Protein

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Genbank accession
WRQ05293.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,70
Seq2Symm
C3 confidence 0,958
C3 0,958
C1 0,277
C6 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MYMADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDTWVETETYPVGALVKVNADNMLYRCLVQNINMPPSANPTQWRPVLDLTAATAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDEKNASQWGRTKGKRVIAMREKVNNTWGEWSYSYGPDNKPTAAELGINQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVVTAARWGSVPMSHIQHILVAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:446 AA
molecular weight: 47678,89620 Da
isoelectric point:6,32546
aromaticity:0,08072
hydropathy:-0,19484

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WRQ05293.1
1 446 aa
Domain Start End Length (AA) Confidence
N-terminal 1 228 228 0,7878
Central domain 229 427 200 0,0541
C-terminal 428 446 18 0,9992
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage vB_EcoM_SD350 [NCBI] · taxon 3108096
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
WRQ05293.1 [NCBI]
Genbank nucleotide accession
OR911937.1 [NCBI]
CDS location
range 29896 -> 31236
strand +
CDS
ATGTATATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCTGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGAGGCTGGGGTGCAACCCTTGGCTACTCGGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATCGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAGGGTGTTGATACATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTGTACCGTTGTCTGGTGCAGAACATTAATATGCCACCGTCTGCTAACCCTACACAGTGGCGCCCTGTACTTGACCTGACTGCTGCAACTGCTGCAGCACGACAGGTTGGTAAGGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGCTTAGGTGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCGTCAGGTACGGGCGGACCTACTAACGGTGTTGAGACTGAGATTCTGCATATCAACTGGGATGAGAAAAACGCTTCACAGTGGGGACGCACCAAGGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAATAATACCTGGGGCGAATGGTCGTACTCTTACGGGCCTGATAATAAACCTACAGCAGCTGAGCTGGGTATTAACCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGCGGTAACTTAGGTACTGTTGGCTGGCTGCATATTGCACGTACTACTTCCGACTTGCTACGTGCTGCTAACTCCGCCGGCGTAGGTACTGTTGAGTACTCTGGCAACATCGCAGGTGGTACTGCTGTTCAGGAGTTGCTTACTTCAGTTTCTGTCGCGGCCAACAGTAACGTTGTCACTGCGGCTCGCTGGGGGTCTGTACCTATGTCGCACATCCAGCACATCCTTGTGGCTGGCGGTGCTACGCAGATTAACATGGCGGTATGTCGTCCTGGTGGTATTGCCGACCGCCGTACAGTAGCTTTACAGGTGGATGGTCTTAACAGCCGAGTAACTACCACAAATAGCTTTATTTTATGTGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCAGCTGGTGTATCTGAGTCAACGTTCTACCCAGGCCATGTAATGACTGGCTGGCGCTTCGGCAATAAGAAAGAGCTGCGCGGTGGTACATACTGGTCAGCGCCGTTACAGTATTATATCAACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Genome Context

Tertiary structure

WRQ05293.1
ESMFold structure
Source ESMFold
pLDDT 66.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Biological and genomic characteristics of a broad-spectrum avian Escherichia coli bacteriophage Pang,Z., Cao,S. and Li,Y. 2024 — GenBank