Protein

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Genbank accession
YP_010748078.1 [GenBank]
Protein name
neck whiskers protein
RBP type
TF
Evidence RBPdetect2
Probability 0,55
Seq2Symm
C1 confidence 0,391
C1 0,391
C2 0,165
I 0,004
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MVDVIKRRIVGVSDGSPQDGQVEIDMENVMPLRFSTGLNDTTAVTAGQAITLTVVLADGMDPKTVQWYKDNNAISGATDLTYTKANSVAADSGTYKVVAQDGYGNIISDSTVVTVS
Physico‐chemical
properties
protein length:116 AA
molecular weight: 12217,50400 Da
isoelectric point:4,25419
aromaticity:0,05172
hydropathy:-0,04828

Taxonomy

Phage
Salmonella phage SHWT1 [NCBI] · taxon 2759195
Uroviricota Caudoviricetes Sarkviridae Jerseyvirus Jerseyvirus SHWT1
Host
Salmonella sp. [NCBI] · taxon 599
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_010748078.1 [NCBI]
Genbank nucleotide accession
NC_073207 [NCBI]
CDS location
range 27287 -> 27637
strand -
CDS
ATGGTTGATGTAATTAAACGTCGTATTGTTGGGGTATCTGATGGCAGCCCGCAGGACGGGCAGGTAGAGATTGATATGGAAAACGTGATGCCGTTGCGTTTCTCTACTGGTCTAAATGATACTACTGCGGTAACCGCAGGTCAGGCTATAACCCTGACCGTTGTACTCGCTGACGGAATGGACCCTAAAACGGTTCAATGGTATAAGGATAATAACGCAATCTCCGGTGCAACAGACCTTACCTACACGAAGGCTAACTCCGTAGCCGCGGACTCAGGTACTTACAAAGTCGTCGCACAAGACGGGTACGGCAACATTATCTCGGATAGCACAGTAGTAACCGTAAGTTAA

Genome Context

Tertiary structure

YP_010748078.1
ESMFold2 structure
Source ESMFold2
pLDDT 76.2
Oligomeric state monomer
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