Protein

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Genbank accession
AHB80593.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MPVGFNSPARNLFLLGSSGAQVATNFFKSIDQSSSTDGTFVPSEIKFNYLDQKYILSGSASDSNSKYVGWIEKRDYDSTTDPENPTSTSEWDVRIQATQSSANTLLLAMELDSNNNLVVAGRTSSIPWVAKYSNAGVLDWQSTSNTGDLSYTGITSDSNGNYYACGSTDGGTPATLEAVAFVEKFDSNGNPGWGKQAFMLGRDVVLEKISANSRGEVVAVGFLEDDSAEKGYIVKIDTNTGEVLWDRTLERNISGYGGSSNDDIAAAEVRCTACYIDSKDQIYVVGTITGNSPVDNGTGEFLIKYSPEGNIIWQKENETIHYTALDGAPNVVPFDVKSDGETEQTVVLSVEDQGSFALNDSDIFITKYSKNGDLVFRRKISKGIDNLGAASLDADPSFYYILFRDQKFDVLAGEPDRYTFGKVSTSGNGLGAFQYDDLGPTATDIDYTVISNAENKIGRLSDGSVRNDTSDLVTYPFTANKLVFDDLATHVSNKRRQMDSADSFEYGGSPAIRINEFDQELNLLGNVYSGSGDWLDQSGKGRDTSASPGEPFYGSGGARFDGIDNYLEIANSTDFQFGTGDWTIEFWWKGFPSGSFTAVITTLISSNEAGTWRIGTRYNSTNRIYFARGTGSDFTDRQIDVNVNDNRWHHIAFVRSNGVIIPFVDGVDRTSDLVNGNLLDSNSMTTSNPVKIGYNQRDNAYIEGSVSQLRVVKGIAVYTSNFTPPTEALTAIPGTSLLTCQGLSITDASSSNHTITDPNAGSSAMVQSDLPIGRPTYNAAGYWDFDGFSEYLDASPPILKNYAGGTIEAWFKTGDSTTNGSTIYSEHTSGITGAGWAHLRIRGGKLRYTINPASGLTVKIQCAKFVDDNNWHHVVFTGSGSGSNGYKFYIDGMRYNESIIGDDNGYKWFNNNPATNEYSIGKTGQSTDGNNYFMGSLGDVRIYSRALTQAQAHQNYNATKSKYINEAPSTAPRITDKSIVIDSLRLYYDFGNRATYDTAQNLIPNSEDFTKWNQAVHFWENNYAIAPDGTKTAALLKESIPSQQQLSYHNIGLGGTSLVVGETYTFSVYAKANTRDTFEMHMYGDSSASFNLTTGSSTSTSSMTDVGDGWWLCKWVREKTNTAGFDYVYLGFSGSTYAGAGVDESIFIWHPQFERDVTRGRYIKTSGISITAPTTVKNLSSSSSGVGASLYTGTINGGATFNSDGYFEFDGTDDYIQSSSLVAPSEADFSVIMWYKITSTSGRGGLMERAADAPFTGWFLGHSGTTRWAAQVRDADNDEVDFEFTFPTVDQWTCDAFTWNTSTQSLAPYRNGAAAAGTATQSGNAVGSLDGNTRYPMAIGARLNDSGAQYKPMECGEVQIYIKALTAAEVLQNFNATRSKYGV
Physico‐chemical
properties
protein length:1383 AA
molecular weight: 150365,81220 Da
isoelectric point:4,65815
aromaticity:0,11569
hydropathy:-0,41265

Domains

Domains [InterPro]
DC_0902
ATT
1–529
DC_0902 G3DSA:2.60.120.200 IPR013320 G3DSA:2.60.120.200
IPR011047
STR
217–414
IPR011047 IPR013320 PF13385 IPR013320
PF13385
LEC
561–712
PF13385 G3DSA:2.60.120.200 PF13385
DC_2085
STR
672–957
DC_2085
DC_0353
STR
909–1382
DC_0353
AHB80593.1
1 1383
Architecture
ATT
STR
ATT 1-529 | STR 530-1382 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHB80593.1
1 1383
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,9503
Central domain 31 558 529 0,7258
C-terminal 559 1383 824 0,5016
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-558
C-terminal
559-1383

