Protein

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Genbank accession
YP_010767005.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANITKPIGLSNVWADGGTKIDPGAAKVNIGWVVQLPPYEYQNWIDNRQDRAIAHFSQHGVPEWDGATEYQGLLSYAQGSDGIIYKCIQTNVNKDPANPLNDAFWARAFEDYGSVAAVQAQLNAHITNYQSLSGIGNVAGARANLSVYSKVESDTRFAGLNGNSAQVFAVAVATQPEHAVRLGQVNSLLTQATEANLGVVRLATSGVTEAGTDDLRAITPLKAATVYLKKSGNLAGLGNTVTARNNLGLGDIATESQATFAKTANNLSDLASVVSARSNLGLTSTATQPETYFLRTALNLADLTNTVTARANLGLTSLANTPAADVLHRADNLQGLPNVALARSNLGLSDSVIYPSNTWLVRVNNLSDLPNAQAARNNLGLGNLSTRNVFGVPGDLDFTISKALGGYTNLPNGLIMQWGQGPALGDDQGTTVGLFVAMNVVSVQVTGIGAATNGIGPGFLTQAWTTTSFQVYNNYNSGPWRPFSWLAIGYV
Physico‐chemical
properties
protein length:491 AA
molecular weight: 51755,15800 Da
isoelectric point:5,75514
aromaticity:0,07739
hydropathy:-0,06741

Domains

Domains [InterPro]
DC_0043
STR
1–305
DC_0043 DC_0362
G3DSA:2.60.40.3940
RBD
400–490
G3DSA:2.60.40.3940
IPR054075
RBD
410–490
IPR054075
YP_010767005.1
1 491
Architecture
STR
RBD
STR 1-305 | RBD 323-490 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage psageK4e
[NCBI] 		2875723 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus psagek4e
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010767005.1 [NCBI]
Genbank nucleotide accession
NC_073682.1 [NCBI]
CDS location
range 55295 -> 56770
strand +
CDS
ATGGCAAACATTACAAAACCAATTGGCCTGAGCAATGTTTGGGCTGATGGTGGTACGAAGATTGATCCGGGTGCCGCTAAGGTTAACATCGGGTGGGTTGTTCAACTTCCACCATACGAATATCAAAACTGGATTGACAACCGTCAAGATCGTGCCATTGCTCACTTTAGTCAGCATGGTGTTCCAGAATGGGATGGTGCTACAGAGTACCAAGGACTTCTGAGCTACGCTCAAGGCTCCGATGGTATCATCTACAAGTGCATCCAAACCAACGTAAACAAAGACCCAGCCAACCCTTTGAACGATGCCTTCTGGGCACGTGCGTTTGAAGACTATGGTTCTGTTGCTGCTGTACAGGCACAGTTGAACGCTCACATCACAAACTACCAATCTCTTTCTGGAATTGGTAACGTTGCTGGTGCCCGAGCTAACTTGTCTGTATACTCCAAAGTTGAAAGCGACACACGCTTCGCTGGCTTGAACGGTAACTCTGCTCAAGTGTTTGCTGTTGCTGTTGCCACACAACCAGAACATGCTGTACGTCTTGGGCAAGTTAATAGCTTGCTGACACAGGCTACAGAAGCAAACCTTGGTGTTGTTCGTCTTGCAACCAGCGGTGTAACAGAAGCTGGCACAGACGACCTGAGAGCCATCACCCCATTGAAGGCTGCTACAGTCTACCTCAAGAAGAGCGGAAACCTTGCTGGACTTGGAAACACTGTTACAGCTCGAAACAACCTTGGGCTTGGTGATATCGCAACTGAGAGTCAAGCGACGTTTGCTAAGACTGCAAACAACCTGAGCGACCTTGCAAGTGTTGTATCGGCTCGTAGTAACCTTGGACTAACATCCACTGCTACTCAGCCTGAAACATACTTCCTGAGAACTGCTCTAAACCTTGCAGACCTCACAAACACTGTTACTGCAAGAGCCAACCTTGGGCTTACATCTTTGGCTAACACTCCTGCTGCTGACGTTCTCCACAGAGCTGACAACTTGCAGGGGCTTCCTAACGTCGCTCTCGCACGTTCCAACCTTGGACTGTCTGACTCTGTTATCTACCCAAGCAACACTTGGCTGGTAAGAGTTAACAACCTGTCCGACCTGCCTAACGCACAAGCTGCACGTAACAACTTGGGACTTGGTAACTTGTCTACACGTAACGTGTTCGGTGTACCGGGTGATCTTGACTTCACAATCTCCAAAGCTCTTGGTGGATATACAAACCTACCAAACGGTTTGATTATGCAGTGGGGCCAAGGCCCAGCTCTGGGAGACGACCAAGGAACAACAGTTGGATTGTTTGTGGCGATGAACGTTGTATCTGTGCAAGTTACAGGTATCGGTGCTGCAACTAACGGTATCGGGCCGGGGTTCTTGACTCAAGCTTGGACAACCACAAGCTTCCAAGTTTACAACAACTACAACAGTGGGCCGTGGCGTCCATTCAGTTGGCTAGCAATCGGGTACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36c18d60a99a2f2ddead2ecec479b804adf03599f384c0efa934efc1c5a1a8b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7562
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50