Phage RBP Database

Genbank accession

LC727898.1_CDS_[51440..52753] [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

Protein sequence

MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEVARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGEASESARQAAESAASAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGTQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPGTDGALITGLTFLDPKDATQVQGMFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Physico‐chemical properties

protein length:	437 AA
molecular weight:	44167,25190 Da
isoelectric point:	4,68435
aromaticity:	0,03204
hydropathy:	-0,68307

Domain architecture

LC727898.1_CDS_[51440..52753]

1 437 aa

ATT 1–145 · RBD 363–426 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR013609
ATT

IPR013609 IPR009640

LC727898.1_CDS_[51440..52753]

1437 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0488
STR

DC_0488

LC727898.1_CDS_[51440..52753]

1437 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013609	ATT	DC_0732	1	145	InterPro cluster	Lambda-like tail fibre protein, N-terminal	N-terminal	Medium	Text match	183 proteins / 183 hits
IPR009640	RBD	DC_0593	363	426	InterPro cluster	Bacteriophage 933W, L0121, tail fibre, C-terminal	C-terminal	Low	Positional only	120 proteins / 125 hits

Proteins with similar domain architecture

Phage

Stx1a-converting phage Stx1_JNE102772 [NCBI] · taxon 2977492

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

LC727898.1_CDS_[51440..52753] [NCBI]

Genbank nucleotide accession

LC727898.1 [NCBI]

CDS location

range 51440 -> 52753
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)