Phage RBP Database

Genbank accession

WAK45798.1 [GenBank]

Protein name

tail collar protein

RBP type

TF

Evidence RBPdetect

Probability 0,87

TF

Evidence RBPdetect2

Probability 0,98

Seq2Symm

C3 confidence 0,989

C3	0,989
C1	0,143
I	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MVRKVFNDGDILYAEDVNIIGQPFVDGLDQLGHGLKVDDNSLDDSPDQIKARFYSWYNRFRVTIQSGLTLSVTQGSISVSGNIISFPPQTINAIDNANSFVWIGKTDVDPAIALRVSQTLPDVCIPLARIIAASGSITSVTDLRDVSVDVLPPSIPDAVPVGSTIISLIPPTSPAPTGYLELLNSAQNVSRITYSALFAAWGTYYGAGDGSTTFGVPGTNGRFMRLIGTGLSVGGIGGSNQITIPVNALPAHQHGIPANTHTHGVSQTPHGHGVSQTPHGHNTVDAGHSHGVPFGAASDNGSTAFDTGGNPYNNGIGTTQSQSNVSVSPGNANIGIDGSNANISIQSASTGLTSTNNTGDGQAFQHDQPYLVFRVFVKV

Physico‐chemical properties

protein length:	379 AA
molecular weight:	39441,17480 Da
isoelectric point:	5,36767
aromaticity:	0,06860
hydropathy:	-0,07704

Domain architecture

WAK45798.1

1 379 aa

ATT 152–224 · STR 225–303 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083

WAK45798.1

1379 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0891
STR

DC_0891

WAK45798.1

1379 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	152	219	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	157	303	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	172	224	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

Anabaena phage YongM2 [NCBI] · taxon 2996064

Viruses unclassified bacterial viruses

Host No host information

Genbank protein accession

WAK45798.1 [NCBI]

Genbank nucleotide accession

OP834087 [NCBI]

CDS location

range 59193 -> 60332
strand -

CDS

ATGGTACGTAAAGTTTTTAACGACGGTGACATTCTTTATGCAGAAGATGTAAATATTATAGGTCAACCGTTTGTTGACGGTCTAGATCAATTAGGACATGGTTTAAAAGTTGATGACAATAGCTTAGATGATTCACCGGATCAGATAAAAGCTCGCTTTTATTCTTGGTATAACCGCTTTCGAGTCACTATACAAAGCGGTTTAACGCTTTCGGTCACTCAGGGTAGTATCAGCGTTTCAGGAAACATTATCAGTTTTCCGCCTCAAACTATCAATGCAATAGACAACGCTAATAGCTTTGTATGGATAGGTAAAACCGATGTAGATCCAGCGATCGCTTTAAGAGTTTCACAGACTTTGCCAGATGTTTGTATACCATTAGCCCGGATAATCGCCGCAAGCGGTTCTATAACGTCCGTGACAGATTTACGTGATGTTTCAGTTGATGTTTTGCCCCCGTCCATACCCGATGCTGTTCCAGTGGGTTCTACCATCATTTCTTTAATTCCTCCAACATCACCAGCCCCAACCGGATATTTAGAATTGTTGAACAGCGCTCAAAACGTTTCCAGAATCACTTACAGCGCTTTATTTGCAGCGTGGGGAACTTATTATGGTGCAGGTGATGGATCTACTACTTTTGGCGTTCCTGGTACAAACGGCCGTTTTATGAGGTTAATAGGCACTGGTTTATCTGTTGGTGGAATCGGTGGGAGTAATCAGATAACTATACCGGTGAACGCTTTGCCAGCACATCAGCACGGTATACCAGCAAACACCCACACCCACGGAGTAAGCCAAACCCCGCACGGTCACGGAGTAAGCCAAACCCCGCACGGTCACAATACTGTTGATGCTGGCCATAGTCATGGTGTCCCGTTTGGCGCTGCTTCTGATAACGGTTCAACAGCTTTTGATACTGGGGGAAACCCTTATAATAATGGTATAGGAACCACACAAAGCCAAAGTAATGTTAGTGTTTCTCCAGGCAATGCAAACATAGGTATAGACGGATCTAACGCCAACATATCAATACAAAGCGCTTCCACAGGTTTGACATCCACTAATAATACTGGGGATGGTCAAGCTTTCCAACATGATCAACCTTATTTAGTTTTTAGAGTATTTGTAAAAGTTTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)