Phage RBP Database

Genbank accession

XYY30666.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 1,00

Seq2Symm

C3 confidence 0,779

C3	0,779
C1	0,636
C2	0,013

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTMEPGEYAVSVTVRGKSQVYGRVRIDGTESSVTLNMLLRRSLVEVSISDELLTDFRQIQNNVADDLTTIRELKEESVKNNTGLTQARESAEASARSASESAATATARAEETEQKAEEAKASATNAAASAEEARQHAENAQSAQATAEDVLERAEAAVVSAEEARSMAENARGPKGDTGPKGDTGPRGETGPAGPQGPTGARGETGPQGSVGPAGPRGEKGEQGERGPQGLQGLKGETGERGPQGVQGPAGPTGATGPAGPRGERGEQGIQGPAGATGPVGPQGERGIQGPAGPAGPRGETGARGEKGDPGDPGGPPGPKGDTGPAGPAGEKGEPGERGPQGLQGPPGPAGERGPTGEAGPAGQPGPKGDPGPAGPQGPAGERGAQGPQGVAGPVGPAGAAGAKGDKGDPGPAGPQGQPGPQGPAGETGPAGEPGPRGEPGPQGLKGDRGEPGPTGPQGPAGERGPQGPQGVAGPVGPAGAAGAKGDKGDPGPAGPQGQPGPQGPAGETGPAGEPGPRGEPGPQGLKGDRGEPGPTGPQGPAGERGPQGPQGVAGPVGPAGEPGAKGDKGDPGGTELLASANTWTQPQTINGDLTVTGNGSFNDVQIRSDKRNKRNAIRIDNCLEKLDLLTGYLYEIQNADGSWQQSVGLFAQDALKAQPELVTSDTDIISGEERFRLNYNGVIALLVEGIKNLRKEISDLKEK

Physico‐chemical properties

protein length:	704 AA
molecular weight:	69453,55470 Da
isoelectric point:	4,82440
aromaticity:	0,01562
hydropathy:	-0,90156

Domain architecture

XYY30666.1

1 704 aa

STR 172–225 · STR 315–373 · STR 513–571 · CHP 609–704

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil IPR008160 IPR050149 IPR030392

IPR008160
STR

IPR008160 IPR008160 IPR030392 Coil

XYY30666.1

1704 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1202
STR

DC_1202

XYY30666.1

1704 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	56	76	Coils	Coil	-	-	-	-
Coil	Unmapped	-	95	171	Coils	Coil	-	-	-	-
IPR008160	STR	DC_0536	172	225	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR050149	Unmapped	-	299	573	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	315	373	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	513	571	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR030392	CHP	DC_0088	609	704	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	609	664	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	684	704	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Escherichia phage vB_EcoP_phi367 [NCBI] · taxon 3411876

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XYY30666.1 [NCBI]

Genbank nucleotide accession

PV189406.1 [NCBI]

