Phage RBP Database

Genbank accession

CAH1068052.1 [GenBank]

Protein name

variable tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,94

Seq2Symm

C3 confidence 0,914

C3	0,914
C1	0,543
I	0,044

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

METPLNNTYKHIADAAQYISFNPTDTSFPATVVDVQAALALTSPTTYATATTAGVVKIATKDEVLAGVDNTKMVTPFTLNERMKYPDATTTVKGLVTLATNAEAQAGAITSNKAINPASLKYTLDWWWDNKLASESAQGVIKLSTQQAAQAGVDDSTAMTPLKVKQAIAAATAQIPQPVQATETAPGIVQLATIGQAQQGTLRDGYAISPYTLQRITGSLTTRGLVQAATLAQANTGTDDTLYISAKGFKTYNATTTNYGTVKLTDTPGTTGAGVVLSSNAKVLSTVSTGTQTVTGIVNFTETLQLQGQPVANQKFVKDSIPIGVMMEWFGDSAPPGGMWALCDGGAESKAARPELFAVIGYKFGGSGDTFYRPDMRGLYARGAGRGKDIIANTGYDEFNKPLLGNGVDGGVVGQVQKQQIREHKHIVSWGENRRETPNFPFGGTQLSKYWGTAGKEDHDNGWMFSNDGTEFEPASVRTEYSTVNPKELIGTETRPWSMSVNYIIKVA

Physico‐chemical properties

protein length:	508 AA
molecular weight:	54089,03980 Da
isoelectric point:	5,93049
aromaticity:	0,08071
hydropathy:	-0,27087

Domain architecture

CAH1068052.1

1 508 aa

ATT 311–379 · STR 380–507 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053 IPR044916

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083 IPR027448

IPR027448
RBD

IPR027448

CAH1068052.1

1508 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0176
STR

DC_0176

CAH1068052.1

1508 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	311	377	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	317	507	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	324	379	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	378	500	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	413	507	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits
IPR027448	RBD	DC_0877	425	507	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Proteins with similar domain architecture

Phage

Acinetobacter phage MD-2021a [NCBI] · taxon 2899278

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

CAH1068052.1 [NCBI]

Genbank nucleotide accession

CAKLQD020000001.1 [NCBI]

CDS location

range 30505 -> 32031
strand -

CDS

ATGGAGACACCACTTAATAATACATACAAACACATTGCAGATGCAGCACAATATATCTCATTCAATCCAACAGATACAAGTTTTCCTGCAACTGTAGTAGATGTTCAAGCTGCATTGGCTCTTACTTCTCCTACTACATACGCCACTGCCACTACCGCAGGTGTCGTCAAAATTGCTACCAAAGATGAAGTTTTAGCAGGGGTTGATAACACAAAAATGGTGACACCATTCACTCTAAATGAGAGAATGAAATATCCTGATGCCACTACAACAGTTAAAGGGCTTGTAACTTTAGCTACTAATGCAGAGGCTCAAGCCGGAGCCATAACTTCAAATAAAGCTATCAATCCAGCAAGTTTGAAATACACACTTGATTGGTGGTGGGACAATAAATTAGCATCTGAATCTGCACAAGGTGTTATTAAATTATCTACACAACAAGCTGCACAAGCCGGAGTAGATGATTCTACCGCAATGACACCATTAAAGGTCAAACAAGCCATTGCAGCTGCCACAGCACAAATTCCGCAACCTGTACAAGCTACTGAGACTGCACCGGGTATAGTTCAACTTGCAACAATTGGCCAAGCACAACAAGGTACTTTAAGAGATGGATATGCAATCTCGCCATATACTCTTCAACGTATTACAGGAAGTCTTACAACACGAGGATTAGTCCAAGCTGCAACTTTAGCACAAGCTAACACAGGGACGGATGACACCTTATACATTTCTGCTAAAGGATTCAAAACATATAATGCTACCACTACAAATTATGGTACAGTTAAATTAACCGATACACCTGGGACCACCGGTGCTGGTGTCGTGTTAAGTTCTAATGCTAAAGTATTAAGCACTGTATCTACCGGTACACAAACTGTCACAGGCATTGTTAATTTTACTGAAACACTTCAACTTCAAGGACAACCAGTAGCCAATCAAAAATTTGTTAAAGATTCTATTCCGATTGGCGTCATGATGGAATGGTTCGGTGATTCAGCGCCTCCTGGAGGTATGTGGGCGTTATGCGATGGTGGAGCCGAATCAAAGGCTGCACGCCCAGAGCTTTTTGCGGTTATTGGCTATAAATTCGGCGGTTCTGGTGATACATTCTATCGCCCAGATATGAGAGGTCTTTATGCTCGTGGTGCTGGGCGTGGTAAAGACATCATTGCAAACACCGGATATGATGAGTTCAATAAACCTCTATTAGGTAATGGTGTAGATGGCGGCGTTGTTGGACAAGTTCAAAAGCAACAAATTCGTGAACATAAGCACATTGTTTCTTGGGGCGAAAATCGTAGAGAGACGCCTAACTTCCCATTTGGTGGCACACAGTTAAGTAAATATTGGGGGACCGCTGGTAAGGAAGATCATGATAATGGTTGGATGTTCTCTAACGATGGAACAGAATTTGAACCTGCATCAGTGCGGACCGAATATTCTACTGTCAACCCTAAAGAGTTAATTGGAACAGAGACACGCCCATGGAGCATGTCAGTAAACTATATTATTAAGGTGGCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)