTAAAACAAAAGGCCTATCAGACACTAACTGAAAGGTCTTTTGTTTCGTTTAAATATAACAAGCGAACGTATTTGTTTAATGTGATGAAAACAGAAGAAACAGAAACAACAATTAGATGTTACTGTGAAAACCTCAATCTCGAGTTGCTAAACGAAATGGCTGGTCCATATAAAGCAAAAACTGAGATGTCATTTGTAGAGTATTGTAACACGTTCTTTTTATTAGTGGGTGGCGCTATAACTATTGGTCACAATGAAATTGAAGATCGTGAGCGTACTCTTGAGTGGACTGGAACAGATACTAAGTTAAAACGTTTGTTGTCTATTGCTAATCAATTTGATGCAGAAATTGAATTTGAAACTATTTTGGATGAAGATTCTAGCTTGAAATCATTCATTCTTAATATTTATAAAGAAAATGACGATAAAAATCAAGGCGTTGGTAAGGTTCGTCAAGATGTCGTTTTAAGACATGGTCATAATATTACAGGTGTAAAACGCACAATTGATAAAACTGGTATTTTTAACATGATTACACCAGTCGGAAAAGCTACAGTTGACGTTAAAGTCACAAAAGCGAATCCCAAATATGTAGCACCTAAATTAAATGCAGTCACTTATTCAGGCGGTTCACTTTCAAACGGTGGACGGACAATTTCCAAAAGTCTTGTAAATGAAATTTTAAACCTTTGTGTCCAACATAAGTTATTACCGTCTGGTGTATTTTCTCAAATGTACCTTGAATCATTCTGGGGTAATTCCCCAGTCGCTCGAGCTGATAATAACTGGGGTGGATTAACATGGACTGGCTCAACGACTAGACCATCTGGTATTAAAGTTACGCAAGGTACTGCACGTCCAGCTAACGAGGGCGGTTATTACATGCACTTCGCAAGTGTGTCGGACTACATGAAAGACTACACTTACTTATTAGCTGAGCAAGGTATTTACAAAGTAAAAGGTGCTAACAACATTGATGCTTATACAAAAGGTCTATTCCGTGTTGGTGGGGCGGCTTACGATTATGCAGCAGCTGGATATGGTCATTATGCACCATTAATGCGGTCAATTCGCGGTGGTATTAACAGTGCATCAAACGGTGCTATGGATACACTCGATAATCAATTTAAAACAGCTGGCACTGTTGGGACTGCACCAGTAAGTCAAATAGCAACCAAAACAAAAGATGCATTAGCTCAACTTGGAGCAATTAAAGGTCAACGTGTTGGATCTGGTCAATGTTACGCTTTATCAGCCTTGTACTCACTTAAATTAGGTGGGGCAGGCCTTGGCGGTGGAGTTACTGGGTTTAGGGGGGTGAGACCCGGTGGAGGTGCCGCCGCCTCACATATCGGGGAAGATTACAACTGGGATCAATTTGGATGGAAAGTTGTTAGACCATCCGAGGTTAAGCACTTAATTCCTGGATCTATTGCTAATATCAGAGCTAATGCAGGCAGTCCAGTTTATACTGGTGGCTGGGGGCATACAGTAGTTATCAAAGCGTTATCTGGGGACACTTTAACCGTTTATGAACAAAACTTTGCTGGTCATCAATATGTTGAAGAACGCACGTACTCCGCAAGCGCTTATTTAGGCGTTATCCAAACATTGGTTTACCCGCCTGAAATTGTGCAAGGCAAGCGTATAGATGGCACAGAGAGTGCGCCAGTACAGTCAGGCACGCCTGGGAATAATGAGCCTAAAACGATATCCGAAACGCAACAACAAGAAAAAACTGTAGGCATCCCAAACGATTTATATCGTGAGTGGAAAAACGAGGATGGTGTGGTAGAATTTTACATTAAAAATGGTTCAATATATGCCCCAATCTCAAAAGAACTTTATCCATCCGCCTTTTCTGGGGAAGAAGTTTCTGATAATTGGATTAAAAAGTCGGTTGAATATGAAACAATTGACATCGAACAAATTATTTCTTACTCGCTTCAAGACATTAGAAAAAATTGTTATCCATCTATTTCTTACGAGGTTAAGGGAACAGATGAAAATCTTGATATGGGTGATACAGTTAAAATTGATGATGAAGAATTCCCTGAGGGGTTAGTTTTATCTGCAAGGGTATCTGAGCAACATATATCATTTACTAATGACAGTACTAATCAGACTATTTTTGATAACTATAAAGCTTTAAAAAACAAACTAAGCAAAGACTTAATAGATCGATACGAAGAATTAGCAGAACAAGCTAAACCATATGAATTGAGACTTTTAACGGATAAAGGGACACAATTTAAAAACTCAACTGGTCTATCTGTGTTGACTGCAGAACTTTGGAAAAATAATAAGCAATATGATGCCACGTTCCAATTTAGAAATTTTGATACTTTACTTGCTAGTGGGCTAACTTATACAGTTGACGGTTCAACAATTCCAATTGACAAACCTTTTTTAATATCCGTTGATGCATTTATTGGTAATGACTTAGTTGCTACAAAGCAAATAACGTTTACTAATGTTACGGACGGTACAGACGGAATTGGTATTAAATCGTCATCCGTAATGCATGGCATATCCACATCAGCAACTGTACAGCCTACAAATTGGACAGAGGCAATGCCAGTTGCAAAACAAGGTGAATACTTATGGAAAAGGAAAATCACAGATTACACTGACCCAAGCAAACCAGATACCATTGAATTGACTTACAGTTACCAAGGTAAAAATGGAAGTGCTGGCACATCAGTCTCTGTAACTAAGATTGAGTATCAAGTAGGAACATCTGGAACTACAGCTCCTACAGGAACTTGGTCAACTGCTATTCCAAGCGTACCAGACGGGCAGTTTTTATGGTCTAAGACAACAATGTCAGATAACAGTGTTATCTATGGCATTAATAAACAAGGTGCAAAAGGCGATAAGGGAGACACTTACTACCCACACACGGCTTGGGCTAACAGCGAGGATGGCAAAGTAGACTTTAGCACGACCGAATCAAAAGGTAGACGGTATAAAGGCGACTACTCAGATACTAATGTAGCAGGTAGCCCAGACCCTACTAAATACAAGTGGGTTGATATGGTTGGAGGCGTTGAATCTGGCGGAACAAATGTATACTCAATAGCCGGTAACGCAACAATTGGTAAAAGTCACATTTCTGATTTAAACATGGATATTTCTACAGGCGTTATTCGTTTCGTTGCGTCTGGCCCAGACCCATTTATCGGAGTCGTCAGGTCACATCCTTTTGTTTACAATAATGTTTATGGTATTAAAATACCAGTTGTTGCAGGTAAAGACATTGCAGTAACTATCACTAATCCAAAGATAACTAAAAACTATGTTTCGTATTTTACAAATGATGGTAAAACTGTTAAGCAGTATAAAGGATATTTCGCTTCAAAATTTATTATCCCAAAACCTGAATTGGCTGGTGTTGATTTTATTACAATGCGAATTGGTGCAGGTAGTTCTAATGTTTCGATTGGTGATGTTTTTGAAACTAAAATTCAAGCAGAATATGGGAATATTTATTCAGATTGGTCGCCAGCCGATGAAGATGTTAGAGCAAATATTGATACCAAAGCTGACCAAGCCCTAACCCAAGACCAATTAAATCTCTTGCTTGAGACTCAAAACTTAATGACTGCAGAAATGAAGTCAAAGGCAACTGCTGAACAAGCTGATAGTTTGCTTGCGACTGTTAACAAAATTCTTTCTGATAGCGCTATAACTGGTGCTGATACAGAAGCAAAATTAATCGCAAATGCTGAACGTATTGAAGCTTTTAGAAAAGATTTTGACGATAAGATGGTTCAGCTTGATTTTGTTTCAAACTACATGCGCGTTACTGACTTAGGTTTTGAAATTTCAGCTAATGACGGTTCATCAAGTTTGTTAATTCAAAAAGACCGTATTTCAATGCTTTCAGCTGGTAAAGAAGTTATGTATATTTCGCAAGGATTAATTCATATTGACAATGGGGTATTTACCAAAACACTTCAAATTGGTAATTTCCGTGAGTCACAGGCTGATGGTGACCCAACAACAAACTTAGAAATTTATGTAGGTTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)