CDS location

range 8553 -> 10667
strand +

CDS

ATGACGATGGAGCCGGGGGAGTATGCGGTTTCCGTAACGGTGAGAGGTAAAAGCCAGGTCTATGGCCGGGTACGCATTGACGGAACGGAAAGTTCGGTGACGCTCAACATGCTGCTGAGGCGCAGTCTGGTCGAGGTGAGTATCAGTGATGAACTGCTGACAGATTTCCGGCAGATACAGAACAACGTTGCAGATGACCTTACCACTATCCGGGAACTGAAAGAAGAGTCAGTGAAGAACAACACCGGACTCACGCAGGCCAGGGAAAGTGCGGAAGCCAGTGCCCGGTCGGCATCGGAGAGTGCTGCGACAGCAACGGCCCGCGCCGAAGAGACAGAACAGAAAGCAGAAGAGGCCAAAGCGTCTGCGACAAATGCGGCTGCGAGTGCGGAAGAGGCCAGACAGCACGCGGAAAATGCGCAGAGTGCACAGGCGACTGCCGAAGATGTCCTTGAGCGGGCAGAGGCCGCAGTAGTCAGCGCAGAGGAAGCCCGAAGCATGGCTGAGAATGCCAGAGGCCCCAAAGGTGATACCGGACCGAAAGGTGATACGGGTCCTCGAGGGGAAACAGGTCCGGCGGGCCCTCAGGGGCCAACAGGTGCGCGCGGTGAGACAGGTCCTCAGGGTAGTGTCGGCCCGGCAGGTCCGCGGGGTGAGAAAGGCGAGCAGGGGGAGCGTGGACCACAGGGATTACAGGGGCTGAAAGGTGAAACCGGAGAACGTGGACCTCAGGGGGTACAGGGCCCGGCAGGCCCGACAGGAGCAACCGGACCGGCGGGTCCACGGGGTGAACGTGGTGAACAGGGCATACAGGGGCCAGCCGGAGCAACAGGACCTGTTGGGCCACAAGGAGAGCGCGGTATTCAGGGGCCTGCAGGTCCTGCGGGCCCGCGAGGTGAAACCGGAGCCAGAGGTGAAAAAGGAGACCCCGGGGACCCCGGCGGCCCACCGGGACCAAAGGGTGATACCGGACCTGCTGGCCCTGCCGGTGAAAAAGGCGAACCCGGTGAGCGTGGGCCTCAGGGATTACAGGGGCCACCGGGTCCAGCCGGAGAGAGAGGGCCGACAGGCGAAGCCGGACCTGCGGGTCAACCGGGGCCCAAAGGAGACCCGGGTCCTGCTGGCCCACAGGGACCGGCGGGAGAGCGGGGAGCTCAGGGGCCTCAGGGTGTAGCTGGTCCTGTCGGCCCGGCAGGTGCAGCGGGCGCGAAAGGCGATAAAGGTGACCCCGGACCTGCTGGTCCTCAGGGGCAGCCCGGTCCTCAGGGACCTGCTGGCGAAACCGGACCCGCGGGTGAACCCGGGCCAAGAGGTGAGCCCGGTCCACAGGGACTTAAAGGTGACAGGGGCGAGCCAGGACCTACAGGCCCACAGGGACCGGCGGGAGAGCGGGGACCTCAGGGGCCACAGGGTGTAGCTGGTCCTGTCGGCCCGGCAGGTGCAGCGGGCGCGAAAGGCGATAAAGGTGACCCCGGACCTGCTGGTCCTCAGGGGCAGCCCGGTCCTCAGGGACCTGCTGGCGAAACCGGACCCGCGGGTGAACCCGGGCCAAGAGGTGAGCCCGGTCCACAGGGACTTAAAGGTGACAGGGGCGAGCCAGGACCTACAGGCCCACAGGGACCGGCGGGAGAGCGGGGACCTCAGGGGCCACAGGGTGTAGCTGGTCCTGTCGGCCCTGCAGGCGAACCGGGAGCGAAAGGCGATAAAGGTGACCCCGGAGGAACCGAACTGCTTGCTTCAGCCAATACATGGACTCAACCACAAACTATTAATGGCGATTTGACGGTAACCGGAAACGGCTCATTTAACGATGTTCAGATCCGTTCGGATAAACGTAACAAGCGAAATGCAATACGAATAGATAATTGTCTGGAGAAGCTTGACCTGCTAACGGGTTATTTGTATGAAATACAGAATGCTGATGGCAGTTGGCAACAATCTGTGGGATTATTTGCACAGGATGCGTTAAAGGCTCAACCAGAGTTAGTTACATCTGATACAGATATCATATCTGGAGAAGAGAGATTTCGATTAAATTATAATGGTGTTATTGCACTGTTAGTTGAAGGAATAAAAAATCTGCGTAAAGAGATTAGCGACCTTAAAGAGAAATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)