Protein

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Genbank accession
ARQ95367.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MKKQTPFGLMKSGDVRVFSLLGLYTKKPERILDIMDRAVDNNPYQRPAMQAPPTVAVSATSDPTLVFTTMAAAGALTTAAIKQVAWYGGVPTPILTQYVCMPVASVLPSTAGNIGSGFADKNQWASAMEIMTDSDKVQFGIYMSNAVKVMFQVDGQYVDFAGVTGLGAASADTFLGLTFATRKVRRIRVLIPCLPSKGPCLVKSIRVSPTCSFWKPNQANVLRMAWYGDSYGEGTNGAASIYPIPNAAWPVLTGELLGIRDVRQLSVGSTGYLSDAAGARSKLRDQMPRTFSQGPFDIAVFAHGYNDSGFAPAAIQAEVLFCLQMFRQNFPLTPMVVLGCQAGAAGPNAAQIACDGAIGAAVLQFNDPLCKFVPVSTDTPTWLNGTGAVGATNGSGNSDFYVDPDKAHPNVAGAEYLSFRSAIGIRTAVASMAA
Physico‐chemical
properties
protein length:434 AA
molecular weight: 45890,17200 Da
isoelectric point:8,69448
aromaticity:0,09217
hydropathy:0,12327

Domains

Domains [InterPro]
DC_1375
STR
24–431
DC_1375
SSF52266
STR
222–417
SSF52266
IPR036514
STR
223–427
IPR036514
ARQ95367.1
1 434
Architecture
STR
STR 24-431 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage BDU-MI-1
[NCBI] 		1983459 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bradyrhizobium diazoefficiens
[NCBI] 		1355477 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ95367.1 [NCBI]
Genbank nucleotide accession
KY940711 [NCBI]
CDS location
range 91451 -> 92755
strand -
CDS
ATGAAGAAGCAAACTCCTTTCGGCCTCATGAAGAGCGGAGACGTTCGCGTCTTCTCTTTGCTGGGCCTCTACACGAAGAAGCCTGAGCGCATCCTCGACATCATGGATCGCGCTGTCGACAACAATCCTTACCAGCGACCGGCGATGCAGGCTCCGCCTACCGTCGCCGTATCGGCCACGTCGGATCCGACCCTCGTCTTTACGACGATGGCTGCCGCGGGCGCTCTCACGACCGCTGCCATCAAGCAGGTCGCATGGTACGGCGGTGTGCCTACCCCGATCCTGACGCAGTATGTCTGTATGCCGGTGGCGAGCGTCCTGCCGTCGACGGCCGGCAACATCGGCAGCGGGTTCGCCGACAAGAACCAGTGGGCCTCGGCCATGGAGATCATGACCGACTCTGACAAGGTTCAGTTCGGCATCTACATGAGCAATGCCGTCAAGGTGATGTTCCAGGTCGATGGACAGTACGTCGACTTCGCGGGCGTGACCGGGCTTGGCGCTGCCAGCGCTGACACCTTCCTCGGCCTGACGTTTGCGACGCGCAAGGTGCGCCGCATCCGTGTGCTAATTCCGTGTCTGCCGTCGAAGGGTCCGTGTCTCGTCAAGTCGATCCGCGTTTCCCCGACCTGCAGCTTCTGGAAACCGAACCAGGCAAACGTGCTTCGCATGGCCTGGTACGGCGACAGCTACGGCGAGGGCACCAACGGCGCCGCGTCCATCTATCCGATCCCGAATGCTGCCTGGCCCGTCCTGACCGGCGAGCTTCTCGGCATCCGCGACGTTCGCCAGCTGTCGGTTGGATCGACCGGATACCTCTCGGACGCTGCCGGTGCGCGTTCGAAGCTGCGGGACCAGATGCCGCGAACCTTCAGTCAGGGTCCGTTCGACATCGCCGTGTTCGCGCACGGCTACAACGACTCCGGCTTCGCTCCGGCGGCCATCCAGGCGGAAGTTCTCTTCTGCTTGCAGATGTTCCGGCAGAACTTCCCGCTGACCCCCATGGTCGTGCTGGGCTGTCAGGCTGGCGCCGCCGGCCCGAACGCTGCGCAGATCGCCTGTGATGGAGCTATCGGGGCTGCGGTTCTCCAGTTCAACGATCCGCTCTGCAAGTTTGTCCCGGTCTCGACCGACACGCCGACTTGGCTGAACGGTACGGGCGCTGTGGGTGCCACGAACGGATCGGGCAATTCGGACTTCTATGTCGATCCCGACAAGGCTCACCCCAACGTGGCCGGGGCGGAGTATCTGTCGTTCCGATCTGCCATTGGCATCCGGACCGCAGTCGCAAGCATGGCGGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3a506b6e793f473ea0718fb05a5d6fc7cdf42a69b4129d6798699597952dd30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7537
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bradyrhizobium diazoefficiens USDA110T Liu,J., Yu,H., Huang,Y., Yu,Z., Fan,G., Jin,J., Liu,X. and Wang,G. 2017-07-27 — GenBank