Phage RBP Database

Genbank accession

ARQ95367.1 [GenBank]

Protein name

hypothetical protein

RBP type

TF

Evidence RBPdetect

Probability 0,86

Protein sequence

MKKQTPFGLMKSGDVRVFSLLGLYTKKPERILDIMDRAVDNNPYQRPAMQAPPTVAVSATSDPTLVFTTMAAAGALTTAAIKQVAWYGGVPTPILTQYVCMPVASVLPSTAGNIGSGFADKNQWASAMEIMTDSDKVQFGIYMSNAVKVMFQVDGQYVDFAGVTGLGAASADTFLGLTFATRKVRRIRVLIPCLPSKGPCLVKSIRVSPTCSFWKPNQANVLRMAWYGDSYGEGTNGAASIYPIPNAAWPVLTGELLGIRDVRQLSVGSTGYLSDAAGARSKLRDQMPRTFSQGPFDIAVFAHGYNDSGFAPAAIQAEVLFCLQMFRQNFPLTPMVVLGCQAGAAGPNAAQIACDGAIGAAVLQFNDPLCKFVPVSTDTPTWLNGTGAVGATNGSGNSDFYVDPDKAHPNVAGAEYLSFRSAIGIRTAVASMAA

Physico‐chemical properties

protein length:	434 AA
molecular weight:	45890,17200 Da
isoelectric point:	8,69448
aromaticity:	0,09217
hydropathy:	0,12327

Domain architecture

ARQ95367.1

1 434 aa

STR 222–427 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF52266
STR

SSF52266

IPR036514
STR

IPR036514

ARQ95367.1

1434 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1375
STR

DC_1375

ARQ95367.1

1434 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF52266	STR	SSF52266	222	417	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR036514	STR	IPR036514	223	427	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits

Proteins with similar domain architecture

Phage

Bradyrhizobium phage BDU-MI-1 [NCBI] · taxon 1983459

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Bradyrhizobium diazoefficiens [NCBI] · taxon 1355477

cellular organisms Bacteria Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales

Genbank protein accession

ARQ95367.1 [NCBI]

Genbank nucleotide accession

KY940711 [NCBI]

CDS location

range 91451 -> 92755
strand -

CDS

ATGAAGAAGCAAACTCCTTTCGGCCTCATGAAGAGCGGAGACGTTCGCGTCTTCTCTTTGCTGGGCCTCTACACGAAGAAGCCTGAGCGCATCCTCGACATCATGGATCGCGCTGTCGACAACAATCCTTACCAGCGACCGGCGATGCAGGCTCCGCCTACCGTCGCCGTATCGGCCACGTCGGATCCGACCCTCGTCTTTACGACGATGGCTGCCGCGGGCGCTCTCACGACCGCTGCCATCAAGCAGGTCGCATGGTACGGCGGTGTGCCTACCCCGATCCTGACGCAGTATGTCTGTATGCCGGTGGCGAGCGTCCTGCCGTCGACGGCCGGCAACATCGGCAGCGGGTTCGCCGACAAGAACCAGTGGGCCTCGGCCATGGAGATCATGACCGACTCTGACAAGGTTCAGTTCGGCATCTACATGAGCAATGCCGTCAAGGTGATGTTCCAGGTCGATGGACAGTACGTCGACTTCGCGGGCGTGACCGGGCTTGGCGCTGCCAGCGCTGACACCTTCCTCGGCCTGACGTTTGCGACGCGCAAGGTGCGCCGCATCCGTGTGCTAATTCCGTGTCTGCCGTCGAAGGGTCCGTGTCTCGTCAAGTCGATCCGCGTTTCCCCGACCTGCAGCTTCTGGAAACCGAACCAGGCAAACGTGCTTCGCATGGCCTGGTACGGCGACAGCTACGGCGAGGGCACCAACGGCGCCGCGTCCATCTATCCGATCCCGAATGCTGCCTGGCCCGTCCTGACCGGCGAGCTTCTCGGCATCCGCGACGTTCGCCAGCTGTCGGTTGGATCGACCGGATACCTCTCGGACGCTGCCGGTGCGCGTTCGAAGCTGCGGGACCAGATGCCGCGAACCTTCAGTCAGGGTCCGTTCGACATCGCCGTGTTCGCGCACGGCTACAACGACTCCGGCTTCGCTCCGGCGGCCATCCAGGCGGAAGTTCTCTTCTGCTTGCAGATGTTCCGGCAGAACTTCCCGCTGACCCCCATGGTCGTGCTGGGCTGTCAGGCTGGCGCCGCCGGCCCGAACGCTGCGCAGATCGCCTGTGATGGAGCTATCGGGGCTGCGGTTCTCCAGTTCAACGATCCGCTCTGCAAGTTTGTCCCGGTCTCGACCGACACGCCGACTTGGCTGAACGGTACGGGCGCTGTGGGTGCCACGAACGGATCGGGCAATTCGGACTTCTATGTCGATCCCGACAAGGCTCACCCCAACGTGGCCGGGGCGGAGTATCTGTCGTTCCGATCTGCCATTGGCATCCGGACCGCAGTCGCAAGCATGGCGGCCTAA

Title	Authors	Date	PMID	Source
Complete genome sequence of a novel bacteriophage infecting Bradyrhizobium diazoefficiens USDA110T	Liu,J., Yu,H., Huang,Y., Yu,Z., Fan,G., Jin,J., Liu,X. and Wang,G.	2017-07-27	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature