Protein

View in Explore
Genbank accession
XKQ96225.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MTITVDDVKLLKSQRLTDEDDGGGRATGQAVVDREINNLFPDISRLDRTIGRINLRKAFAGISSNSAEPYLGAHAIVTRAPADPRVSVLLFNTGSQTDERRDARNAIESFVVPAVSASFELLGNQLQGQRAIACVQREEQRLPEIGEVYQLVFESRSQYVRITDVEARLEQFAHDYGNGNFVNFTRRRLDLSISAPLGATFPGGQVTPGGTTSPKSQVLSTQVADAARYYGISPLAEAVSRGALSLRVKSVYSQLVPSTTRENALVDQLAGYQRRLFAAAGPARTVNLNVANIGSGRSRTFLGTGCAPGSLSLSAGGGVFADDRKGGLRYISGSNWIASGTVDYESGAIEMAASGSGWSGTASATYQPAAAATGEAVTGEIPIELGNRGFVYTLSLSEAPPQPGTLVVSFLALGKWQEIRDQGNGELAGEGTGTVDFATGSVSITLSALPDVGSSLIYAYVGQNDAALTQRTGTSVQARARINRTLPHQGLLPGSYKATFKVGGVERTVLDSGNGSLSGTGGSGQINYADGKVSMELSATPDAGSGIVHTYQQGSVTDSPLAVTSDSTGMCIGTLPGAPLKAGSVRLSWITKRRQAAPTLGADMGTGALPIFESEITVDNSVTDDAAGGWAGRAGTINYETGEFSLKVAGNYVFKEYTYYTDTVDNFGMKKLRLVATDTTLLEGFGGTLNVRAQSRGVEYGEQTDSQTVAPVTLDLLPGVAEPILPGSLVFTWAGEVYVDRSGVLYKNINSSTNAGIAVGSVDYAGRTATLNTYGSGAAPTVTLLACLTTNAGFSVTSMTFRTPGAPLRSASLQVTAVRLDTAQIVTTTADANGKLNGAVIKGSVDIVTGIVRLRFTSNLEDTTGASDIPVIPLLLRYNAVVFTSLPLDATLLGLDPVRLPADGRVPVFREGDVMVVAHTAETTVPSPQAGGVLQLSRDQQAEIKVVDANAVELASAGYSVDLERGRVTWANPLVLQDAEGNPLTLPLVVRDRVEHMTLCTEVQVNGELGISSPLPWDLPAGETLASSALSWGDLQARLHHWFTQRTWDIGSPNWTDEPKGDGTTANYNSLAYPPLIANRGAIDAKWALVFNSSTSFSVVEEKLGVIANGTTTTDTAPINPETNTPYFTIRKEGWGSGWAAGNAVRFNTDSCLGPMWIVRTVLSGKGTVEDDEFHLQIRGDAD
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 124702,95150 Da
isoelectric point:5,05091
aromaticity:0,06932
hydropathy:-0,10068

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKQ96225.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 650 650 0,8634
Central domain 651 874 225 0,2233
C-terminal 875 1183 308 0,2542
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-650
Central
651-874
C-terminal
875-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Haddon
[NCBI] 		3381783 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKQ96225.1 [NCBI]
Genbank nucleotide accession
PQ571161 [NCBI]
CDS location
range 22921 -> 26472
strand -
