Phage RBP Database

Genbank accession

XPP60043.1 [GenBank]

Protein name

adhesin

RBP type

TF

Evidence RBPdetect

Probability 0,87

TF

Evidence RBPdetect2

Probability 0,81

Seq2Symm

C3 confidence 0,977

C3	0,977
C1	0,660
C2	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKKIMLAVALMVSVMTVNMANAAVSLKSSGDQWGPAVQDLMNAKENGNWNDARFISTFNNRFNGTAEEAKALLDSLKTGNVPSSLDDFNNSISTGGGNTSPTKGDKGDKGDKGDKGDPGKDGADGKDADTSNLVNKDTQAARDSAQDTAIDSKADKTALNDVSVKTDHAFDIAVEGRATANNALSTVYGLIPQVLDNGKKITDVDNKVDANKAETDASLNTKVDKDTQATRDSGQDEHINAVQDAAQTANNRATDLEHRADSTEGAIRETNKQLEVTDSRSINNAERLDGVEAKNAEQDTAIAGKADQSALDKEVTDRQNADTALKNNIDQNKAGQAVTDSKQDKAINGKVDKSTYAVDKAVQGIHDALQDGAIIGLEVSKADKSDLNKETADRVKGDKALDDKINKAVSDQASTDNAQNAAIGKEVTDRQKADTALKNNIDQNKAAQAKTDAKQDKALSDEAKTRSDADKQLQANIDKNKSDQAKTDAKQNAAIDSKVDKSTYAVDKAKQAVHDAVQDAAIVGLAVTKADKADLNKEVAARKDADKVLQSNIDSEAQTRATADTALKNNIDQNKADQAVTDATQDKALSAETDNRIAGDTALKANIAKNKADQAVTDSDQDKVIATKASKKELASETVARQNADKNLQANIDTESSTRANADNALKANIDKNKSDQAVTDSNQDKVIATKASKKELASETASRKSADAKLSSRIDSNDATLVQHDERITSNTNRIGSVEKRVSNFENQTNRRFSDIDKRIGDNRKVASAGIAGAGAMANIPQVTQNGNVSVGAGIGGYDGEQAVAVGFSARVSESVTTKVSVSTNTQSEVLWGAGVGVEW

Physico‐chemical properties

protein length:	841 AA
molecular weight:	88930,84890 Da
isoelectric point:	5,06415
aromaticity:	0,01902
hydropathy:	-0,80975

Domain architecture

XPP60043.1

1 841 aa

RBD 742–781 · ATT 782–841

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil G3DSA:3.30.1300.30

IPR045584
RBD

IPR045584

IPR005594
ATT

IPR005594

XPP60043.1

1841 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1037
STR

DC_1037 DC_1303

XPP60043.1

1841 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	239	273	Coils	Coil	-	-	-	-
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	742	841	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
IPR045584	RBD	IPR045584	748	841	Merged direct domain	Pilin-like	C-terminal	Low	Positional only	5 proteins / 5 hits
IPR005594	ATT	DC_0200	782	841	InterPro cluster	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	C-terminal	Medium	Text match	43 proteins / 43 hits

Proteins with similar domain architecture

Phage

Erwinia phage Kaldavass [NCBI] · taxon 3374950

Viruses

Host No host information

Genbank protein accession

XPP60043.1 [NCBI]

Genbank nucleotide accession

PQ464595 [NCBI]

