Protein

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Genbank accession
XAG94870.1 [GenBank]
Protein name
Ig-like virion protein
RBP type
TF
Evidence RBPdetect
Probability 0,56
Protein sequence
MPTITVLVAPEVVRNKPETERNHVVTGVAKGWQKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPIGFQVSYEIHDPNAILTTGLVITPATASGEIGQFVELLATVSPANATYQGVNWYSGDLTKAIHIGGGKFKLLQSGSVTVYGVTVEGNHTDSTVITVAGALSLSTDLPATKDVTSGQDGTFSVVAAGGTTPYTYVWHFSDTPGGAGSVIDAGTNATAATANLVITAVEAANEGEYWCVVSDADGHSVTSTRCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27896,81910 Da
isoelectric point:4,63820
aromaticity:0,05948
hydropathy:0,03346

Domains

Domains [InterPro]
G3DSA:2.60.40.1080
87–170
G3DSA:2.60.40.1080 IPR013783
IPR007110
164–260
IPR007110
IPR036179
179–263
IPR036179
IPR003599
180–269
IPR003599
PF13927
182–252
PF13927
cd00096
200–262
cd00096
XAG94870.1
1 269
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SF02
[NCBI] 		3141821 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG94870.1 [NCBI]
Genbank nucleotide accession
PP706106 [NCBI]
CDS location
range 79179 -> 79988
strand +
CDS
ATGCCAACAATCACAGTATTAGTCGCACCGGAAGTTGTCCGCAACAAACCCGAAACCGAACGCAATCATGTCGTGACGGGTGTTGCAAAGGGTTGGCAAAAGACCAGCCTCAACCAAGATCCTGACGAGATCCTGACCGAATGTAAAGGTCTTGACGCTCTTCTCACCAAGAGCAATTTACAAGCGGACGGTGTCACCAAAGTGGATCCCACCAAGCCTATCGGCTTTCAAGTATCTTATGAAATCCACGATCCGAATGCTATTTTAACCACCGGACTTGTGATTACTCCAGCTACAGCCAGCGGAGAGATCGGACAATTTGTTGAATTGCTAGCGACGGTATCCCCTGCCAATGCCACATATCAAGGCGTTAACTGGTATTCTGGTGACCTGACGAAGGCGATCCATATCGGCGGTGGTAAATTCAAACTGCTTCAGTCTGGTTCTGTTACAGTTTATGGTGTCACGGTTGAAGGGAATCACACAGATTCTACGGTTATTACAGTTGCAGGCGCTCTATCGCTGTCGACTGATTTACCTGCCACCAAAGACGTAACTTCTGGACAAGACGGAACCTTTAGTGTTGTTGCTGCGGGCGGTACAACTCCATACACTTATGTGTGGCATTTCTCTGATACTCCTGGGGGTGCGGGGTCAGTTATCGATGCTGGCACTAATGCCACCGCCGCCACTGCTAACCTGGTTATCACAGCAGTTGAAGCCGCAAATGAAGGCGAATATTGGTGTGTTGTTTCTGATGCAGATGGCCATTCTGTCACGTCTACTCGTTGTGAAATGGCTGTGGTGTAA

Tertiary structure

PDB ID
a05fb179ba637cfe78e292442990ad67ffa00f6f9cfa80a3ee91ea903e95dd5b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7294
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and application of a novel polyvalent bacteriophage SF02 for the control of Salmonella and Escherichia coli O157:H7 in foods Hou,P.-F. 2024 — GenBank