Protein

View in Explore
Genbank accession
WWO60419.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,45
Protein sequence
MAVPDPQLRYATDVFDANGVTTDWQISFTGGYIDPSHVYAMSGILDEETQLLTDRTSHTVEVLSEDENSSTVRVEPAVAAGRKLYIYRSTPVQQMLVDYVNGSIISKTNLNLSNDQLLKIIQEMFDSLNIATLSIDQQVGVVVDLNKIITEIYKEVLELLAAGGIVSVAPRVWSGSWTGDQADDTDFDMVGADVSGAGFYDVYVNGIGMQPDVDYQVTLADGTDPSFIRFATVPAEGSIWFAVLRGYAKPYTGPAPITATSLRVPIIPAEGPTYYADKATEYGLVRCTYAGGCTVNINLIPEVGDGETKLASGSYFSVQQKAGPVVITGDAGVTLEVPAGCIAATRGTNSVVTATCIDGDTNTWLLSGDLAKE
Physico‐chemical
properties
protein length:373 AA
molecular weight: 39844,22570 Da
isoelectric point:4,20236
aromaticity:0,08311
hydropathy:0,04879

Domains

View on InterPro
Domain architecture
WWO60419.1
1 373 aa
ATT 16–133 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WWO60419.1
1 373 aa
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9965
Central domain 259 362 105 0,0432
C-terminal 363 373 10 0,9933
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Stenotrophomonas phage SB5 [NCBI] · taxon 3117469
No lineage information
Host
Stenotrophomonas maltophilia [NCBI] · taxon 40324
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales

Coding sequence (CDS)

Genbank protein accession
WWO60419.1 [NCBI]
Genbank nucleotide accession
PP079417.1 [NCBI]
CDS location
range 35175 -> 36296
strand +
CDS
ATGGCAGTTCCCGATCCCCAGCTGCGCTACGCGACGGACGTATTCGACGCCAATGGCGTCACTACTGACTGGCAAATCAGCTTCACGGGCGGCTACATCGACCCGTCCCACGTGTACGCGATGAGCGGCATTCTGGACGAGGAAACGCAGCTGCTTACCGACCGGACCTCTCACACCGTAGAGGTGCTGTCCGAGGATGAAAACTCCTCGACCGTGCGAGTTGAGCCTGCCGTCGCGGCTGGGCGTAAGCTCTACATCTACCGCAGCACTCCGGTGCAGCAGATGCTCGTTGACTACGTTAACGGTAGCATCATCAGCAAGACCAACCTTAACCTCAGCAATGACCAGTTGCTGAAGATCATTCAGGAAATGTTCGATTCGCTGAACATCGCCACCCTTAGCATCGACCAGCAGGTCGGCGTGGTGGTAGACCTGAACAAGATCATCACCGAGATTTACAAGGAAGTCCTCGAACTTCTGGCCGCTGGTGGTATCGTGTCCGTAGCCCCTCGCGTCTGGTCCGGCTCTTGGACTGGCGATCAGGCGGACGACACCGACTTCGACATGGTGGGCGCGGATGTATCCGGCGCGGGCTTCTACGACGTGTACGTCAACGGTATCGGCATGCAGCCGGACGTGGACTATCAGGTCACGCTCGCTGACGGAACCGATCCCAGCTTCATCCGCTTCGCCACGGTTCCCGCCGAGGGAAGCATCTGGTTCGCCGTACTGCGCGGTTACGCCAAGCCCTACACCGGGCCTGCGCCGATCACCGCTACGAGCCTGCGGGTGCCGATCATCCCGGCAGAGGGTCCGACCTACTACGCCGACAAGGCTACCGAGTACGGACTCGTGCGCTGCACGTACGCCGGGGGCTGCACCGTCAACATCAACCTGATCCCCGAGGTCGGCGACGGTGAGACGAAGCTCGCCTCGGGGAGCTACTTCAGCGTGCAGCAGAAGGCAGGCCCGGTGGTCATCACCGGCGACGCGGGCGTAACTCTCGAAGTACCAGCCGGCTGCATCGCCGCAACTCGCGGCACCAACTCCGTCGTCACTGCAACGTGCATCGACGGCGACACCAACACATGGTTGCTCTCGGGCGACTTGGCTAAGGAGTAG

Genome Context

Tertiary structure

WWO60419.1
ESMFold structure
Source ESMFold
pLDDT 80.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank