Phage RBP Database

Genbank accession

XXQ04430.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,98

Protein sequence

MQSTNRPAKFLVPFAQNDSARVEIPATTADATRFSQSLGSPPLTGMPPEAGGVPPQLEDFNGAMNQIARGVWWALGGGRFAYDSDWANNGLIGGYARGAVVPAALGAGSVGLGEWYNNTEGNTADPDAVGTGWVPGYNYGTTALVNQTGGTITLAPAQAAKRKITITGTLTSNLVIVVPNWIYDWNFYNATSGAFTVTVKNAATPGVLVPQNAQVTPLHSDSANVTAFSPNIAPANAATQAAQFSQTTGRLLNVQIFAANATYTPTAGAVTYEAEVFGGGGGGGGTPSITTNQVSAGAGGGAGGYAYARGSVADAAGSAIVVGAGGAGGPGATGSAGGTSSFRGLAATGGQGGTGGTANPSGTSGPTGLGAGGLGTGGAINAAGGFGMYALYGPFPLGGSGGASRLGSGAIATSASNNGAAAASPGAGGSGSCTVGPAASATGGAGAAGRVVIREYS

Physico‐chemical properties

protein length:	457 AA
molecular weight:	43926,67840 Da
isoelectric point:	5,83500
aromaticity:	0,07659
hydropathy:	0,03370

Domain architecture

XXQ04430.1

1 457 aa

STR 260–454 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR049304
STR

IPR049304

XXQ04430.1

1457 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1179
STR

DC_1179

XXQ04430.1

1457 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR049304	STR	DC_0631	260	454	InterPro cluster	Glycine-rich domain	C-terminal	Low	Positional only	225 proteins / 228 hits

Proteins with similar domain architecture

Phage

Xanthomonas phage PhiXhv-28 [NCBI] · taxon 3436196

Viruses

Host

Xanthomonas hortorum pv. vitians [NCBI] · taxon 83224

Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xanthomonas Xanthomonas hortorum

Genbank protein accession

XXQ04430.1 [NCBI]

Genbank nucleotide accession

PV754127.1 [NCBI]

CDS location

range 38696 -> 40069
strand +

CDS

ATGCAATCGACTAATCGCCCGGCTAAGTTCCTGGTGCCCTTCGCCCAGAATGACAGCGCGCGCGTCGAGATCCCGGCCACGACCGCCGATGCGACGCGCTTCTCCCAGTCGCTAGGCTCTCCACCGCTGACTGGCATGCCACCCGAAGCCGGTGGCGTCCCGCCGCAGCTCGAAGACTTCAACGGTGCGATGAACCAGATCGCTCGCGGCGTCTGGTGGGCGCTCGGCGGTGGTCGGTTTGCCTACGATAGCGACTGGGCGAACAACGGCCTGATCGGCGGCTATGCCCGCGGCGCCGTCGTGCCGGCTGCACTAGGTGCTGGCTCTGTTGGCCTAGGTGAGTGGTACAACAACACCGAAGGCAACACTGCCGATCCGGACGCGGTCGGCACAGGTTGGGTGCCTGGCTACAACTACGGCACCACCGCACTCGTGAACCAGACCGGCGGCACGATCACCCTGGCGCCAGCCCAGGCGGCCAAGCGCAAGATCACGATCACCGGTACGCTGACGTCGAATCTGGTGATCGTGGTGCCAAACTGGATCTACGACTGGAACTTCTACAACGCCACCAGTGGCGCGTTCACCGTGACGGTGAAGAATGCCGCTACGCCTGGCGTACTGGTGCCGCAGAACGCGCAGGTCACGCCGCTGCACTCGGATAGCGCCAACGTCACCGCGTTCAGCCCGAACATCGCCCCGGCTAATGCCGCCACGCAGGCTGCGCAATTCAGTCAGACCACCGGCCGTCTGCTGAACGTGCAGATCTTCGCGGCCAACGCAACCTATACGCCAACCGCGGGTGCAGTCACCTACGAAGCTGAAGTGTTCGGCGGTGGCGGTGGCGGTGGCGGTACGCCCAGTATCACCACCAACCAGGTCAGTGCTGGTGCTGGTGGCGGTGCTGGTGGCTACGCGTACGCGCGCGGGTCCGTTGCGGACGCCGCCGGCAGTGCGATCGTCGTCGGAGCTGGCGGCGCTGGCGGTCCGGGCGCGACGGGTAGCGCAGGGGGCACGTCCTCGTTCCGCGGTTTGGCCGCGACAGGTGGTCAGGGTGGCACCGGCGGCACCGCGAACCCGAGCGGCACCTCGGGCCCTACCGGCCTCGGTGCCGGCGGACTCGGCACGGGCGGCGCGATCAATGCTGCGGGCGGATTCGGCATGTACGCGCTCTACGGGCCGTTCCCGCTGGGCGGCTCTGGTGGCGCGTCTCGCCTAGGCTCCGGTGCAATAGCGACGTCGGCGTCGAACAATGGCGCAGCGGCCGCATCGCCAGGCGCAGGCGGGTCGGGCTCGTGCACGGTAGGTCCGGCGGCGTCCGCTACCGGCGGTGCCGGAGCTGCTGGGCGGGTCGTCATCCGCGAATACAGCTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)