Phage RBP Database

Genbank accession

CAM0083391.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,95

Seq2Symm

C3 confidence 0,979 truncated

C3	0,979
C1	0,028
C6	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MNPEIQPLVENIEILNGARGSGLDRAVLLRDLVDLGLAGTVKTSGGKVRPVTGTPGTGTPGGGTSPTPDPTVEDPVAPTGVYASGGFSNILIAWDSPGYKGHAYANIYRSATDDYSQAVAISQTAANLYSDTVAVGATWYYWIRFVNKNDKEGPIQSTNGVKGTTSAAIGDILDQLKGEIDETFFTPVFNTRLDDTDKDIQQLFGDVTNIDNKFTDKFVQVEDQFVEFDGKFVDVNSIIDELKEAGEIIAEAAMSAAVGVEIESDTRRKITARIEEKQRTIITDQIAMAEDIKTVTATVDDNKAQISINNTALVELDKDTKEAVKTITERLDTQQSNIDDNKASITNQQQTLVSVQDSVNKNTGEIDATKQDVQAVTTRLDKQQSEIDDNKATITTQQQTIITIDGKVTGNADDIKDTADKVEVITQRVDTLTSEVGDNKAQISQTQQTLITIDGKVTDNEKEIGDNAKSIQVVTTRIDQQQSEIDSNKATITSQSQTIIKIDGEVQKNKADVEKAITAASNAQATADGKIDTFFQDSHPANASSGDIWFDTNDGNKQYIYHNGAWIVAQDTAIGDAILAAAGAQATADGKIETFYQPDAPTASAKGDLWVDTDDKNKLYRWSGSAWVDIHDQNIDEIKGDVEVITQRVDTMKSEVDNNTAEITDTKQTLVTIDGKVSDNANDIADANQSITTMTQRLESQQSEIDGNKASITSQAQTIVTIDGKVSQNASDIDTANKSIETITQKQDEQKSELDGAKAVIESNSQTIARIEGELGEDGDNSQEILAEAVMSSAIGVDNEGSTRRKVTARIEKQQRVIMTDQSAMAQELTIITASVADNKAEIKSVNTALVEFDKETEQALKVMTERLDTQKANIDDNTASITTQQQTIVTIDGKVQDNTEEVAKAIASASNAQATADGKIDTFFQDDEPATASEGDIWFDTNSGNKQYIYQSGSWVIAQDTEIGDAIKAAAGAQATADGKIETFYQTTPPTANAEGDLWIDTNNNDRLYRWNSLTWVDIQDKDIHKAIQDAASAQATADGKIDTFFQDGEPQAASEGDLWFDTDNGNKQHVYKNGAWIVAQDTAIGDAILAAATAQSTADGKITTFYVPDAPKAKAVGDLWVDTNDKNKLYRWSGSNWLDIQDGNINEIDGKVTVITERLDQLKSEVDGNTASITTNSQTIIEVNSKAEANESKINVVSQQLTTVESELGDTKSAVSTNSQTIAKMNADGTTAYEAQWGVKASVGDVQAGIGLVAKKNPDGTTTSQCTVLADQFSVGHVNTDGDDETIYPFIVTSEGVYIDTAYIKAATVQELVAGEVIADTVKASASITAPKIKGGTIEIGSNFSVDENGNATTNNIKGNNVHLTGYINATSGTFRGTVYATTGEFKGTVYATDGDFKGTVYANRIVGDVVTANTKKKSNSVGYFDRARVNKPTSKNRTLQFTVMVGLKAKGYRDQEGRFQPSTVEGRLKVTGTYGTRYSQIFSFSTNRSSEKSRFFPVNVSIPIPANTTGTVNIYSEKTHSVGETSVVTSAPTTDGIWTAMLFTDGSDLS

Physico‐chemical properties

protein length:	1553 AA
molecular weight:	167229,41430 Da
isoelectric point:	4,45233
aromaticity:	0,05795
hydropathy:	-0,49073

