Phage RBP Database

Genbank accession

UJD18031.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,96

Seq2Symm

C1 confidence 0,919

C1	0,919
C3	0,503
C2	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTETTPEVVPIRVRHKRMPASEWARSDFVLYDGELGVESDTGKVKVGNGSDYFSALQYLTGPKGDRGETGPVGPKGADGVMRFENLTSQQREGLRGDNGHSLNANVRIEGSYRNGATSQLNLIADVYYDGTRLTSGYTVDYYYRGFGNNNWQSLLNQTPDANGKFGQWNASQRSGGWLEVYIVVTHNGIKAAASTRLDNVSDGARGANGATGPAGPAGPAGARGADGAPGQNIINQNSGQPMKYWSGTRAQYDAIPNKDSNTIYDIYSSS

Physico‐chemical properties

protein length:	270 AA
molecular weight:	28973,27880 Da
isoelectric point:	6,31523
aromaticity:	0,09259
hydropathy:	-0,70926

Domain architecture

UJD18031.1

1 270 aa

ATT 11–51 · STR 52–133 · STR 203–251 · RBD 252–267 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF69349
STR

SSF69349 G3DSA:1.20.5.320

IPR041352
ATT

IPR041352 IPR056923

UJD18031.1

1270 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2298
STR

DC_2298

UJD18031.1

1270 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF69349	STR	SSF69349	11	133	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR041352	ATT	DC_0533	13	51	InterPro cluster	Major tropism determinant, N-terminal domain	Central	Medium	Text match	295 proteins / 296 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	203	251	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
IPR056923	RBD	DC_0181	242	267	InterPro cluster	Minor tail protein gp31, C-terminal	C-terminal	High	Text match	208 proteins / 208 hits

Proteins with similar domain architecture

Phage

Streptococcus phage MissE1 [NCBI] · taxon 2911158

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Streptococcus mitis [NCBI] · taxon 28037

cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Genbank protein accession

UJD18031.1 [NCBI]

Genbank nucleotide accession

OL774874.1 [NCBI]

CDS location

range 6231 -> 7043
strand -

CDS

ATGACGGAAACAACGCCTGAAGTAGTACCTATCAGGGTACGACATAAACGGATGCCAGCTAGTGAGTGGGCAAGAAGTGACTTTGTGTTGTATGACGGAGAGCTAGGGGTAGAAAGCGACACTGGTAAGGTCAAGGTCGGAAATGGTAGTGACTATTTCTCAGCTCTTCAATATCTGACTGGTCCTAAAGGTGACCGTGGAGAAACAGGACCAGTAGGGCCAAAAGGAGCGGACGGTGTTATGCGATTCGAGAACCTGACAAGTCAGCAGAGAGAGGGCTTGCGAGGAGATAACGGTCATAGCTTAAATGCCAATGTTCGTATTGAGGGAAGCTATCGAAACGGTGCGACTAGTCAGTTGAATTTGATCGCAGACGTCTACTATGACGGAACACGGTTAACTAGTGGCTATACTGTTGATTACTACTATCGAGGTTTTGGAAATAACAACTGGCAAAGCTTGCTAAACCAAACGCCTGATGCAAATGGAAAGTTTGGCCAGTGGAATGCTTCTCAGCGTTCAGGAGGCTGGCTTGAGGTCTACATCGTTGTAACGCACAACGGCATTAAAGCAGCTGCTAGCACACGACTTGATAATGTCAGCGACGGTGCAAGGGGGGCGAATGGTGCAACGGGTCCAGCAGGACCGGCAGGACCGGCAGGAGCTAGAGGAGCGGATGGAGCGCCAGGGCAAAACATCATCAATCAAAACAGTGGGCAACCGATGAAGTATTGGTCTGGTACAAGGGCTCAATATGACGCGATTCCTAACAAGGATAGCAATACTATCTATGACATCTATAGTAGTTCGTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)