Protein
View in Explore- Genbank accession
- WDR22058.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTFTFTSPTSP
- Protein sequence
-
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQLSKYAVDKAATDASINSINESIGNINTALGGINTTLGTKAAKGANNDITELNALTKAITIAQGGTGATDVAGARKNLGLTAFEMTAVDTRMFSPDRKKILRISDSMWGAYNPETGQEIALGISSGGTGALNPKNARKNLNIPVGANAEIIPANSNVLDYIAIAGQSGYYSSGDLVTHIPPVKEGWWTYNFHCHGVDINGAAQYGVLKAVGLSGSSWINVLDGTGNWKGWQEQFNLQSTVPVTNGGTGATTAAGAITKLGIPNIAEWTPANGVVRWIVNTLSEPTSTSTILRGGLLESSHNIAGVQRVITSLVPEYKWGEPDTVANLNVALADAQGHIIRYGGYKFSSGGVASFNTLRALSFDGIILDRGGDPTFSNRIVLETVKGAEGATLAGSMANFVDGTSRVVVNALSVSNNRKTVLYPSGGVICKPGLLGDPQLYSYSIDYSGGAAQLWIDSSNFGNIQTAPVSDKLLKKDITYRTDNEVALKQVMQWKIADFRYKKRGMLPESEMKTGWIANDLVTISPECVKGVGLTKGFDENNPKGAYELDTVAIMAKMSQAIQAQQKEIEELKELVNQLLTK
- Physico‐chemical
properties -
protein length: 625 AA molecular weight: 66196,16220 Da isoelectric point: 6,97792 aromaticity: 0,07040 hydropathy: -0,10256
Domains
Domain architecture
WDR22058.1
1
625 aa
CHP 513–619 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
WDR22058.1
1
625 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 142 | 142 | 0,9492 |
| Central domain | 143 | 341 | 200 | 0,0773 |
| C-terminal | 342 | 625 | 283 | 0,8451 |
Note: Constraints were applied during segmentation.
Fixed 7 C-terminal predictions appearing before Central domain
Fixed 7 C-terminal predictions appearing before Central domain
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Phage
Salmonella phage vB_SenS_UTK0008
[NCBI]
· taxon 3028907
Host
No host information
Coding sequence (CDS)
Genbank protein accession
WDR22058.1
[NCBI]
Genbank nucleotide accession
OQ359888.1
[NCBI]
CDS location
range 82140 -> 84017
strand -
strand -
CDS
ATGTCACGTAATTTAATGCCAAAAAGTGGGGCTATGGCCCCCTATGTTGTAGTTAATAGAGACGCCGCAGTTGCCGGCGTTTTCTCTGTTGATGGAGAAGCTGGTGCTGTTGTACTAACTTCTAAATACCTTCAATTGTCTAAATATGCTGTTGATAAGGCTGCTACTGATGCATCTATCAATAGTATTAATGAATCTATTGGTAATATTAACACTGCTCTTGGAGGAATTAATACTACTCTAGGTACTAAAGCAGCTAAAGGTGCTAATAATGATATTACTGAACTAAATGCACTTACAAAAGCTATAACTATTGCTCAGGGTGGTACTGGCGCTACTGATGTTGCTGGAGCTAGAAAGAATCTAGGTCTTACGGCTTTTGAAATGACTGCTGTAGATACTAGAATGTTTAGTCCAGACAGGAAAAAGATACTTAGAATATCTGATTCCATGTGGGGGGCCTATAACCCTGAAACAGGCCAAGAAATTGCACTAGGGATTAGTAGTGGAGGTACTGGTGCTTTAAATCCTAAGAACGCAAGGAAAAATCTAAATATCCCTGTTGGGGCTAATGCGGAGATAATTCCGGCAAATAGTAATGTCTTAGACTATATTGCTATTGCAGGTCAAAGCGGATACTACTCTTCCGGGGATTTAGTTACACATATACCTCCTGTTAAAGAAGGTTGGTGGACGTATAATTTCCACTGTCATGGGGTAGATATTAACGGTGCTGCACAGTATGGTGTTTTAAAGGCTGTTGGATTATCAGGTAGTTCATGGATTAACGTTCTAGATGGTACAGGTAACTGGAAAGGTTGGCAAGAACAGTTTAATCTGCAATCAACTGTCCCAGTAACTAATGGTGGTACTGGAGCAACTACGGCTGCAGGTGCTATAACTAAATTAGGAATTCCTAATATTGCAGAATGGACCCCTGCTAATGGGGTAGTACGTTGGATAGTTAATACTCTTTCTGAGCCTACAAGTACAAGTACAATATTAAGAGGGGGATTACTAGAAAGCTCTCATAATATTGCTGGGGTACAGCGTGTTATTACTAGTTTAGTTCCTGAGTATAAGTGGGGTGAACCTGATACAGTTGCTAATCTCAACGTTGCGTTAGCTGATGCACAAGGTCATATTATTCGCTATGGCGGGTATAAATTCTCTTCTGGTGGGGTAGCTTCTTTTAACACTCTGAGAGCTTTATCATTTGATGGTATTATACTAGATAGAGGTGGAGATCCTACTTTCTCAAATAGAATAGTTCTTGAGACAGTAAAAGGAGCTGAAGGCGCTACATTAGCGGGGAGTATGGCTAACTTCGTAGATGGGACATCACGAGTAGTAGTTAACGCTTTGAGTGTCTCTAATAATAGAAAGACTGTTCTATATCCTAGCGGTGGTGTTATATGTAAGCCTGGACTTCTAGGAGATCCACAACTTTATAGTTATAGCATTGACTATTCTGGAGGAGCTGCACAGCTGTGGATTGATAGTTCTAACTTTGGTAATATACAAACAGCACCAGTATCTGATAAGTTACTAAAGAAAGACATAACTTATCGTACGGATAATGAGGTTGCCCTTAAACAAGTAATGCAGTGGAAGATAGCTGACTTTAGGTACAAGAAGAGAGGTATGCTACCTGAGTCGGAGATGAAAACTGGTTGGATTGCAAACGATCTTGTAACTATAAGTCCAGAGTGTGTCAAAGGCGTAGGATTAACCAAAGGTTTTGATGAAAATAACCCTAAAGGAGCTTATGAACTAGATACGGTTGCAATAATGGCTAAAATGTCTCAGGCTATTCAAGCACAGCAAAAAGAGATAGAAGAGTTGAAAGAACTTGTCAATCAACTACTCACTAAGTAA
Genome Context
Tertiary structure
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater | Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. | — | — | GenBank |