Protein

View in Explore
Genbank accession
WPK37749.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Seq2Symm
C1 confidence 0,999
C1 0,999
C3 0,028
C2 0,006
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSVTQTWRTGVPTPGVLRTYPPNPLYVDTVRGSAAGTGSLNNPVNSLSLALGLCAGLPDYVIKIAAPETNPLRQEVIFDTSMNVFLEGIDNEPWHIYGSEMHTSGWVLSGNIYSKVINYTSVMQVVVTTMTETIADKDDFYLKLVQNTTTPTTPGLGQYGYSGSTIYVRLPDDSDPNTHQIEVSRRNFGVGTVGFGLLTVRDVVSRYCMINGISCGLSTQPAGTGFLTVYDSVVEYCANGGVGGTGRNERIECTNVKAYRISNDGFGQHAPTGGAGLMILNGCDGSYNGDAPGQSAQGASNHETTTMILNGGTFNHNVSGGMVVIESGTCDIHGDTEYGPVVMDGNMRLGNTAGTIANQAGCAWLDNAKGTVTGSVTVKNGLGIGVKRASTAIVDGISNIISENNAFPDQL
Physico‐chemical
properties
protein length:411 AA
molecular weight: 43251,87070 Da
isoelectric point:4,88153
aromaticity:0,07056
hydropathy:-0,10973

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WPK37749.1
1 411 aa
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,7143
Central domain 58 400 344 0,9609
C-terminal 401 411 10 0,1847
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage AV124 [NCBI] · taxon 3077269
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
WPK37749.1 [NCBI]
Genbank nucleotide accession
OR352954 [NCBI]
CDS location
range 108284 -> 109519
strand -
CDS
ATGAGTGTTACCCAAACTTGGAGAACAGGAGTTCCCACGCCGGGGGTCCTTAGGACATACCCACCAAACCCTCTTTATGTTGATACTGTGAGAGGTTCCGCAGCAGGAACAGGATCATTAAACAATCCTGTCAACTCCTTGTCCCTCGCACTAGGTCTCTGCGCTGGGCTTCCTGACTATGTCATAAAAATTGCTGCACCAGAAACAAACCCTTTACGCCAGGAAGTTATTTTTGATACTTCCATGAATGTTTTCTTGGAGGGTATTGACAATGAACCTTGGCACATATATGGTTCTGAAATGCATACTTCAGGATGGGTACTCTCTGGAAACATTTATTCTAAGGTTATAAATTACACATCTGTAATGCAAGTGGTTGTTACCACGATGACAGAGACAATAGCCGACAAAGATGATTTTTATCTTAAGCTTGTCCAGAATACTACCACCCCAACAACTCCAGGTTTAGGACAATACGGCTATAGTGGTTCGACAATATACGTCAGGCTTCCTGATGATTCAGACCCGAATACCCATCAAATAGAGGTTTCAAGAAGAAACTTCGGTGTCGGTACGGTTGGTTTCGGGTTACTTACGGTAAGGGATGTAGTCTCAAGATATTGTATGATTAATGGGATATCCTGCGGCTTATCAACTCAACCTGCTGGTACAGGTTTTCTAACGGTGTATGACTCTGTGGTTGAATACTGTGCTAATGGAGGCGTTGGTGGTACAGGAAGAAATGAAAGAATAGAATGTACCAATGTAAAGGCTTATCGTATAAGTAACGATGGTTTTGGACAACATGCCCCAACTGGAGGCGCTGGCCTCATGATACTCAATGGTTGTGATGGTAGCTATAATGGAGATGCTCCAGGACAATCTGCTCAAGGGGCATCTAATCATGAAACAACCACAATGATACTCAATGGTGGGACTTTTAACCATAATGTGTCTGGCGGTATGGTTGTTATAGAGTCAGGAACATGTGATATTCATGGAGATACTGAGTACGGACCTGTTGTAATGGATGGGAATATGCGTCTTGGTAATACCGCCGGGACCATTGCCAATCAGGCGGGTTGTGCTTGGCTGGATAATGCCAAGGGAACAGTAACAGGATCGGTAACTGTAAAAAATGGTCTTGGAATAGGCGTTAAAAGGGCGTCTACCGCAATTGTAGATGGAATTTCTAATATCATTTCTGAGAATAACGCATTCCCAGACCAACTTTAA

Genome Context

Tertiary structure

WPK37749.1
ESMFold structure
Source ESMFold
pLDDT 85.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 38322997 GenBank