Domain architecture

CAM0083391.1

1 1553 aa

STR 79–161 · STR 300–541 · STR 629–793 · STR 1132–1233 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR013783
STR

IPR013783 PTHR18937 G3DSA:1.10.287.1490 G3DSA:1.20.5.340

SSF57997
STR

SSF57997 Coil

Coil
Unmapped

Coil

G3DSA:1.10.287.1490
STR

G3DSA:1.10.287.1490

CAM0083391.1

11553 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0308
STR

DC_0308 DC_0308 DC_0308 DC_0308 DC_0237

DC_0308
STR

DC_0308 DC_0308 DC_0308 DC_0320

CAM0083391.1

11553 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013783	STR	IPR013783	79	161	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
PTHR18937	Unmapped	-	275	526	PANTHER	STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER	-	-	-	-
SSF57997	STR	SSF57997	300	510	Merged direct domain	SSF57997	Central	Low	Positional only	14 proteins / 14 hits
Coil	Unmapped	-	366	386	Coils	Coil	-	-	-	-
G3DSA:1.10.287.1490	STR	G3DSA:1.10.287.1490	379	541	Merged direct domain	G3DSA:1.10.287.1490	Central	Low	Positional only	5 proteins / 5 hits
G3DSA:1.10.287.1490	STR	G3DSA:1.10.287.1490	629	793	Merged direct domain	G3DSA:1.10.287.1490	Central	Low	Positional only	5 proteins / 5 hits
Coil	Unmapped	-	684	704	Coils	Coil	-	-	-	-
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	1132	1233	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits

Proteins with similar domain architecture

Phage

Vibrio phage D76 [NCBI] · taxon 3105319

Viruses

Host No host information

Genbank protein accession

CAM0083391.1 [NCBI]

Genbank nucleotide accession

OZ196662.1 [NCBI]

