Protein

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Genbank accession
AKJ71712.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSNLLRPSINTRGGADPALWEKPVNQASKWLCARSGSTPSGKPPMRLLQEGGSITVENNSSQEFLISVFLGDGGSANLGGASGNSTVQISRAGSTITVKCQAQKGTNGTQTFTTSVGADRWSNIYLKCNKYGAFSDQVRVTAMCDFNETKQLIATGSFLGETFVTNGKTFTANSLSGWAWIASTTGGFWGMFGQSSVPITDVKYREAFINNATWDLDINTSQHDWQRPADLKTMRAWIIQAGGGPGGPGGNGGDGGDGRQGDNVQPRGCTSGSSGASGGPGGKGGPGGQNGSPGQNGSAGSSGGFGGMASFSPNTGNPEDYTSCSPGSAGSGGSGGSGGAGGLGGRGRVKQVAFTQAVVPCRVGVRGSTGAPGTRGTDGSDAGTFSSPSSGGPGGDGSPGGPGGATYFGNEDTIDATDISTPTIKFGATEFEHGCGGPGQDGGVVLYLIW
Physico‐chemical
properties
protein length:450 AA
molecular weight: 45042,60020 Da
isoelectric point:6,17325
aromaticity:0,07556
hydropathy:-0,42733

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Tsukamurella phage TIN2
[NCBI] 		1636545 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Tsukamurella inchonensis
[NCBI] 		42777 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Tsukamurellaceae > Tsukamurella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKJ71712.1 [NCBI]
Genbank nucleotide accession
KR011062 [NCBI]
CDS location
range 28415 -> 29767
strand +
CDS
ATGTCAAACCTACTGAGGCCCTCGATTAACACTCGAGGTGGCGCAGACCCGGCGCTATGGGAGAAGCCTGTCAACCAGGCAAGTAAGTGGCTGTGCGCCAGGTCAGGAAGTACTCCATCCGGTAAGCCGCCTATGCGCTTGCTCCAGGAGGGTGGGTCCATCACCGTCGAGAATAACAGCTCACAGGAGTTCTTGATCTCGGTCTTCCTTGGTGATGGCGGATCGGCCAACCTGGGCGGCGCATCCGGCAATAGCACGGTTCAGATCAGTCGTGCCGGGTCAACTATTACTGTTAAGTGTCAAGCACAGAAGGGTACTAACGGAACTCAGACTTTCACCACATCTGTCGGAGCAGATAGGTGGTCCAATATATATCTCAAGTGCAACAAATACGGCGCGTTCAGCGATCAGGTCCGAGTCACTGCCATGTGTGACTTCAACGAGACTAAGCAATTGATCGCAACAGGCTCGTTCTTGGGTGAAACCTTTGTCACGAACGGCAAAACTTTCACAGCCAACTCGCTTTCGGGGTGGGCCTGGATCGCCTCCACCACTGGTGGATTCTGGGGAATGTTCGGACAGTCGTCTGTTCCGATTACCGATGTTAAGTATCGAGAGGCGTTTATCAACAACGCCACTTGGGATCTCGACATCAACACCAGCCAGCACGATTGGCAGCGTCCTGCGGACCTCAAGACTATGCGCGCTTGGATCATTCAAGCTGGCGGTGGCCCAGGAGGTCCAGGTGGTAATGGTGGTGACGGCGGCGACGGCCGACAGGGTGATAACGTTCAGCCGCGAGGTTGTACTTCCGGCTCTAGCGGCGCCTCGGGTGGCCCAGGCGGCAAGGGTGGCCCAGGTGGACAGAATGGCTCTCCAGGGCAGAACGGGTCAGCTGGCTCAAGCGGTGGGTTTGGCGGCATGGCCTCATTCAGTCCTAACACCGGCAACCCTGAAGATTACACATCTTGTAGCCCGGGCTCTGCCGGTTCCGGTGGTTCGGGTGGCTCCGGTGGCGCAGGCGGTCTAGGTGGGCGAGGTAGGGTGAAGCAAGTTGCATTCACGCAGGCTGTTGTGCCATGTCGAGTAGGCGTTAGGGGGTCGACAGGTGCGCCCGGTACGCGCGGAACCGACGGCAGCGACGCTGGTACGTTCTCAAGCCCGTCCTCTGGTGGGCCAGGTGGGGACGGCAGTCCCGGCGGTCCCGGTGGAGCTACCTACTTTGGCAACGAGGATACAATTGACGCTACCGACATCTCGACGCCTACAATTAAGTTCGGAGCCACTGAGTTTGAGCACGGCTGTGGTGGCCCAGGACAGGACGGCGGCGTCGTCCTGTATCTCATCTGGTAA

Tertiary structure

PDB ID
e3c9ba1ab1824fc717edcd6d0aa45b29027a9319fe6c79cdf88c5b9cbce1301b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three of a Kind: Genetically Similar Tsukamurella Phages TIN2, TIN3, and TIN4 Dyson,Z.A., Tucci,J., Seviour,R.J. and Petrovski,S. 2015 26187971 GenBank