Protein

View in Explore
Genbank accession
YP_007006974.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSDQVEIPDIDDLPDMQEAAEFTPAVKLLTTETPVLGYDGTKINPANWQAKALADRTQWLRNQILSVSTRLVLSVNGKTGNVVVTYNDVGADAAGTADALMTAHLTALDPHSQYFDETRGDTRYVQRSLANQSNGWLQLDAAGKIPAAMLQTLASRYVVVANQAARLALASSANLTICAQADIDQLFYLNGGANPAVAANWVAGQSATVSGVSSVFGRTGAVTAQNGDYDADKITETATRKFATPAEKTAWNAKQAALVSGTNIRSLFGNSLLGSGNLAPTPAQMGAAAAVHTHTTADITDYTQKTQQLITASLEAGTGVTLGYNPVSGKTIISAVGGSGGGSGYVVVDRAGATAGQNHTFSVSTQNAFDLAAFALKEEAGAAGVTFLVDEFNASSSASYNATSAIVFDGTLRAYTGGVSNLLPSGSIFAAQIPGDGRSLSVSDATIIVATPDMTANNSPAGYAASASSSYSAAYAPWYAFSVSDPGFWNSLTKPTPENPEWLAISLPSAIKISGYQIANRASSVISSPRAWKFQGSNDGSAWHDLHSVENDVRNDAGVIREFRFNSAVAYSKYRLLITQSNPDANYVVIRYLRILQFNGMLLNSAQNQWYSSNNGVIESVGAEQFGMGFSSSGQIGEADLSLISPARVCAASQLSVKTLYAPHTQIAISRDLMSAASWSQINSATLPATQTGSGKVRIAVTRDLVSWHVLQSGAWVDVGALSVDTAGATKLIADGMTPAEFGAITAAQWTALFSSNNGVPDSLAFAFALDITDPSVDVAAIERLLLNVNNTSSWRLQNPSDVEIRWRADNVSFKTVTAGNYKLAYQIP
Physico‐chemical
properties
protein length:829 AA
molecular weight: 87144,93820 Da
isoelectric point:5,07574
aromaticity:0,08203
hydropathy:-0,02967

Domains

View on InterPro
Domain architecture
YP_007006974.1
1 829 aa
STR 450–598 · RBD 599–623 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_007006974.1
1 829 aa
Domain Start End Length (AA) Confidence
N-terminal 1 361 361 0,9563
Central domain 362 596 236 0,5255
C-terminal 597 829 232 0,2681
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pectobacterium phage ZF40 [NCBI] · taxon 1127516
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pectobacterium carotovorum [NCBI] · taxon 554
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_007006974.1 [NCBI]
Genbank nucleotide accession
NC_019522 [NCBI]
CDS location
range 42843 -> 45332
strand +
CDS
ATGTCAGACCAGGTTGAAATCCCAGATATCGATGATCTGCCCGACATGCAGGAGGCTGCAGAATTTACCCCTGCGGTCAAACTACTGACGACAGAAACACCCGTCCTTGGTTATGACGGCACAAAAATTAATCCCGCGAATTGGCAGGCAAAGGCGCTGGCTGACCGGACTCAGTGGTTACGCAACCAGATACTGAGCGTATCCACGCGGCTAGTATTGTCAGTGAACGGTAAAACGGGAAATGTCGTTGTCACGTATAACGATGTCGGTGCTGACGCAGCGGGGACAGCTGACGCGCTGATGACTGCGCATTTAACAGCTCTCGATCCTCACTCGCAGTATTTTGACGAAACACGCGGTGATACGCGCTATGTTCAGCGGTCGCTGGCGAATCAGTCCAACGGCTGGCTGCAACTGGATGCTGCGGGGAAAATCCCCGCAGCGATGTTGCAAACGCTGGCGTCGCGTTATGTCGTCGTAGCAAATCAAGCGGCGCGGCTTGCACTGGCATCATCTGCAAACCTGACTATCTGCGCTCAGGCCGACATTGACCAGTTGTTCTATTTGAACGGCGGTGCGAATCCTGCCGTGGCCGCAAATTGGGTTGCAGGGCAATCCGCTACGGTTTCCGGCGTATCGTCCGTGTTCGGACGTACTGGCGCGGTTACGGCGCAGAACGGTGATTATGACGCGGACAAAATCACTGAGACGGCAACGCGTAAATTTGCAACGCCAGCAGAAAAAACGGCGTGGAATGCGAAACAGGCTGCGTTAGTTTCCGGCACCAACATCCGATCGCTTTTCGGTAACTCTCTGCTGGGCTCAGGTAATTTAGCGCCAACGCCAGCACAAATGGGGGCAGCGGCGGCGGTTCACACGCACACAACGGCAGATATCACAGACTACACACAGAAAACCCAGCAACTCATTACCGCCTCGCTGGAGGCCGGAACAGGCGTAACGTTGGGTTACAACCCTGTGAGCGGGAAAACGATCATCAGTGCTGTCGGAGGTTCTGGCGGTGGATCGGGATATGTCGTTGTTGACAGAGCTGGAGCGACCGCAGGACAAAATCATACATTCAGTGTCAGCACACAAAACGCGTTTGACCTGGCTGCGTTTGCGCTGAAAGAAGAAGCGGGTGCGGCGGGTGTAACATTTTTGGTTGATGAGTTCAACGCGTCTAGCAGTGCTAGTTACAACGCAACCAGCGCTATTGTTTTTGATGGTACGTTGCGAGCATATACGGGGGGCGTTAGTAATTTATTACCCAGCGGCAGTATATTTGCCGCACAGATCCCCGGAGACGGGCGATCGCTCTCCGTCTCTGATGCAACGATTATCGTTGCAACTCCAGACATGACCGCAAATAATAGCCCGGCAGGATACGCCGCATCAGCCAGTTCATCGTATAGCGCTGCGTATGCGCCGTGGTACGCATTTTCCGTTAGCGATCCGGGATTCTGGAATTCATTGACCAAACCGACGCCTGAAAATCCAGAATGGTTAGCTATATCTCTGCCGTCCGCAATTAAAATATCTGGTTATCAAATTGCTAATAGGGCATCGTCAGTAATCAGTAGCCCCCGCGCTTGGAAATTTCAGGGTTCTAATGATGGTAGTGCATGGCATGATTTGCATTCAGTAGAAAATGATGTGCGAAATGATGCTGGAGTTATTCGGGAGTTTAGATTTAATAGCGCTGTTGCATATTCTAAATATAGACTGCTAATAACACAGTCAAATCCCGATGCTAATTATGTCGTTATTCGTTATTTACGAATACTGCAATTTAATGGAATGCTATTAAATAGCGCTCAAAATCAATGGTACTCGTCGAATAACGGGGTTATTGAGTCAGTTGGTGCTGAACAGTTTGGAATGGGATTCTCATCATCAGGCCAGATTGGTGAAGCTGATTTATCATTAATATCCCCTGCGCGAGTTTGTGCCGCATCACAATTGAGTGTCAAAACATTGTATGCACCGCACACGCAAATAGCGATTAGCCGAGATTTGATGTCAGCCGCATCATGGTCACAAATAAACTCCGCAACGTTACCAGCAACGCAGACGGGCAGCGGTAAAGTGCGTATCGCCGTGACGCGGGATTTAGTGAGTTGGCATGTTCTACAGAGCGGAGCGTGGGTTGATGTGGGGGCGTTGTCAGTAGATACGGCGGGCGCAACGAAACTGATTGCAGACGGCATGACGCCTGCGGAATTCGGCGCTATTACGGCTGCGCAATGGACTGCTCTGTTTTCATCCAACAACGGCGTGCCGGACTCGCTTGCCTTTGCGTTCGCGCTTGATATCACCGATCCATCTGTTGATGTTGCGGCAATAGAGAGATTGCTATTAAACGTAAACAATACATCGTCATGGCGATTACAAAACCCGTCTGATGTTGAAATACGTTGGCGCGCCGATAATGTTTCATTCAAAACCGTTACGGCGGGTAACTACAAATTGGCATATCAAATACCATAA

Genome Context

Tertiary structure

YP_007006974.1
ESMFold structure
Source ESMFold
pLDDT 65.0
Oligomeric state monomer
Download structure