Phage RBP Database

Genbank accession

QBX18290.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,56

TF

Evidence RBPdetect2

Probability 0,64

Seq2Symm

C1 confidence 0,999 truncated

C1	0,999
C2	0,003
C3	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MDLIIHDAKLKKVAYIDNELQDTLSFYDDKWSRYLDTASSTFEFTVYKNGIKSDTVKQKAYQTLTERSFVSFKYNKRTYLFNVMKTEETETTIRCYCENLNLELLNEMAGPYKAKTEMSFVEYCNTFFLLVGGAITIGHNEIEDRERTLEWTGTDTKLKRLLSIANQFDAEIEFETILDEDSSLKSFILNIYKENDDKNQGVGKVRQDVVLRHGHNITGVKRTIDKTGIFNMITPVGKATVDVKVTKANPKYVAPKLNAVTYSGGSLSNGGRTISKSLVNEILNLCVQHKLLPSGVFSQMYLESFWGNSPVARADNNWGGLTWTGSTTRPSGIKVTQGTARPANEGGYYMHFASVSDYMKDYTYLLAEQGIYKVKGANNIDAYTKGLFRVGGAAYDYAAAGYGHYAPLMRSIRGGINSASNGAMDTLDNQFKTAGTVGTAPVSQIATKTKDALAQLGAIKGQRVGSGQCYALSALYSLKLGGAGLGGGVTGFRGVRPGGGAAASHIGEDYNWDQFGWKVVRPSEVKHLIPGSIANIRANAGSPVYTGGWGHTVVIKALSGDTLTVYEQNFAGHQYVEERTYSASAYLGVIQTLVYPPEIVQGKRIDGTESAPVQSGTPGNNEPKTISETQQQEKTVGIPNDLYREWKNEDGVVEFYIKNGSIYAPISKELYPSAFSGEEVSDNWIKKSVEYETIDIEQIISYSLQDIRKNCYPSISYEVKGTDENLDMGDTVKIDDEEFPEGLVLSARVSEQHISFTNDSTNQTIFDNYKALKNKLSKDLIDRYEELAEQAKPYELRLLTDKGTQFKNSTGLSVLTAELWKNNKQYDATFQFRNFDTLLASGLTYTVDGSTIPIDKPFLISVDAFIGNDLVATKQITFTNVTDGTDGIGIKSSSVMHGISTSATVQPTNWTEAMPVAKQGEYLWKRKITDYTDPSKPDTIELTYSYQGKNGSAGTSVSVTKIEYQVGTSGTTAPTGTWSTAIPSVPDGQFLWSKTTMSDNSVIYGINKQGAKGDKGDTYYPHTAWANSEDGKVDFSTTESKGRRYKGDYSDTNVAGSPDPTKYKWVDMVGGVESGGTNVYSIAGNATIGKSHISDLNMDISTGVIRFVASGPDPFIGVVRSHPFVYNNVYGIKIPVVAGKDIAVTITNPKITKNYVSYFTNDGKTVKQYKGYFASKFIIPKPELAGVDFITMRIGAGSSNVSIGDVFETKIQAEYGNIYSDWSPADEDVRANIDTKADQALTQDQLNLLLETQNLMTAEMKSKATAEQADSLLATVNKILSDSAITGADTEAKLIANAERIEAFRKDFDDKMVQLDFVSNYMRVTDLGFEISANDGSSSLLIQKDRISMLSAGKEVMYISQGLIHIDNGVFTKTLQIGNFRESQADGDPTTNLEIYVG

Physico‐chemical properties

protein length:	1398 AA
molecular weight:	153512,11630 Da
isoelectric point:	5,39819
aromaticity:	0,09800
hydropathy:	-0,38269

Domain architecture

QBX18290.1

1 1398 aa

RBD 275–410 · STR 411–595 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR002901
ENZ

IPR002901 G3DSA:3.90.1720.60

G3DSA:1.10.530.10
RBD

G3DSA:1.10.530.10 IPR007921

IPR002901
ENZ

IPR002901

QBX18290.1

11398 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0558
ATT

DC_0558 DC_0921

QBX18290.1

11398 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR002901	ENZ	DC_0048	266	403	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	275	410	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR002901	ENZ	DC_0048	285	393	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:3.90.1720.60	STR	G3DSA:3.90.1720.60	411	595	Merged direct domain	G3DSA:3.90.1720.60	Central	Low	Positional only	18 proteins / 18 hits
IPR007921	ENZ	DC_0404	444	594	InterPro cluster	CHAP domain	C-terminal	High	Text match	2 proteins / 2 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QBX18290.1

1 1398 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	271	271	0,9845
Central domain	272	476	206	0,6063
C-terminal	477	1398	921	0,0318

