Protein

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Genbank accession
YP_007006974.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSDQVEIPDIDDLPDMQEAAEFTPAVKLLTTETPVLGYDGTKINPANWQAKALADRTQWLRNQILSVSTRLVLSVNGKTGNVVVTYNDVGADAAGTADALMTAHLTALDPHSQYFDETRGDTRYVQRSLANQSNGWLQLDAAGKIPAAMLQTLASRYVVVANQAARLALASSANLTICAQADIDQLFYLNGGANPAVAANWVAGQSATVSGVSSVFGRTGAVTAQNGDYDADKITETATRKFATPAEKTAWNAKQAALVSGTNIRSLFGNSLLGSGNLAPTPAQMGAAAAVHTHTTADITDYTQKTQQLITASLEAGTGVTLGYNPVSGKTIISAVGGSGGGSGYVVVDRAGATAGQNHTFSVSTQNAFDLAAFALKEEAGAAGVTFLVDEFNASSSASYNATSAIVFDGTLRAYTGGVSNLLPSGSIFAAQIPGDGRSLSVSDATIIVATPDMTANNSPAGYAASASSSYSAAYAPWYAFSVSDPGFWNSLTKPTPENPEWLAISLPSAIKISGYQIANRASSVISSPRAWKFQGSNDGSAWHDLHSVENDVRNDAGVIREFRFNSAVAYSKYRLLITQSNPDANYVVIRYLRILQFNGMLLNSAQNQWYSSNNGVIESVGAEQFGMGFSSSGQIGEADLSLISPARVCAASQLSVKTLYAPHTQIAISRDLMSAASWSQINSATLPATQTGSGKVRIAVTRDLVSWHVLQSGAWVDVGALSVDTAGATKLIADGMTPAEFGAITAAQWTALFSSNNGVPDSLAFAFALDITDPSVDVAAIERLLLNVNNTSSWRLQNPSDVEIRWRADNVSFKTVTAGNYKLAYQIP
Physico‐chemical
properties
protein length:829 AA
molecular weight: 87144,93820 Da
isoelectric point:5,07574
aromaticity:0,08203
hydropathy:-0,02967

Domains

Domains [InterPro]
DC_1519
ATT
23–200
DC_1519 IPR000421
G3DSA:2.60.120.260
STR
450–595
G3DSA:2.60.120.260 DC_1768
G3DSA:2.60.120.260
STR
453–598
G3DSA:2.60.120.260
IPR000421
RBD
465–588
IPR000421
IPR008979
STR
465–593
IPR008979
YP_007006974.1
1 829
Architecture
ATT
STR
RBD
ATT 23-200 | STR 450-598 | RBD 599-829
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007006974.1
1 829
Domain Start End Length (AA) Confidence
N-terminal 1 361 361 0,9563
Central domain 362 596 236 0,5255
C-terminal 597 829 232 0,2681
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-361
Central
362-596
C-terminal
597-829

