Phage RBP Database

Genbank accession

UVD41334.1 [GenBank]

Protein name

putative tail fiber protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,98

Seq2Symm

C3 confidence 0,998

C3	0,998
C6	0,002
C1	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTVSTTDSVIEYEGNGVTTAFPVPFKFPANGDLVVTQVYNDVSTTLALGTNYSVVGAGAQAGGAVIVNVPTPDGATLSISRSLDAVQETDLRNQGRYFAETHESVFDYLTMLIQQGFSGLSRALRRPIGKDYFDAESRRISNVSDPVLAQDAATRKWSQEYFSDLISDIQGPVNNAQNVLYVDGDGISTTVQKGVIKQFTSVSDVRGKPGDKDGEQAVLLGYYQDAPGVGGGNLYWDSLSVEPDNGGSVFAVTGAAIGRWKRDITHGVWAEWFGARNDGTDAAGTTAAVWAAIIALRHDPETIVQYIGGPTVTAYASGRLNFGNGVFALQPDSFDITQDLGLTIVGQGFRGKNQAMKAATTLLCKGVSSGFFFRHHGNGARNLTFKDMDVVYENSDFTGDIVESLTSPGLTLERTRLGCYGGLLGTRVQTARSCIRPTFDEFLRCEDVVFDGAQNGFWSDGARTIPGLSFGGWGTTLINCTFYDLANSMIHHAANRSRSIVNVIGCAFNPINISPARCFDITNIEGINVTGNQFTPSTGSQPTQEWIRLLDSTGAIDGNTFSGQSSKLGTIGGVNPSSIRFSNNRVFCQGGLVVSGGIFTGSGNEYSIADHGVDVSPVAITTLDIGPDIFKSGVSGNSYRISADSSLLGGRINYIFEQDNSNSKFSNVSSRVSIDNVDRRISTIGSLPSTASPYFSGRTYNVTVAGTFTLPTPIPGIRLRVMKSTATALTVSTTSGSNILVGASSARTSAVATAAEIGPAIEFVAFSSASWVAQVLSGSWSFS

Physico‐chemical properties

protein length:	783 AA
molecular weight:	83021,37010 Da
isoelectric point:	5,16021
aromaticity:	0,09323
hydropathy:	-0,06347

Domain architecture

UVD41334.1

1 783 aa

RBD 198–264 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059934
RBD

IPR059934

UVD41334.1

1783 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0055
ATT

DC_0055 DC_0717

DC_0743
STR

DC_0743

UVD41334.1

1783 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059934	RBD	DC_0541	198	264	InterPro cluster	Phage tail protein-like, small four-stranded beta-sheet domain	C-terminal	Low	Positional only	683 proteins / 690 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

UVD41334.1

1 783 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	284	284	0,9972
Central domain	285	677	394	0,9816
C-terminal	678	783	105	0,9872

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage vB_Pae_HB2107-3I [NCBI] · taxon 2961987

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Pseudomonas aeruginosa PA14 [NCBI] · taxon 652611

Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas

Genbank protein accession

UVD41334.1 [NCBI]

Genbank nucleotide accession

ON778006 [NCBI]