CDS
ATGACGATCACCGTCGATGATGTAAAGCTGCTGAAATCCCAGCGCCTCACCGATGAGGACGACGGCGGCGGCCGTGCCACCGGGCAGGCCGTGGTGGATCGCGAGATCAACAACCTGTTTCCCGATATCTCGCGCCTGGACCGGACCATCGGCCGGATCAACCTGCGCAAGGCCTTCGCCGGCATCAGCTCGAACAGCGCCGAGCCGTACCTGGGCGCTCATGCCATCGTCACGCGGGCGCCGGCCGATCCGCGTGTCTCGGTGCTGCTGTTCAACACCGGCAGCCAGACCGATGAGCGCCGCGACGCGCGCAACGCCATCGAGTCCTTCGTGGTGCCGGCCGTGTCTGCCTCGTTCGAACTGCTGGGCAACCAGTTGCAGGGCCAGCGCGCCATCGCTTGCGTGCAGCGCGAAGAACAGCGGCTGCCCGAGATCGGCGAGGTCTATCAGCTGGTGTTCGAGTCGCGCTCGCAGTATGTCCGCATCACCGACGTCGAGGCGCGGCTGGAACAGTTCGCCCACGACTACGGCAACGGCAACTTCGTGAACTTCACCCGGCGCCGGCTGGACCTGTCGATCAGCGCGCCGCTGGGCGCGACCTTCCCCGGCGGCCAGGTGACGCCAGGCGGCACCACCAGCCCGAAAAGCCAGGTGCTCAGCACCCAGGTCGCCGATGCCGCGCGGTACTACGGCATCAGCCCCCTGGCCGAGGCTGTCAGCCGCGGCGCGCTGAGCCTGCGGGTCAAGTCGGTCTATTCCCAACTGGTGCCCAGTACCACCCGGGAAAACGCGCTGGTCGACCAACTGGCCGGCTACCAGCGGCGCCTGTTCGCTGCGGCCGGGCCGGCGCGGACGGTCAACCTGAATGTCGCGAACATAGGCAGCGGCAGGTCGCGGACGTTCCTCGGCACCGGCTGCGCGCCGGGTTCGCTGTCGCTGAGCGCCGGCGGCGGTGTGTTCGCCGACGACCGCAAGGGAGGCCTGCGCTACATCAGCGGTTCGAACTGGATTGCCAGCGGTACCGTCGACTACGAGAGCGGCGCAATCGAGATGGCGGCCTCCGGCAGCGGCTGGAGCGGGACAGCGAGCGCCACCTACCAGCCTGCCGCCGCGGCGACGGGCGAAGCGGTGACCGGGGAGATCCCTATCGAACTGGGCAACCGCGGCTTCGTCTACACCCTGTCGCTGTCCGAAGCGCCGCCCCAGCCGGGCACCCTGGTGGTCTCGTTCCTCGCCCTGGGCAAATGGCAGGAGATCCGCGACCAGGGCAACGGCGAATTGGCCGGGGAAGGCACCGGCACGGTGGACTTCGCGACCGGCTCGGTATCCATCACCCTGAGCGCGCTGCCGGACGTGGGGAGTTCGCTGATCTACGCCTACGTCGGGCAGAACGATGCGGCGCTGACCCAGCGCACCGGCACCAGCGTGCAGGCGCGCGCGCGGATCAACCGGACGTTGCCGCACCAGGGGCTGTTGCCCGGCTCCTACAAGGCGACGTTCAAGGTCGGCGGGGTAGAGCGCACCGTGCTCGATAGCGGCAACGGCTCGCTCAGCGGTACCGGTGGCAGCGGCCAGATCAACTATGCCGACGGCAAGGTCAGCATGGAATTGAGCGCCACCCCGGATGCCGGGAGTGGGATCGTGCATACCTACCAGCAGGGCAGCGTGACCGACAGCCCGCTGGCGGTGACCTCCGACAGCACCGGCATGTGCATCGGCACTCTCCCCGGGGCGCCGCTCAAGGCGGGCAGCGTGCGCCTATCGTGGATCACCAAGCGTCGCCAGGCGGCACCGACCCTCGGTGCTGACATGGGCACCGGGGCGCTGCCGATCTTCGAATCGGAGATCACCGTGGACAACTCGGTGACCGACGACGCCGCCGGCGGCTGGGCCGGGCGCGCCGGGACGATCAACTACGAGACCGGCGAATTCAGCCTGAAGGTGGCCGGCAACTACGTGTTCAAGGAGTACACCTACTACACCGACACGGTCGACAACTTCGGCATGAAGAAGCTGCGCCTGGTGGCCACCGATACCACCTTGCTGGAGGGTTTCGGCGGCACGCTGAACGTGCGTGCGCAGAGCCGCGGCGTCGAGTACGGCGAGCAGACCGATTCGCAGACCGTCGCGCCGGTGACCCTGGACCTGTTGCCCGGCGTTGCCGAGCCGATCCTGCCGGGCTCGCTGGTGTTCACCTGGGCCGGCGAGGTCTACGTCGATCGCTCCGGTGTGCTCTACAAGAACATCAACAGCAGCACCAACGCCGGCATCGCCGTCGGCTCGGTGGACTACGCCGGCCGTACCGCGACGCTGAACACCTATGGCTCGGGGGCGGCGCCGACGGTCACGCTGCTGGCCTGTCTGACCACCAACGCCGGCTTCAGCGTCACCAGCATGACCTTCCGCACGCCGGGGGCGCCGCTGCGTTCTGCGAGCCTGCAGGTGACGGCGGTTCGCCTGGATACCGCGCAGATCGTGACCACCACGGCGGACGCGAACGGTAAGCTCAATGGCGCGGTGATCAAGGGTAGCGTCGATATCGTGACCGGCATCGTCCGGCTGCGCTTCACCAGCAATCTGGAGGACACCACTGGGGCCAGCGATATCCCGGTGATTCCGCTGCTGCTGCGCTACAACGCGGTCGTCTTCACCTCGCTGCCGCTGGACGCCACCCTGCTGGGCCTGGACCCGGTGCGACTGCCGGCGGACGGGCGGGTGCCAGTGTTCCGCGAGGGCGACGTGATGGTGGTTGCTCATACCGCCGAGACCACGGTGCCGAGTCCTCAAGCCGGGGGCGTGCTGCAGCTCAGCCGCGACCAGCAGGCCGAGATCAAGGTGGTGGACGCCAACGCGGTGGAACTGGCCTCGGCGGGCTACAGCGTCGACCTGGAACGCGGCCGGGTGACATGGGCCAACCCGCTGGTCCTGCAGGATGCCGAGGGCAACCCGCTGACCCTGCCGCTGGTGGTGCGTGACCGGGTCGAGCACATGACCCTCTGCACCGAGGTCCAAGTGAACGGCGAGTTGGGAATCTCCTCGCCGCTGCCCTGGGATCTGCCGGCGGGCGAAACGCTGGCGTCCAGTGCGCTGAGCTGGGGCGACCTGCAGGCGCGGCTGCACCACTGGTTCACCCAGCGGACCTGGGATATCGGCTCGCCGAACTGGACCGACGAGCCCAAGGGCGACGGGACCACCGCCAACTACAACAGCCTCGCCTATCCGCCGCTGATCGCCAACCGCGGTGCGATCGATGCGAAGTGGGCGCTGGTGTTCAACTCCTCGACCAGTTTCAGCGTGGTGGAGGAGAAGCTGGGGGTGATCGCCAACGGCACTACCACCACCGACACGGCGCCGATCAACCCGGAGACGAACACGCCGTACTTCACCATCCGCAAGGAAGGCTGGGGCAGTGGCTGGGCGGCCGGCAACGCGGTGCGCTTCAACACCGACTCGTGCCTGGGGCCGATGTGGATCGTGCGGACGGTACTCAGCGGCAAGGGCACCGTCGAGGACGATGAATTCCACCTGCAGATCAGAGGAGACGCGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
872f00263b509b76fa1a707a485db4a581e84e4dfc03552e48cd154b8e4b1773
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Structural conservation and functional role of TfpY-like proteins in type IV pilus assembly Qaderi,I., Chan,I., Harvey,H. and Burrows,L.L. 2025 39817748 GenBank