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage ZF40
[NCBI] 		1127516 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007006974.1 [NCBI]
Genbank nucleotide accession
NC_019522 [NCBI]
CDS location
range 42843 -> 45332
strand +
CDS
ATGTCAGACCAGGTTGAAATCCCAGATATCGATGATCTGCCCGACATGCAGGAGGCTGCAGAATTTACCCCTGCGGTCAAACTACTGACGACAGAAACACCCGTCCTTGGTTATGACGGCACAAAAATTAATCCCGCGAATTGGCAGGCAAAGGCGCTGGCTGACCGGACTCAGTGGTTACGCAACCAGATACTGAGCGTATCCACGCGGCTAGTATTGTCAGTGAACGGTAAAACGGGAAATGTCGTTGTCACGTATAACGATGTCGGTGCTGACGCAGCGGGGACAGCTGACGCGCTGATGACTGCGCATTTAACAGCTCTCGATCCTCACTCGCAGTATTTTGACGAAACACGCGGTGATACGCGCTATGTTCAGCGGTCGCTGGCGAATCAGTCCAACGGCTGGCTGCAACTGGATGCTGCGGGGAAAATCCCCGCAGCGATGTTGCAAACGCTGGCGTCGCGTTATGTCGTCGTAGCAAATCAAGCGGCGCGGCTTGCACTGGCATCATCTGCAAACCTGACTATCTGCGCTCAGGCCGACATTGACCAGTTGTTCTATTTGAACGGCGGTGCGAATCCTGCCGTGGCCGCAAATTGGGTTGCAGGGCAATCCGCTACGGTTTCCGGCGTATCGTCCGTGTTCGGACGTACTGGCGCGGTTACGGCGCAGAACGGTGATTATGACGCGGACAAAATCACTGAGACGGCAACGCGTAAATTTGCAACGCCAGCAGAAAAAACGGCGTGGAATGCGAAACAGGCTGCGTTAGTTTCCGGCACCAACATCCGATCGCTTTTCGGTAACTCTCTGCTGGGCTCAGGTAATTTAGCGCCAACGCCAGCACAAATGGGGGCAGCGGCGGCGGTTCACACGCACACAACGGCAGATATCACAGACTACACACAGAAAACCCAGCAACTCATTACCGCCTCGCTGGAGGCCGGAACAGGCGTAACGTTGGGTTACAACCCTGTGAGCGGGAAAACGATCATCAGTGCTGTCGGAGGTTCTGGCGGTGGATCGGGATATGTCGTTGTTGACAGAGCTGGAGCGACCGCAGGACAAAATCATACATTCAGTGTCAGCACACAAAACGCGTTTGACCTGGCTGCGTTTGCGCTGAAAGAAGAAGCGGGTGCGGCGGGTGTAACATTTTTGGTTGATGAGTTCAACGCGTCTAGCAGTGCTAGTTACAACGCAACCAGCGCTATTGTTTTTGATGGTACGTTGCGAGCATATACGGGGGGCGTTAGTAATTTATTACCCAGCGGCAGTATATTTGCCGCACAGATCCCCGGAGACGGGCGATCGCTCTCCGTCTCTGATGCAACGATTATCGTTGCAACTCCAGACATGACCGCAAATAATAGCCCGGCAGGATACGCCGCATCAGCCAGTTCATCGTATAGCGCTGCGTATGCGCCGTGGTACGCATTTTCCGTTAGCGATCCGGGATTCTGGAATTCATTGACCAAACCGACGCCTGAAAATCCAGAATGGTTAGCTATATCTCTGCCGTCCGCAATTAAAATATCTGGTTATCAAATTGCTAATAGGGCATCGTCAGTAATCAGTAGCCCCCGCGCTTGGAAATTTCAGGGTTCTAATGATGGTAGTGCATGGCATGATTTGCATTCAGTAGAAAATGATGTGCGAAATGATGCTGGAGTTATTCGGGAGTTTAGATTTAATAGCGCTGTTGCATATTCTAAATATAGACTGCTAATAACACAGTCAAATCCCGATGCTAATTATGTCGTTATTCGTTATTTACGAATACTGCAATTTAATGGAATGCTATTAAATAGCGCTCAAAATCAATGGTACTCGTCGAATAACGGGGTTATTGAGTCAGTTGGTGCTGAACAGTTTGGAATGGGATTCTCATCATCAGGCCAGATTGGTGAAGCTGATTTATCATTAATATCCCCTGCGCGAGTTTGTGCCGCATCACAATTGAGTGTCAAAACATTGTATGCACCGCACACGCAAATAGCGATTAGCCGAGATTTGATGTCAGCCGCATCATGGTCACAAATAAACTCCGCAACGTTACCAGCAACGCAGACGGGCAGCGGTAAAGTGCGTATCGCCGTGACGCGGGATTTAGTGAGTTGGCATGTTCTACAGAGCGGAGCGTGGGTTGATGTGGGGGCGTTGTCAGTAGATACGGCGGGCGCAACGAAACTGATTGCAGACGGCATGACGCCTGCGGAATTCGGCGCTATTACGGCTGCGCAATGGACTGCTCTGTTTTCATCCAACAACGGCGTGCCGGACTCGCTTGCCTTTGCGTTCGCGCTTGATATCACCGATCCATCTGTTGATGTTGCGGCAATAGAGAGATTGCTATTAAACGTAAACAATACATCGTCATGGCGATTACAAAACCCGTCTGATGTTGAAATACGTTGGCGCGCCGATAATGTTTCATTCAAAACCGTTACGGCGGGTAACTACAAATTGGCATATCAAATACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94f444c6e72c62533a10bade60e50712bc8702894797e7401ce8b4a8f1b80668
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6502
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50