Protein

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Genbank accession
WMM95392.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSNARDKANIPVLNFQSKGIDDNATSTVLTITSGTDVQIGSTNSGVGGTIDLSIGNTSSSGGITLWSTTTSSHSIGFADGYTGTDRYRGYLEYTHSGDSMRFGTASSEKMRLNSTGLGIGTSSPLATLHVDTSNSAVAPNAEADDFFVEGNSHSGITIGSGSSHRSSIYFANSSDNDIARIVVSHAEGSMRFNNNASERMRITSGGNLIIGDTTEADARTGKLKVRNDVDYSSTEFEDDATILVQNETNNNSASIVFHSNNASGSSKRSAIIGGFIKDTDTAIGFYGAIENKTTSSNPDVIINSSGQVGIGTSSPSKPLEIVSSAQTTLLHLNSTAGTTSAITFENTGSNDSITIGAENDDLKLRTDDGVIKFFTNENSEKMRIDSSGNVGIGTTSPTPPTAYGGLHINSQYPVLKLSSTTSGTGVADGFTVRINSADDAQLWHYENKNMSFATNNAERMRITSDGRFGMNGRTNPQYTLEFGDSGTGNGWSINAENNVHKIRTRASAGDTQTHVQWENTNGIVGSVKTNGSATQYNTSSDYRLKENVSYDFDATTRLKQLKPARFNFIADDTDTLVDGFIAHEVSTIVPEAVSGAKDSMFAEVLYEEGDELPEGKNVGDVKTSAQIDPQGIDQSKLVPLLVKTIQELEARITTLEANNP
Physico‐chemical
properties
protein length:660 AA
molecular weight: 70091,45560 Da
isoelectric point:4,83486
aromaticity:0,06364
hydropathy:-0,46697

Domains

Domains [InterPro]
DC_1386
STR
1–249
DC_1386 DC_1815 IPR030392
DC_1367
RBD
422–660
DC_1367
IPR030392
CHP
540–593
IPR030392
WMM95392.1
1 660
Architecture
STR
STR
RBD
STR 1-249 | STR 326-443 | RBD 444-660
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95392.1
1 660
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0038
Central domain 11 209 200 0,0482
C-terminal 210 660 450 0,9482
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-660

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC134P
[NCBI] 		3072836 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95392.1 [NCBI]
Genbank nucleotide accession
OR420744.1 [NCBI]
CDS location
range 35534 -> 37516
strand +
CDS
ATGAGTAACGCAAGAGATAAAGCTAACATACCAGTATTAAATTTTCAATCTAAAGGTATAGATGATAATGCTACAAGTACAGTATTAACAATTACAAGTGGTACAGATGTTCAAATCGGTTCAACTAATTCTGGTGTAGGTGGTACAATAGATTTATCTATAGGAAATACATCTTCATCTGGTGGTATAACTTTATGGTCTACTACAACTTCGTCTCACTCTATTGGATTTGCTGATGGATATACTGGAACAGATAGATACAGAGGTTATTTAGAATACACACATAGTGGCGATAGTATGCGATTTGGTACAGCAAGTTCAGAAAAAATGAGATTAAATTCTACTGGATTAGGTATTGGTACAAGTTCTCCATTAGCTACACTTCATGTTGATACTTCTAATAGTGCTGTAGCACCTAATGCCGAAGCAGATGATTTCTTTGTAGAAGGTAATAGTCACTCAGGAATAACCATTGGCTCTGGTTCAAGTCATCGTTCTAGCATTTATTTTGCAAACTCAAGTGATAATGATATTGCTAGAATTGTAGTTTCTCATGCTGAAGGTAGTATGAGATTTAATAATAATGCTTCAGAACGTATGCGTATCACATCAGGTGGTAATTTAATAATTGGAGATACTACAGAAGCAGATGCAAGAACAGGAAAATTAAAAGTACGAAATGATGTGGATTATTCCTCAACTGAATTTGAAGATGATGCAACAATTTTAGTTCAAAATGAAACAAACAACAATTCTGCATCTATAGTATTTCATTCTAATAATGCTTCTGGTAGTTCCAAACGTTCTGCAATTATTGGTGGATTTATAAAAGATACTGATACTGCTATTGGTTTTTATGGAGCTATTGAAAATAAAACAACATCTTCAAATCCAGATGTAATTATCAACAGTTCTGGTCAAGTTGGCATCGGAACGTCATCGCCATCGAAACCATTAGAAATTGTTAGTTCTGCACAAACAACTTTATTACATTTAAATTCTACAGCAGGAACAACTTCAGCTATAACTTTTGAAAACACAGGCTCTAACGACAGTATTACTATTGGTGCTGAAAATGATGATTTAAAATTAAGAACTGATGATGGTGTTATAAAATTCTTTACTAATGAAAATAGTGAGAAAATGCGTATAGACAGTTCTGGTAACGTAGGTATTGGTACAACTTCTCCAACACCACCAACTGCTTATGGTGGATTACATATTAACTCTCAATATCCAGTATTAAAATTAAGTTCAACCACTTCTGGTACTGGTGTTGCAGATGGTTTTACAGTTAGAATTAATAGTGCTGATGATGCACAGTTATGGCATTACGAAAATAAAAATATGTCATTTGCTACTAATAACGCAGAACGTATGCGTATTACTAGTGATGGAAGATTTGGAATGAATGGTAGAACAAATCCTCAATATACTTTAGAATTTGGAGATAGTGGTACTGGAAATGGGTGGTCTATAAATGCTGAAAATAATGTACACAAAATAAGAACAAGAGCATCAGCAGGGGACACTCAAACTCATGTTCAATGGGAAAATACTAATGGTATTGTTGGTTCAGTTAAAACAAATGGAAGTGCCACTCAATATAACACTTCTTCCGATTACAGATTAAAAGAAAATGTATCTTATGACTTTGATGCAACAACAAGATTAAAACAATTGAAACCTGCAAGATTTAATTTTATAGCAGATGATACAGATACTCTTGTTGATGGTTTTATAGCACATGAAGTATCTACTATAGTGCCTGAAGCTGTTAGTGGTGCAAAAGATAGTATGTTTGCTGAAGTTCTATATGAAGAAGGTGATGAATTACCTGAGGGTAAAAATGTTGGTGATGTCAAAACATCTGCACAAATAGACCCACAAGGTATCGACCAATCTAAATTAGTACCTTTACTGGTTAAAACAATTCAAGAATTAGAAGCTAGAATAACAACACTAGAAGCTAATAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c89132a49cbc153687bc59fa88a0bd13f5ab34aa44d9ed705d6ad126a4e5aa8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6901
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50