CDS location

range 80007 -> 82532
strand -

CDS

ATGAAAAAGATTATGCTGGCAGTAGCCTTAATGGTTTCTGTGATGACGGTTAATATGGCTAACGCCGCCGTATCGTTGAAATCATCTGGCGATCAATGGGGTCCGGCTGTTCAGGACTTGATGAACGCCAAAGAAAACGGAAATTGGAACGACGCACGTTTCATTTCCACGTTCAACAACCGTTTCAATGGTACAGCAGAAGAAGCAAAAGCTTTGCTAGATTCGTTAAAAACTGGTAATGTTCCTTCGTCCTTGGACGACTTTAATAACTCTATCAGTACTGGTGGTGGCAATACTTCACCAACCAAAGGTGATAAGGGTGATAAAGGTGACAAAGGCGATAAAGGTGATCCGGGTAAAGATGGGGCAGATGGTAAAGATGCCGATACCTCTAACCTGGTCAACAAAGATACTCAGGCCGCACGTGACTCTGCCCAGGATACAGCTATTGACTCTAAAGCTGATAAAACTGCGTTAAATGATGTTTCAGTGAAAACTGATCATGCGTTTGATATTGCGGTTGAAGGTCGTGCGACTGCCAACAATGCGTTAAGTACTGTTTATGGGTTAATCCCACAAGTACTTGATAATGGCAAGAAGATCACTGATGTTGACAATAAAGTTGATGCTAATAAAGCTGAAACTGATGCCAGCCTGAATACCAAAGTTGACAAAGATACCCAGGCCACTCGTGATTCAGGTCAAGATGAACATATCAATGCGGTACAAGACGCAGCCCAAACTGCCAATAACCGTGCTACTGATCTGGAACATCGTGCCGATTCAACTGAAGGTGCTATTCGTGAAACCAACAAACAGTTGGAAGTAACTGATTCTCGCAGTATTAACAATGCTGAACGTTTAGATGGTGTAGAAGCCAAAAACGCTGAGCAAGATACCGCTATCGCTGGTAAAGCTGACCAATCAGCATTGGATAAAGAAGTAACTGATCGTCAGAATGCCGATACTGCGTTGAAGAACAATATTGATCAGAACAAAGCGGGACAAGCTGTAACTGATTCCAAACAAGATAAGGCGATCAATGGTAAAGTAGACAAGTCTACCTATGCTGTTGATAAGGCAGTTCAAGGTATCCATGACGCATTACAAGATGGTGCGATTATTGGCCTTGAAGTATCAAAAGCTGATAAGTCCGATCTGAACAAAGAAACTGCGGATCGTGTCAAAGGTGATAAAGCACTGGATGACAAGATCAATAAAGCAGTATCAGACCAGGCCAGTACTGATAACGCACAAAACGCTGCGATTGGTAAAGAAGTAACTGATCGTCAAAAAGCTGATACTGCGTTGAAGAACAATATCGATCAGAACAAAGCGGCTCAAGCCAAAACTGATGCTAAGCAAGACAAAGCATTGAGTGATGAAGCAAAGACTCGTTCTGATGCTGATAAACAGTTACAGGCTAATATCGACAAAAACAAATCTGACCAAGCAAAAACCGACGCGAAGCAAAATGCCGCAATTGACAGTAAAGTAGATAAATCTACCTACGCTGTTGATAAAGCTAAGCAAGCTGTTCACGATGCCGTTCAGGATGCTGCGATTGTTGGTCTTGCTGTAACTAAAGCTGACAAAGCTGATCTGAATAAAGAAGTAGCAGCCCGTAAAGATGCTGACAAAGTACTTCAATCCAATATTGATTCTGAAGCCCAAACTCGTGCTACCGCCGATACTGCGTTGAAGAACAATATTGATCAGAACAAAGCGGATCAAGCTGTAACTGATGCTACACAAGATAAGGCTCTCAGTGCTGAAACTGATAACCGTATCGCTGGTGACACTGCCCTGAAAGCAAACATCGCCAAGAACAAAGCCGACCAAGCAGTAACCGATTCCGATCAGGATAAGGTTATCGCAACTAAGGCAAGTAAGAAAGAACTGGCAAGTGAAACCGTGGCACGTCAGAACGCCGATAAAAACCTTCAGGCGAACATTGATACTGAGTCTAGTACTCGTGCCAATGCGGATAATGCCCTGAAAGCTAATATCGACAAAAACAAATCTGACCAGGCTGTAACTGATTCCAATCAGGATAAGGTTATCGCAACTAAGGCGAGTAAGAAAGAACTGGCAAGTGAAACTGCGTCACGCAAATCTGCTGATGCTAAGTTGTCCAGCCGGATCGATTCTAACGATGCTACGTTAGTACAACACGATGAACGTATCACCAGCAATACTAACCGTATTGGTTCTGTTGAAAAGCGTGTATCTAACTTCGAAAACCAAACGAACCGCCGTTTCTCAGACATTGATAAACGTATTGGTGATAATCGTAAGGTAGCAAGTGCTGGTATCGCTGGTGCTGGTGCGATGGCAAACATCCCACAGGTAACTCAGAACGGCAACGTATCTGTAGGTGCGGGTATTGGTGGTTATGATGGTGAACAAGCAGTAGCTGTGGGCTTCAGTGCTCGTGTAAGCGAAAGTGTCACCACTAAGGTATCTGTCAGTACTAACACTCAGTCTGAAGTACTGTGGGGTGCTGGTGTAGGCGTAGAGTGGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)