Protein

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Genbank accession
GENB_10c3c5e38913 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSVLFSNNALTVLAAAVGQNEVTSTITVATGAGQRFAAPTNGDYQVITLSDPLYTRFEICHLTARTGDTLTVLRGQEGTTKQAWDVGDRIYASFTASTVGLFLRADTPASISGLWDFSTPPLINGNNIWHSGNVTPADRTKAQTISGLWTFTTLPKFNAFNFVTTQGATMVGPFLLYGSPTQDNEAATKLYVDNLAAGLHDKEAVVAASTDAGGNVNITSAPSTLDGVTLVAGNRILLKNQTNKTQNLIYVFNAVGQPLTAASDSDETGDLKAGSTVFVTGGTVNKNSRWTVITTDPITIGTTPIEWTQTSGAGQIRSGPGIKIIGDQISADVPSAGGLTVSVADGIGLSVMQDLVVNTGAATAGTTGASLRYNSITVDKFGRVVNATNLPYALTTGAVFTGALTRTSTPSSGNDITTVDFVQNAIVSISTMRQPVAAVATSNVSLSGLGFIDGYQVKLGERVLVAGQTTQTANGVYVTTANAWVRASDFNSTSSLAAGVMFPVQNGTTFKNQIFMLSTQGTISIGTTPITFQRVTGTGLINKASGGGIDIVNDSIGLETQSGLTAGTYNTARVTVNSKGIITGIEAGSSGVTSFNGRSGVVMPATNDYTFAMLGGKPTTLAGYGITDPVMLRTGGTITGVVSIDYGNPAATDGPYPLLFMRLTEGERNTNKVGMNIIKEDRNSWAIAAVAGSDVVNITNGSKLNLRFQTAMVNDAEILTDANFDAWTAVAFSTGNTTRNAVARGCYMVDTTSLAGTLVLPSNPAPGTAVRVLDAGGTFGTKNLTISRNNARIVGALEDLVLDKNNGGVTLVYYNAARGWVPFFS
Physico‐chemical
properties
protein length:825 AA
molecular weight: 85679,11330 Da
isoelectric point:5,48123
aromaticity:0,07152
hydropathy:0,07176

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_10c3c5e38913
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 625 625 0,9845
Central domain 626 814 190 0,0812
C-terminal 815 825 10 0,9932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-625
Central
626-814
C-terminal
815-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Ep026
[NCBI] 		3038330 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OQ603353.1_CDS_[182994..185471] [NCBI]
Genbank nucleotide accession
OQ603353.1 [NCBI]
CDS location
range 182994 -> 185471
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
59ba66dba3b8093544cd7cd05b5c396d4240f010fec1b9dfe3f873fd6cb43230

                    

                    
                      ColabFold
                    
                  

                  

                  

                    

                      Source
                      ColabFold
                    

                    

                      Method
                      ColabFold
                    

                    

                      Resolution
                      0,7165
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50