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Streptococcus phage Javan407 [NCBI] · taxon 2548153

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Streptococcus parauberis [NCBI] · taxon 1348

cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Genbank protein accession

QBX18290.1 [NCBI]

Genbank nucleotide accession

MK448753.1 [NCBI]

CDS location

range 29739 -> 33935
strand +

CDS

TTGGATTTAATTATTCATGACGCAAAATTAAAAAAAGTTGCATATATCGATAACGAATTACAAGACACCTTGTCTTTTTATGACGACAAGTGGTCACGTTATTTGGATACTGCATCATCAACATTTGAATTTACCGTTTATAAAAATGGTATTAAATCAGACACAGTAAAACAAAAGGCCTATCAGACACTAACTGAAAGGTCTTTTGTTTCGTTTAAATATAACAAGCGAACGTATTTGTTTAATGTGATGAAAACAGAAGAAACAGAAACAACAATTAGATGTTACTGTGAAAACCTCAATCTCGAGTTGCTAAACGAAATGGCTGGTCCATATAAAGCAAAAACTGAGATGTCATTTGTAGAGTATTGTAACACGTTCTTTTTATTAGTGGGTGGCGCTATAACTATTGGTCACAATGAAATTGAAGATCGTGAGCGTACTCTTGAGTGGACTGGAACAGATACTAAGTTAAAACGTTTGTTGTCTATTGCTAATCAATTTGATGCAGAAATTGAATTTGAAACTATTTTGGATGAAGATTCTAGCTTGAAATCATTCATTCTTAATATTTATAAAGAAAATGACGATAAAAATCAAGGCGTTGGTAAGGTTCGTCAAGATGTCGTTTTAAGACATGGTCATAATATTACAGGTGTAAAACGCACAATTGATAAAACTGGTATTTTTAACATGATTACACCAGTCGGAAAAGCTACAGTTGACGTTAAAGTCACAAAAGCGAATCCCAAATATGTAGCACCTAAATTAAATGCAGTCACTTATTCAGGCGGTTCACTTTCAAACGGTGGACGGACAATTTCCAAAAGTCTTGTAAATGAAATTTTAAACCTTTGTGTCCAACATAAGTTATTACCGTCTGGTGTATTTTCTCAAATGTACCTTGAATCATTCTGGGGTAATTCCCCAGTCGCTCGAGCTGATAATAACTGGGGTGGATTAACATGGACTGGCTCAACGACTAGACCATCTGGTATTAAAGTTACGCAAGGTACTGCACGTCCAGCTAACGAGGGCGGTTATTACATGCACTTCGCAAGTGTGTCGGACTACATGAAAGACTACACTTACTTATTAGCTGAGCAAGGTATTTACAAAGTAAAAGGTGCTAACAACATTGATGCTTATACAAAAGGTCTATTCCGTGTTGGTGGGGCGGCTTACGATTATGCAGCAGCTGGATATGGTCATTATGCACCATTAATGCGGTCAATTCGCGGTGGTATTAACAGTGCATCAAACGGTGCTATGGATACACTCGATAATCAATTTAAAACAGCTGGCACTGTTGGGACTGCACCAGTAAGTCAAATAGCAACCAAAACAAAAGATGCATTAGCTCAACTTGGAGCAATTAAAGGTCAACGTGTTGGATCTGGTCAATGTTACGCTTTATCAGCCTTGTACTCACTTAAATTAGGTGGGGCAGGCCTTGGCGGTGGAGTTACTGGGTTTAGGGGGGTGAGACCCGGTGGAGGTGCCGCCGCCTCACATATCGGGGAAGATTACAACTGGGATCAATTTGGATGGAAAGTTGTTAGACCATCCGAGGTTAAGCACTTAATTCCTGGATCTATTGCTAATATCAGAGCTAATGCAGGCAGTCCAGTTTATACTGGTGGCTGGGGGCATACAGTAGTTATCAAAGCGTTATCTGGGGACACTTTAACCGTTTATGAACAAAACTTTGCTGGTCATCAATATGTTGAAGAACGCACGTACTCCGCAAGCGCTTATTTAGGCGTTATCCAAACATTGGTTTACCCGCCTGAAATTGTGCAAGGCAAGCGTATAGATGGCACAGAGAGTGCGCCAGTACAGTCAGGCACGCCTGGGAATAATGAGCCTAAAACGATATCCGAAACGCAACAACAAGAAAAAACTGTAGGCATCCCAAACGATTTATATCGTGAGTGGAAAAACGAGGATGGTGTGGTAGAATTTTACATTAAAAATGGTTCAATATATGCCCCAATCTCAAAAGAACTTTATCCATCCGCCTTTTCTGGGGAAGAAGTTTCTGATAATTGGATTAAAAAGTCGGTTGAATATGAAACAATTGACATCGAACAAATTATTTCTTACTCGCTTCAAGACATTAGAAAAAATTGTTATCCATCTATTTCTTACGAGGTTAAGGGAACAGATGAAAATCTTGATATGGGTGATACAGTTAAAATTGATGATGAAGAATTCCCTGAGGGGTTAGTTTTATCTGCAAGGGTATCTGAGCAACATATATCATTTACTAATGACAGTACTAATCAGACTATTTTTGATAACTATAAAGCTTTAAAAAACAAACTAAGCAAAGACTTAATAGATCGATACGAAGAATTAGCAGAACAAGCTAAACCATATGAATTGAGACTTTTAACGGATAAAGGGACACAATTTAAAAACTCAACTGGTCTATCTGTGTTGACTGCAGAACTTTGGAAAAATAATAAGCAATATGATGCCACGTTCCAATTTAGAAATTTTGATACTTTACTTGCTAGTGGGCTAACTTATACAGTTGACGGTTCAACAATTCCAATTGACAAACCTTTTTTAATATCCGTTGATGCATTTATTGGTAATGACTTAGTTGCTACAAAGCAAATAACGTTTACTAATGTTACGGACGGTACAGACGGAATTGGTATTAAATCGTCATCCGTAATGCATGGCATATCCACATCAGCAACTGTACAGCCTACAAATTGGACAGAGGCAATGCCAGTTGCAAAACAAGGTGAATACTTATGGAAAAGGAAAATCACAGATTACACTGACCCAAGCAAACCAGATACCATTGAATTGACTTACAGTTACCAAGGTAAAAATGGAAGTGCTGGCACATCAGTCTCTGTAACTAAGATTGAGTATCAAGTAGGAACATCTGGAACTACAGCTCCTACAGGAACTTGGTCAACTGCTATTCCAAGCGTACCAGACGGGCAGTTTTTATGGTCTAAGACAACAATGTCAGATAACAGTGTTATCTATGGCATTAATAAACAAGGTGCAAAAGGCGATAAGGGAGACACTTACTACCCACACACGGCTTGGGCTAACAGCGAGGATGGCAAAGTAGACTTTAGCACGACCGAATCAAAAGGTAGACGGTATAAAGGCGACTACTCAGATACTAATGTAGCAGGTAGCCCAGACCCTACTAAATACAAGTGGGTTGATATGGTTGGAGGCGTTGAATCTGGCGGAACAAATGTATACTCAATAGCCGGTAACGCAACAATTGGTAAAAGTCACATTTCTGATTTAAACATGGATATTTCTACAGGCGTTATTCGTTTCGTTGCGTCTGGCCCAGACCCATTTATCGGAGTCGTCAGGTCACATCCTTTTGTTTACAATAATGTTTATGGTATTAAAATACCAGTTGTTGCAGGTAAAGACATTGCAGTAACTATCACTAATCCAAAGATAACTAAAAACTATGTTTCGTATTTTACAAATGATGGTAAAACTGTTAAGCAGTATAAAGGATATTTCGCTTCAAAATTTATTATCCCAAAACCTGAATTGGCTGGTGTTGATTTTATTACAATGCGAATTGGTGCAGGTAGTTCTAATGTTTCGATTGGTGATGTTTTTGAAACTAAAATTCAAGCAGAATATGGGAATATTTATTCAGATTGGTCGCCAGCCGATGAAGATGTTAGAGCAAATATTGATACCAAAGCTGACCAAGCCCTAACCCAAGACCAATTAAATCTCTTGCTTGAGACTCAAAACTTAATGACTGCAGAAATGAAGTCAAAGGCAACTGCTGAACAAGCTGATAGTTTGCTTGCGACTGTTAACAAAATTCTTTCTGATAGCGCTATAACTGGTGCTGATACAGAAGCAAAATTAATCGCAAATGCTGAACGTATTGAAGCTTTTAGAAAAGATTTTGACGATAAGATGGTTCAGCTTGATTTTGTTTCAAACTACATGCGCGTTACTGACTTAGGTTTTGAAATTTCAGCTAATGACGGTTCATCAAGTTTGTTAATTCAAAAAGACCGTATTTCAATGCTTTCAGCTGGTAAAGAAGTTATGTATATTTCGCAAGGATTAATTCATATTGACAATGGGGTATTTACCAAAACACTTCAAATTGGTAATTTCCGTGAGTCACAGGCTGATGGTGACCCAACAACAAACTTAGAAATTTATGTAGGTTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)