Protein

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Genbank accession
XXQ04430.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MQSTNRPAKFLVPFAQNDSARVEIPATTADATRFSQSLGSPPLTGMPPEAGGVPPQLEDFNGAMNQIARGVWWALGGGRFAYDSDWANNGLIGGYARGAVVPAALGAGSVGLGEWYNNTEGNTADPDAVGTGWVPGYNYGTTALVNQTGGTITLAPAQAAKRKITITGTLTSNLVIVVPNWIYDWNFYNATSGAFTVTVKNAATPGVLVPQNAQVTPLHSDSANVTAFSPNIAPANAATQAAQFSQTTGRLLNVQIFAANATYTPTAGAVTYEAEVFGGGGGGGGTPSITTNQVSAGAGGGAGGYAYARGSVADAAGSAIVVGAGGAGGPGATGSAGGTSSFRGLAATGGQGGTGGTANPSGTSGPTGLGAGGLGTGGAINAAGGFGMYALYGPFPLGGSGGASRLGSGAIATSASNNGAAAASPGAGGSGSCTVGPAASATGGAGAAGRVVIREYS
Physico‐chemical
properties
protein length:457 AA
molecular weight: 43926,67840 Da
isoelectric point:5,83500
aromaticity:0,07659
hydropathy:0,03370

Domains

Domains [InterPro]
DC_1179
STR
1–454
DC_1179
IPR049304
STR
260–454
IPR049304
XXQ04430.1
1 457
Architecture
STR
STR 1-454 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-28
[NCBI] 		3436196 Viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXQ04430.1 [NCBI]
Genbank nucleotide accession
PV754127.1 [NCBI]
CDS location
range 38696 -> 40069
strand +
CDS
ATGCAATCGACTAATCGCCCGGCTAAGTTCCTGGTGCCCTTCGCCCAGAATGACAGCGCGCGCGTCGAGATCCCGGCCACGACCGCCGATGCGACGCGCTTCTCCCAGTCGCTAGGCTCTCCACCGCTGACTGGCATGCCACCCGAAGCCGGTGGCGTCCCGCCGCAGCTCGAAGACTTCAACGGTGCGATGAACCAGATCGCTCGCGGCGTCTGGTGGGCGCTCGGCGGTGGTCGGTTTGCCTACGATAGCGACTGGGCGAACAACGGCCTGATCGGCGGCTATGCCCGCGGCGCCGTCGTGCCGGCTGCACTAGGTGCTGGCTCTGTTGGCCTAGGTGAGTGGTACAACAACACCGAAGGCAACACTGCCGATCCGGACGCGGTCGGCACAGGTTGGGTGCCTGGCTACAACTACGGCACCACCGCACTCGTGAACCAGACCGGCGGCACGATCACCCTGGCGCCAGCCCAGGCGGCCAAGCGCAAGATCACGATCACCGGTACGCTGACGTCGAATCTGGTGATCGTGGTGCCAAACTGGATCTACGACTGGAACTTCTACAACGCCACCAGTGGCGCGTTCACCGTGACGGTGAAGAATGCCGCTACGCCTGGCGTACTGGTGCCGCAGAACGCGCAGGTCACGCCGCTGCACTCGGATAGCGCCAACGTCACCGCGTTCAGCCCGAACATCGCCCCGGCTAATGCCGCCACGCAGGCTGCGCAATTCAGTCAGACCACCGGCCGTCTGCTGAACGTGCAGATCTTCGCGGCCAACGCAACCTATACGCCAACCGCGGGTGCAGTCACCTACGAAGCTGAAGTGTTCGGCGGTGGCGGTGGCGGTGGCGGTACGCCCAGTATCACCACCAACCAGGTCAGTGCTGGTGCTGGTGGCGGTGCTGGTGGCTACGCGTACGCGCGCGGGTCCGTTGCGGACGCCGCCGGCAGTGCGATCGTCGTCGGAGCTGGCGGCGCTGGCGGTCCGGGCGCGACGGGTAGCGCAGGGGGCACGTCCTCGTTCCGCGGTTTGGCCGCGACAGGTGGTCAGGGTGGCACCGGCGGCACCGCGAACCCGAGCGGCACCTCGGGCCCTACCGGCCTCGGTGCCGGCGGACTCGGCACGGGCGGCGCGATCAATGCTGCGGGCGGATTCGGCATGTACGCGCTCTACGGGCCGTTCCCGCTGGGCGGCTCTGGTGGCGCGTCTCGCCTAGGCTCCGGTGCAATAGCGACGTCGGCGTCGAACAATGGCGCAGCGGCCGCATCGCCAGGCGCAGGCGGGTCGGGCTCGTGCACGGTAGGTCCGGCGGCGTCCGCTACCGGCGGTGCCGGAGCTGCTGGGCGGGTCGTCATCCGCGAATACAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2307884ffdeb4a55342e04def50d5e0ccb5edc66bc38348d7a271e503e8b0dcc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50