CDS location

range 8086 -> 10437
strand -

CDS

TTGACTGTCTCGACAACTGATAGCGTTATCGAATACGAAGGCAATGGAGTCACTACGGCTTTCCCTGTGCCTTTCAAGTTCCCGGCTAATGGCGACCTTGTGGTAACTCAGGTCTACAACGACGTTTCGACAACCCTCGCGCTTGGAACTAACTACTCAGTGGTTGGTGCTGGTGCACAGGCTGGTGGGGCGGTAATTGTCAACGTGCCAACTCCGGATGGTGCGACTCTTAGCATTTCCAGAAGCCTGGATGCAGTTCAAGAAACCGATCTGCGCAACCAAGGTCGGTATTTCGCGGAGACGCATGAGAGCGTTTTCGACTATCTCACGATGCTGATTCAGCAGGGGTTCTCAGGTCTTTCCAGGGCCTTGAGGCGCCCAATAGGCAAAGACTACTTTGACGCCGAGAGTCGAAGAATTTCCAATGTCTCCGACCCGGTTCTTGCGCAGGATGCGGCAACCAGGAAGTGGTCCCAAGAATATTTTTCTGACTTGATAAGTGATATTCAGGGACCGGTAAACAATGCGCAAAATGTGCTTTATGTGGACGGTGACGGAATATCAACTACCGTTCAGAAGGGAGTTATAAAGCAATTCACCTCCGTCTCTGATGTAAGGGGAAAACCGGGAGATAAGGATGGGGAGCAAGCAGTCCTTCTTGGATACTATCAAGACGCGCCAGGGGTTGGGGGCGGAAACTTGTACTGGGATTCTCTCTCCGTAGAGCCAGACAATGGCGGATCGGTCTTTGCTGTCACCGGAGCCGCCATCGGTCGCTGGAAGCGCGATATCACCCATGGCGTTTGGGCCGAGTGGTTCGGAGCTCGCAATGACGGCACGGATGCGGCAGGAACTACTGCGGCGGTATGGGCCGCAATCATCGCACTCCGGCACGACCCGGAGACGATCGTGCAGTACATCGGCGGCCCCACTGTCACAGCGTATGCATCCGGGCGACTGAACTTCGGTAACGGGGTCTTTGCACTCCAGCCTGATAGTTTCGATATTACCCAGGACCTCGGCCTGACCATCGTCGGGCAGGGATTCAGAGGTAAGAACCAGGCGATGAAGGCGGCTACCACGTTGCTCTGCAAGGGAGTTTCAAGTGGATTTTTCTTCCGCCACCACGGGAATGGCGCCCGTAATTTGACATTCAAAGATATGGATGTCGTATATGAGAACTCGGATTTCACTGGAGATATAGTTGAGAGCCTGACATCTCCCGGCTTGACGCTTGAGAGGACTAGGCTTGGCTGCTATGGAGGCCTTCTTGGAACTCGCGTTCAAACCGCGAGAAGCTGTATCCGACCAACTTTCGACGAATTTTTGCGTTGCGAAGACGTTGTGTTTGATGGCGCTCAGAATGGCTTTTGGTCAGATGGTGCGCGGACAATTCCAGGTCTGTCTTTTGGTGGCTGGGGTACGACCCTTATAAACTGTACGTTCTATGATCTTGCCAATTCCATGATACATCACGCGGCTAATAGAAGTAGAAGTATTGTTAATGTAATTGGGTGTGCGTTCAATCCTATCAATATAAGTCCTGCTAGGTGTTTTGACATTACCAACATTGAGGGAATCAATGTGACCGGAAATCAATTTACACCAAGCACGGGAAGCCAGCCAACGCAAGAATGGATTAGGCTTCTAGATAGCACTGGCGCTATAGATGGGAATACGTTTTCAGGCCAATCCTCAAAGCTCGGAACCATTGGAGGCGTAAATCCTTCGTCAATCAGGTTCTCTAACAATAGGGTATTCTGCCAAGGTGGTCTTGTAGTATCCGGAGGAATTTTTACAGGCTCTGGAAACGAATATTCTATAGCTGATCATGGAGTTGACGTATCGCCAGTGGCTATTACTACTCTTGATATTGGTCCTGATATTTTCAAGTCTGGAGTATCTGGGAACTCATATCGCATCTCTGCGGATAGCTCCCTTCTTGGCGGGAGAATTAACTACATATTTGAGCAGGATAACTCAAATAGTAAGTTTTCAAATGTTTCCTCAAGGGTCTCAATTGATAATGTTGATAGGAGAATATCTACTATAGGCTCTCTCCCATCTACCGCGTCTCCGTATTTTAGCGGAAGAACCTATAATGTTACCGTTGCGGGTACATTCACATTGCCCACTCCAATTCCGGGAATTAGATTGAGAGTAATGAAAAGCACAGCGACGGCACTGACAGTATCTACCACATCCGGCTCGAATATTCTTGTCGGTGCCAGTTCGGCAAGAACCTCTGCCGTTGCGACAGCCGCCGAGATTGGGCCAGCAATTGAGTTTGTTGCTTTTAGCTCTGCATCATGGGTGGCGCAAGTCCTGTCAGGGTCTTGGTCATTCAGCTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)