CDS location

range 14424 -> 19085
strand +

CDS

ATGAATCCTGAGATTCAGCCGCTTGTAGAAAATATAGAGATACTTAACGGCGCAAGGGGTTCAGGCTTAGATCGAGCCGTGCTACTGCGCGACCTTGTTGATCTCGGTTTAGCCGGTACTGTAAAAACGTCGGGCGGAAAGGTTAGGCCAGTTACCGGAACGCCTGGTACTGGCACGCCTGGCGGTGGTACATCACCAACACCAGACCCAACAGTAGAAGATCCCGTTGCACCTACTGGCGTTTATGCTTCTGGTGGTTTTAGTAACATTCTTATTGCTTGGGATTCCCCAGGGTACAAAGGTCACGCATACGCTAATATTTATCGATCGGCTACTGACGACTATTCACAAGCTGTAGCTATCAGCCAAACGGCTGCGAACCTTTACAGTGATACCGTTGCGGTAGGTGCAACGTGGTACTACTGGATTAGATTTGTAAACAAGAACGATAAAGAAGGTCCGATCCAATCGACTAACGGCGTTAAGGGTACAACCAGTGCCGCTATTGGCGATATATTAGATCAGCTAAAAGGTGAGATTGACGAAACGTTTTTCACGCCTGTATTCAACACTCGACTTGATGACACTGATAAAGACATACAGCAATTATTTGGTGACGTCACAAATATTGATAACAAGTTCACTGACAAGTTTGTACAGGTTGAAGATCAGTTTGTTGAGTTCGATGGTAAATTTGTAGACGTTAACTCAATCATTGATGAGCTTAAAGAGGCTGGCGAGATCATAGCTGAAGCGGCTATGAGTGCGGCGGTAGGCGTTGAGATTGAAAGTGATACACGACGCAAGATTACAGCTCGAATTGAAGAGAAGCAGCGCACTATCATCACTGATCAGATTGCTATGGCCGAAGATATCAAAACGGTTACAGCTACGGTTGACGATAACAAAGCTCAAATAAGCATTAACAACACTGCGCTGGTTGAGCTTGATAAGGACACCAAGGAAGCGGTTAAGACAATTACCGAGCGATTGGATACCCAACAATCAAACATTGACGACAACAAAGCGTCTATCACCAACCAGCAGCAGACACTTGTAAGCGTTCAGGACTCCGTAAACAAAAATACCGGGGAAATAGATGCTACTAAACAAGACGTTCAAGCAGTAACAACGAGGCTTGATAAACAACAGTCTGAGATTGACGATAACAAAGCGACGATCACCACGCAGCAGCAAACCATCATTACCATTGACGGTAAGGTTACTGGTAACGCTGACGACATCAAGGACACCGCCGATAAAGTTGAGGTGATTACACAGCGTGTTGATACGTTAACCTCTGAAGTTGGCGACAACAAAGCACAAATATCTCAAACGCAACAAACGTTAATCACCATTGACGGCAAGGTTACGGACAACGAAAAGGAAATAGGCGATAACGCTAAGTCCATTCAAGTGGTAACTACTCGAATTGATCAGCAGCAATCTGAAATTGATAGCAACAAGGCTACCATTACCAGCCAGTCTCAAACGATCATTAAGATTGATGGTGAAGTTCAGAAGAACAAAGCAGACGTTGAGAAAGCAATTACCGCCGCGTCTAATGCGCAAGCAACTGCAGACGGCAAGATCGATACGTTTTTCCAAGACTCACACCCTGCTAATGCGAGTAGTGGTGACATTTGGTTCGACACTAACGACGGCAATAAGCAATACATTTACCACAACGGTGCTTGGATTGTTGCGCAGGATACTGCTATCGGTGATGCGATTCTTGCGGCGGCAGGAGCACAAGCAACAGCAGACGGTAAGATCGAAACCTTCTACCAGCCAGATGCACCGACGGCAAGCGCTAAGGGCGACTTATGGGTAGACACTGACGATAAAAATAAACTTTATCGTTGGAGCGGATCAGCTTGGGTTGATATTCACGATCAGAACATTGATGAGATCAAAGGTGACGTTGAGGTAATAACGCAACGTGTCGACACAATGAAGTCAGAGGTTGATAACAACACCGCTGAAATCACAGACACAAAGCAAACCTTAGTAACTATTGACGGTAAGGTATCCGATAACGCCAATGACATTGCAGATGCAAATCAAAGCATCACAACAATGACGCAGCGCTTGGAAAGCCAGCAATCAGAAATAGATGGTAACAAGGCCAGCATTACCAGCCAGGCACAAACGATCGTTACTATTGACGGCAAGGTTAGCCAAAACGCTAGCGATATCGACACGGCTAATAAATCGATTGAAACTATCACGCAAAAGCAAGACGAACAGAAGTCCGAGCTTGATGGTGCGAAAGCTGTTATTGAATCTAACTCTCAAACTATCGCTAGAATTGAGGGTGAACTTGGTGAGGATGGAGACAACTCTCAAGAGATACTAGCTGAAGCTGTGATGAGCTCTGCTATTGGTGTTGATAACGAAGGCTCGACACGACGCAAAGTAACCGCACGAATTGAGAAGCAGCAGCGAGTGATCATGACCGATCAATCCGCTATGGCTCAAGAGTTGACGATAATCACGGCAAGCGTCGCAGATAACAAGGCAGAAATTAAAAGCGTAAACACTGCGCTAGTTGAGTTTGACAAAGAGACAGAGCAAGCGCTCAAGGTAATGACTGAGCGACTAGACACGCAAAAGGCAAACATTGACGATAATACGGCCTCTATCACTACTCAGCAGCAAACAATCGTAACCATTGACGGAAAGGTACAGGACAATACTGAAGAAGTAGCCAAGGCTATTGCTTCAGCTTCTAACGCTCAAGCAACAGCTGACGGTAAGATTGATACGTTTTTCCAAGATGACGAGCCAGCAACAGCAAGCGAAGGCGATATTTGGTTCGATACTAATAGCGGTAACAAACAGTATATTTATCAAAGCGGCTCTTGGGTAATCGCTCAAGACACTGAGATCGGAGACGCAATAAAAGCGGCTGCGGGCGCACAAGCTACAGCTGACGGCAAGATTGAAACGTTCTACCAAACGACACCACCGACGGCAAATGCTGAAGGTGATCTATGGATTGATACAAATAACAACGATCGCCTATATCGTTGGAACTCGCTTACCTGGGTTGATATTCAAGACAAGGATATTCACAAGGCCATTCAAGATGCAGCGAGCGCACAAGCTACAGCTGACGGCAAGATTGACACCTTCTTTCAAGATGGTGAGCCGCAAGCAGCAAGCGAAGGTGATCTTTGGTTTGATACTGATAACGGGAACAAGCAGCACGTTTATAAAAACGGCGCTTGGATTGTCGCTCAAGATACAGCTATCGGTGACGCAATCCTTGCAGCAGCTACGGCCCAATCAACTGCAGACGGGAAGATCACAACGTTCTATGTCCCAGATGCACCAAAAGCTAAAGCGGTTGGCGATCTTTGGGTAGACACCAATGACAAGAACAAGCTTTACCGTTGGAGCGGTAGCAACTGGTTAGATATTCAAGACGGCAATATTAACGAGATTGACGGAAAGGTTACGGTAATCACTGAAAGACTGGATCAGTTAAAATCAGAGGTTGACGGAAACACAGCAAGTATCACAACAAACAGTCAAACTATTATTGAGGTAAACAGCAAGGCAGAAGCTAACGAAAGCAAAATAAACGTAGTATCTCAGCAGCTAACAACAGTTGAGAGTGAGTTAGGTGATACTAAGTCGGCGGTTTCTACAAACAGCCAAACTATTGCCAAAATGAATGCAGACGGTACAACGGCATACGAAGCGCAATGGGGAGTTAAAGCAAGTGTTGGTGATGTTCAAGCGGGTATCGGTTTAGTTGCTAAGAAGAACCCGGACGGCACAACCACTTCACAATGTACTGTGCTGGCGGATCAGTTCTCAGTTGGCCATGTAAACACTGACGGGGATGACGAGACAATTTACCCGTTTATCGTTACGTCAGAAGGGGTTTACATTGATACTGCTTACATCAAGGCGGCTACTGTTCAGGAGCTTGTTGCTGGTGAAGTTATTGCTGATACCGTTAAAGCGTCTGCTTCAATCACTGCACCTAAAATAAAAGGCGGCACAATTGAGATAGGCAGTAACTTTAGCGTTGACGAAAACGGCAATGCTACAACGAACAACATTAAAGGCAATAACGTTCATCTTACTGGTTATATCAATGCAACATCCGGCACGTTCAGGGGGACTGTTTACGCGACCACAGGAGAGTTTAAAGGCACTGTTTATGCGACTGATGGTGATTTTAAAGGCACTGTATATGCTAATAGAATTGTCGGTGATGTAGTTACAGCGAATACAAAAAAGAAATCTAATAGTGTGGGGTATTTTGACAGAGCAAGGGTAAATAAACCGACAAGCAAAAATAGAACTTTGCAATTTACGGTTATGGTAGGGCTAAAGGCTAAGGGTTATAGAGATCAAGAGGGCAGATTCCAACCAAGTACCGTAGAGGGTAGGCTTAAAGTTACAGGCACCTACGGGACCAGATATTCTCAAATATTTAGCTTTTCCACAAATAGAAGTTCTGAGAAATCTAGATTTTTTCCTGTAAATGTCAGTATTCCTATTCCTGCAAACACAACCGGCACCGTTAATATATATTCAGAGAAAACACATAGCGTCGGGGAAACTAGCGTAGTGACTAGCGCTCCAACTACTGACGGTATTTGGACAGCAATGTTATTCACAGATGGCAGCGATCTATCATAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)