Protein

View in Explore
Genbank accession
WPK20336.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNGGYNDASWIPDDMYVPNGQLDVSKIPLLTVNGRGLVNGGNCGVMLYAFRSDGSSSPNNFQWSASHPFGYPLSSTALSNQVAPVGFSIVPCPTRPGRKRFRFPGKKLAGRPLPFQGSTQWWGAVNSFSLRYNNPLSGVGEDDTASISFVVRFARRFSHQSGAQLAWYFSVGYPSVRVNPPGSAWTNYGITYMVPGFLASYVIFGSSQVLNLSSSTPQPNECYTPKDGLPWVYLDPGASASKLTVPNYTSPGLDGDFFKFEVDRDYHIEIKLMKNGDNRTTRPMSMVIIDGVTVKNYGGVTNTDFSVPNTGDLADSDRRDRDYLGAFQFNFQMNHWSGGSNSTSWFYPNMTEECGPMMISDIVFGTYPQSDHANYAFGPTTRVWGESPNTDIKTSFKRPEGASSNASVVGRPMKVNTPETSSELSGTIGDSDEYKTDGSSMPDFAGTVLAVQLKTVARAESSDGTIVSTFDGKEVGEVPLASSTGANYSTVVHTVEMSNPISPSDVAEKPFGFKVKEE
Physico‐chemical
properties
protein length:518 AA
molecular weight: 56277,90490 Da
isoelectric point:5,40518
aromaticity:0,11583
hydropathy:-0,38591

Domains

View on InterPro

No domain architecture available.

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WPK20336.1
1 518 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0348
Central domain 11 200 191 0,1610
C-terminal 201 518 317 0,5504
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage SD-12_S18 [NCBI] · taxon 3096168
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Salmonella typhimurium [NCBI] · taxon 90371
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
WPK20336.1 [NCBI]
Genbank nucleotide accession
OR699185 [NCBI]
CDS location
range 51058 -> 52614
strand +
CDS
ATGAACGGGGGGTATAACGATGCTTCGTGGATTCCGGACGATATGTATGTGCCTAATGGCCAATTGGACGTTTCTAAGATCCCGTTACTGACGGTTAACGGTAGAGGTCTTGTTAACGGAGGGAATTGTGGGGTGATGCTTTACGCATTCCGTTCTGATGGGTCTTCCTCTCCTAATAATTTCCAATGGAGTGCATCACACCCGTTTGGGTATCCGCTATCGTCTACGGCGTTATCCAATCAAGTTGCGCCGGTGGGTTTTTCGATTGTTCCTTGCCCCACAAGGCCTGGTCGGAAACGTTTTAGATTCCCCGGGAAGAAATTAGCTGGCCGACCTTTACCGTTCCAAGGGTCTACACAGTGGTGGGGGGCCGTTAATAGTTTTTCTTTGAGGTACAATAATCCGTTGTCTGGGGTAGGAGAAGACGACACGGCGAGTATTTCGTTCGTAGTTCGTTTTGCCCGTAGGTTCTCACACCAAAGTGGCGCTCAACTGGCGTGGTATTTTTCTGTCGGGTATCCGAGTGTTCGGGTAAACCCGCCGGGGAGCGCTTGGACTAACTACGGGATAACATATATGGTTCCCGGGTTCTTGGCTAGCTACGTTATTTTCGGAAGCTCGCAAGTGTTGAACCTTAGTAGTAGCACCCCGCAACCAAACGAATGTTATACTCCTAAAGACGGCCTACCTTGGGTTTACCTTGACCCGGGGGCTTCGGCCTCAAAATTAACGGTACCTAACTATACTTCTCCCGGGCTTGATGGTGACTTTTTTAAGTTTGAGGTGGACAGGGACTACCACATAGAAATAAAACTCATGAAGAACGGAGATAACCGCACAACGCGTCCTATGAGTATGGTGATTATTGACGGTGTCACGGTTAAGAACTACGGTGGGGTTACTAATACGGATTTCTCCGTGCCTAACACCGGGGATTTAGCCGACTCCGACCGGCGTGATCGAGATTATCTCGGTGCTTTCCAGTTTAATTTCCAGATGAACCACTGGTCAGGTGGGTCGAATTCTACCTCTTGGTTCTATCCAAATATGACAGAAGAATGTGGCCCGATGATGATAAGTGATATTGTGTTCGGTACATACCCTCAATCTGACCATGCTAATTATGCTTTCGGCCCTACTACTCGCGTGTGGGGAGAGAGTCCGAATACAGACATAAAAACCTCGTTTAAGAGACCCGAAGGCGCCTCATCGAACGCTAGTGTAGTTGGAAGACCGATGAAAGTGAATACTCCTGAAACTTCGTCAGAACTATCAGGGACTATCGGGGACTCCGACGAATACAAAACGGACGGAAGTTCTATGCCGGATTTCGCCGGTACGGTTCTAGCAGTTCAACTAAAAACTGTCGCGAGAGCGGAATCCTCCGACGGCACTATCGTATCTACTTTCGACGGCAAAGAGGTCGGTGAAGTACCTTTAGCGTCTTCTACCGGGGCTAACTACTCTACGGTTGTCCACACGGTAGAGATGTCTAACCCGATATCTCCTAGTGATGTTGCGGAAAAACCTTTCGGATTTAAGGTGAAAGAGGAGTAA

Genome Context

Tertiary structure

WPK20336.1
ESMFold structure
Source ESMFold
pLDDT 47.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence a group of lytic Salmonella phages Dlamini,S.B., Montso,P.K., Ateba,C.N., Mnisi,M.C. and Mlambo,V. 2023-09 — GenBank