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014h
[NCBI] 		1340810 Uroviricota > Caudoviricetes > Pantevenvirales > Sedonavirus > Sedonavirus tusconh
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHB80593.1 [NCBI]
Genbank nucleotide accession
KF156338 [NCBI]
CDS location
range 165256 -> 169407
strand +
CDS
ATGCCAGTAGGTTTTAATAGTCCCGCCAGAAACCTTTTTCTTTTAGGTTCTTCTGGCGCACAAGTAGCAACGAACTTTTTTAAGTCTATCGATCAGTCTTCATCAACTGATGGTACTTTTGTTCCAAGTGAAATTAAATTTAATTACCTAGATCAAAAGTACATTCTGTCTGGTTCAGCATCAGATAGTAACTCAAAATATGTTGGGTGGATTGAAAAAAGAGATTACGATTCCACTACTGATCCAGAAAATCCAACATCAACGTCTGAATGGGATGTAAGAATTCAAGCGACACAATCATCTGCTAATACATTACTGCTTGCTATGGAGTTGGATAGTAACAACAATTTAGTTGTTGCTGGTAGAACAAGTAGTATTCCTTGGGTTGCGAAGTATTCTAATGCTGGTGTACTAGACTGGCAATCAACATCTAACACTGGTGACTTATCATATACTGGCATTACATCAGATAGCAATGGAAACTATTATGCTTGTGGTAGCACAGATGGTGGAACCCCAGCAACCCTGGAGGCAGTAGCATTTGTAGAAAAGTTTGATAGTAATGGCAACCCTGGATGGGGCAAACAAGCATTTATGTTAGGCAGAGATGTTGTTTTGGAAAAAATCTCTGCTAACTCTAGAGGTGAGGTAGTCGCTGTTGGATTCCTAGAAGATGACAGTGCTGAGAAAGGATACATCGTTAAGATTGATACCAACACAGGTGAAGTTCTATGGGACAGAACACTAGAGAGGAATATATCTGGATATGGTGGATCAAGTAATGATGATATTGCAGCTGCCGAGGTAAGATGTACTGCTTGTTATATTGACAGCAAGGATCAAATTTATGTTGTTGGTACTATTACTGGTAATAGTCCTGTTGACAATGGTACAGGAGAGTTCCTTATCAAGTATAGTCCCGAAGGAAATATTATATGGCAGAAAGAAAACGAGACTATACATTACACTGCGCTTGATGGTGCCCCTAATGTAGTTCCATTTGATGTTAAATCTGATGGTGAAACAGAGCAAACAGTTGTGCTATCGGTAGAAGACCAAGGATCTTTTGCTCTTAATGATTCTGATATTTTTATAACTAAGTATTCTAAAAATGGAGACTTAGTTTTTAGAAGAAAAATTAGTAAAGGTATTGATAATTTAGGTGCTGCTTCTCTAGATGCTGACCCGTCATTCTATTATATTTTGTTTAGAGATCAGAAATTTGATGTGCTGGCAGGAGAACCAGACAGATATACTTTTGGTAAGGTCAGTACGTCTGGTAATGGTTTGGGTGCTTTCCAATATGATGATTTAGGACCAACCGCAACAGATATTGACTATACTGTTATCTCTAATGCAGAAAATAAAATTGGCAGACTATCTGATGGTTCTGTAAGGAATGATACAAGTGATCTAGTTACATATCCTTTCACTGCTAACAAACTAGTCTTTGATGATCTTGCTACTCATGTCTCTAACAAGAGGAGACAGATGGATAGTGCTGATAGTTTTGAGTATGGTGGTAGTCCTGCTATTAGAATTAATGAGTTTGACCAAGAGTTAAACCTACTCGGCAATGTCTATTCTGGTAGTGGAGACTGGTTAGATCAATCAGGTAAAGGTAGGGATACTAGTGCTTCTCCTGGAGAACCTTTTTATGGTTCTGGTGGAGCAAGATTTGATGGTATTGATAATTATTTAGAAATTGCAAACAGCACAGACTTTCAATTTGGAACTGGTGATTGGACTATTGAATTTTGGTGGAAAGGGTTTCCTTCAGGATCTTTTACTGCTGTCATTACAACACTGATCTCCAGTAATGAAGCAGGAACTTGGAGAATTGGAACAAGATACAACAGCACCAACAGAATTTATTTTGCTCGTGGAACTGGTAGTGATTTTACAGATAGACAAATAGATGTCAATGTTAATGATAATCGATGGCATCATATTGCTTTTGTTAGAAGTAATGGAGTCATCATTCCTTTTGTTGATGGTGTTGATCGAACATCAGACTTAGTAAATGGGAATCTCCTTGATTCTAATAGTATGACTACAAGCAATCCTGTCAAGATTGGATATAACCAGAGAGATAATGCTTATATTGAGGGTAGTGTTTCTCAATTGAGAGTAGTTAAAGGAATAGCAGTATATACAAGCAACTTTACACCACCAACCGAGGCTTTAACTGCTATTCCAGGTACATCTTTACTAACATGTCAAGGACTTTCTATAACTGATGCTAGTAGTAGCAATCATACAATTACAGATCCTAATGCAGGAAGTTCGGCCATGGTGCAGAGCGATTTACCCATTGGTAGACCTACCTACAACGCCGCTGGATACTGGGACTTTGATGGATTTTCTGAGTACCTTGATGCATCACCTCCAATTCTTAAGAACTATGCTGGTGGAACAATTGAAGCATGGTTTAAGACAGGAGATAGTACAACCAATGGATCTACAATTTATTCGGAACATACAAGTGGAATTACTGGAGCTGGTTGGGCACATCTCAGAATTCGCGGCGGTAAACTAAGGTATACTATTAATCCTGCGAGCGGATTGACAGTAAAAATTCAATGTGCCAAGTTTGTGGATGATAACAATTGGCATCATGTTGTGTTCACTGGTAGTGGGTCTGGATCAAATGGTTATAAGTTTTATATTGATGGTATGAGATACAATGAATCTATAATAGGTGATGATAATGGATACAAATGGTTTAATAACAACCCTGCAACGAACGAATATTCTATTGGAAAAACTGGACAAAGTACAGATGGTAACAATTATTTTATGGGTTCACTCGGTGATGTTCGTATCTATTCAAGAGCTCTAACACAAGCACAAGCCCACCAGAACTATAACGCTACCAAGTCTAAGTATATCAACGAAGCACCTTCCACAGCACCTAGGATTACTGATAAGTCTATTGTAATTGATAGCCTGAGACTATACTATGACTTTGGAAACAGAGCAACGTATGATACAGCACAAAACCTTATTCCTAATAGTGAAGACTTTACTAAGTGGAATCAAGCAGTTCACTTCTGGGAAAATAACTATGCTATTGCTCCTGATGGAACTAAGACAGCAGCATTATTAAAAGAATCTATCCCATCACAGCAGCAGTTGTCTTACCACAATATTGGTCTCGGTGGAACATCTTTAGTTGTTGGAGAAACATATACTTTTAGTGTATATGCCAAAGCAAATACCAGAGATACCTTCGAGATGCATATGTATGGTGATAGCAGTGCTAGTTTCAATTTGACTACTGGATCTTCAACGTCCACTTCTTCCATGACAGATGTTGGAGATGGTTGGTGGTTATGTAAGTGGGTTAGAGAAAAGACTAATACTGCAGGTTTTGATTATGTTTATCTTGGATTTTCTGGTAGCACATACGCTGGTGCTGGAGTAGATGAATCGATATTCATTTGGCATCCTCAATTTGAAAGAGATGTTACCCGTGGCAGATACATCAAAACATCTGGAATTTCTATCACAGCACCAACCACAGTCAAGAACCTCTCAAGTTCTTCTTCTGGAGTTGGAGCGTCGCTTTATACTGGCACAATCAACGGAGGAGCTACATTTAATAGTGATGGATACTTTGAGTTTGATGGAACAGATGATTACATCCAATCAAGTAGTCTAGTGGCACCTTCAGAAGCAGACTTTAGTGTTATCATGTGGTATAAGATTACTAGCACTTCTGGTAGAGGTGGTCTCATGGAAAGAGCAGCTGATGCTCCTTTCACTGGATGGTTTTTAGGTCATAGTGGAACCACCAGATGGGCTGCTCAGGTTAGAGATGCCGATAATGATGAGGTTGATTTCGAGTTTACTTTCCCAACAGTTGATCAATGGACTTGTGATGCGTTCACTTGGAATACCTCAACACAATCACTAGCACCATATAGAAATGGTGCTGCTGCTGCTGGAACAGCAACGCAATCTGGAAATGCTGTTGGATCTTTAGATGGCAATACAAGGTATCCTATGGCAATTGGTGCTAGACTTAATGACAGTGGAGCACAATACAAACCTATGGAGTGTGGTGAGGTTCAGATATATATTAAAGCTCTAACAGCAGCAGAAGTTCTCCAAAACTTCAATGCCACCCGTAGTAAGTATGGTGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
43e56c561907712f3fa6ffede814b3172b5a5eb0f852a294f69901f0681ca881
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50