Phage RBP Database

Genbank accession

WMM95392.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,86

TSP

Evidence RBPdetect2

Probability 0,66

Seq2Symm

C3 confidence 0,998

C3	0,998
C1	0,028
D3	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSNARDKANIPVLNFQSKGIDDNATSTVLTITSGTDVQIGSTNSGVGGTIDLSIGNTSSSGGITLWSTTTSSHSIGFADGYTGTDRYRGYLEYTHSGDSMRFGTASSEKMRLNSTGLGIGTSSPLATLHVDTSNSAVAPNAEADDFFVEGNSHSGITIGSGSSHRSSIYFANSSDNDIARIVVSHAEGSMRFNNNASERMRITSGGNLIIGDTTEADARTGKLKVRNDVDYSSTEFEDDATILVQNETNNNSASIVFHSNNASGSSKRSAIIGGFIKDTDTAIGFYGAIENKTTSSNPDVIINSSGQVGIGTSSPSKPLEIVSSAQTTLLHLNSTAGTTSAITFENTGSNDSITIGAENDDLKLRTDDGVIKFFTNENSEKMRIDSSGNVGIGTTSPTPPTAYGGLHINSQYPVLKLSSTTSGTGVADGFTVRINSADDAQLWHYENKNMSFATNNAERMRITSDGRFGMNGRTNPQYTLEFGDSGTGNGWSINAENNVHKIRTRASAGDTQTHVQWENTNGIVGSVKTNGSATQYNTSSDYRLKENVSYDFDATTRLKQLKPARFNFIADDTDTLVDGFIAHEVSTIVPEAVSGAKDSMFAEVLYEEGDELPEGKNVGDVKTSAQIDPQGIDQSKLVPLLVKTIQELEARITTLEANNP

Physico‐chemical properties

protein length:	660 AA
molecular weight:	70091,45560 Da
isoelectric point:	4,83486
aromaticity:	0,06364
hydropathy:	-0,46697

Domain architecture

WMM95392.1

1 660 aa

CHP 540–659 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR030392
CHP

IPR030392

IPR030392
CHP

IPR030392

WMM95392.1

1660 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1386
STR

DC_1386 DC_1815

DC_1367
RBD

DC_1367

WMM95392.1

1660 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR030392	CHP	DC_0088	540	659	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	540	593	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WMM95392.1

1 660 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	10	10	0,0038
Central domain	11	209	200	0,0482
C-terminal	210	660	450	0,9482

Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pelagibacter phage HTVC134P [NCBI] · taxon 3072836

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Candidatus Pelagibacter sp. HTCC7211 [NCBI] · taxon 439493

Pseudomonadota Alphaproteobacteria Candidatus Pelagibacterales Candidatus Pelagibacteraceae Candidatus Pelagibacter

Genbank protein accession

WMM95392.1 [NCBI]

Genbank nucleotide accession

OR420744.1 [NCBI]

CDS location

range 35534 -> 37516
strand +

CDS

ATGAGTAACGCAAGAGATAAAGCTAACATACCAGTATTAAATTTTCAATCTAAAGGTATAGATGATAATGCTACAAGTACAGTATTAACAATTACAAGTGGTACAGATGTTCAAATCGGTTCAACTAATTCTGGTGTAGGTGGTACAATAGATTTATCTATAGGAAATACATCTTCATCTGGTGGTATAACTTTATGGTCTACTACAACTTCGTCTCACTCTATTGGATTTGCTGATGGATATACTGGAACAGATAGATACAGAGGTTATTTAGAATACACACATAGTGGCGATAGTATGCGATTTGGTACAGCAAGTTCAGAAAAAATGAGATTAAATTCTACTGGATTAGGTATTGGTACAAGTTCTCCATTAGCTACACTTCATGTTGATACTTCTAATAGTGCTGTAGCACCTAATGCCGAAGCAGATGATTTCTTTGTAGAAGGTAATAGTCACTCAGGAATAACCATTGGCTCTGGTTCAAGTCATCGTTCTAGCATTTATTTTGCAAACTCAAGTGATAATGATATTGCTAGAATTGTAGTTTCTCATGCTGAAGGTAGTATGAGATTTAATAATAATGCTTCAGAACGTATGCGTATCACATCAGGTGGTAATTTAATAATTGGAGATACTACAGAAGCAGATGCAAGAACAGGAAAATTAAAAGTACGAAATGATGTGGATTATTCCTCAACTGAATTTGAAGATGATGCAACAATTTTAGTTCAAAATGAAACAAACAACAATTCTGCATCTATAGTATTTCATTCTAATAATGCTTCTGGTAGTTCCAAACGTTCTGCAATTATTGGTGGATTTATAAAAGATACTGATACTGCTATTGGTTTTTATGGAGCTATTGAAAATAAAACAACATCTTCAAATCCAGATGTAATTATCAACAGTTCTGGTCAAGTTGGCATCGGAACGTCATCGCCATCGAAACCATTAGAAATTGTTAGTTCTGCACAAACAACTTTATTACATTTAAATTCTACAGCAGGAACAACTTCAGCTATAACTTTTGAAAACACAGGCTCTAACGACAGTATTACTATTGGTGCTGAAAATGATGATTTAAAATTAAGAACTGATGATGGTGTTATAAAATTCTTTACTAATGAAAATAGTGAGAAAATGCGTATAGACAGTTCTGGTAACGTAGGTATTGGTACAACTTCTCCAACACCACCAACTGCTTATGGTGGATTACATATTAACTCTCAATATCCAGTATTAAAATTAAGTTCAACCACTTCTGGTACTGGTGTTGCAGATGGTTTTACAGTTAGAATTAATAGTGCTGATGATGCACAGTTATGGCATTACGAAAATAAAAATATGTCATTTGCTACTAATAACGCAGAACGTATGCGTATTACTAGTGATGGAAGATTTGGAATGAATGGTAGAACAAATCCTCAATATACTTTAGAATTTGGAGATAGTGGTACTGGAAATGGGTGGTCTATAAATGCTGAAAATAATGTACACAAAATAAGAACAAGAGCATCAGCAGGGGACACTCAAACTCATGTTCAATGGGAAAATACTAATGGTATTGTTGGTTCAGTTAAAACAAATGGAAGTGCCACTCAATATAACACTTCTTCCGATTACAGATTAAAAGAAAATGTATCTTATGACTTTGATGCAACAACAAGATTAAAACAATTGAAACCTGCAAGATTTAATTTTATAGCAGATGATACAGATACTCTTGTTGATGGTTTTATAGCACATGAAGTATCTACTATAGTGCCTGAAGCTGTTAGTGGTGCAAAAGATAGTATGTTTGCTGAAGTTCTATATGAAGAAGGTGATGAATTACCTGAGGGTAAAAATGTTGGTGATGTCAAAACATCTGCACAAATAGACCCACAAGGTATCGACCAATCTAAATTAGTACCTTTACTGGTTAAAACAATTCAAGAATTAGAAGCTAGAATAACAACACTAGAAGCTAATAACCCATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)