Phage RBP Database

UniProt accession

A0A6J7WYD5 [UniProt]

Protein name

Pectate lyase superfamily protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,92

Seq2Symm

C3 confidence 0,994

C3	0,994
D3	0,026
C1	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MALTKVSYSMIEGACVNVFDFIPAAQIPLIQTHNVAAQDGAAIVTGINAALEYARLQGQPTAYNARPVVFMPAGTYRIADSIIAKDYACLQGEGPRSTTINTAFVGKSAIRGQYGENPAYADRTIGWDMRDFSIENSLHSALGVQGLAQGGSANTITLESTASAVDDYYVGWLVKLEGGPGSFQQANITAYNGTTKVATISGTFSPVPTSATRYRLMSNSIGLNMGSTGYSTIENINIVGYTICMYTTNNGYYNTWLTVKAFGYIGFWLESDGGANVLLNCESQFTYQGVRVDRGDFVMTTGSIESLVFDTTDGTAQAGGASTITLAASASSVNQKWTGFRILIESGTGAGQSRTISNYNGTTKVATVDTAWATQPDSTSTYHIGSAAPHACNYVGFGPVGTTAALKSVNVYYETYTRTSQLGDYGSTMFQCTLISPAKRGYASVLSVAVPSQFIVMSFLGDYTPFTRNVQVEFATAIQGSPTAFLRAPSGNQVDVYAQDNINFGYLGANAFCPNGSFNNRWTSGTGSPEGSVTASPGALYTNISGGAGTTLYVKEGGNGNTGWVGK

Physico‐chemical properties

protein length:	567 AA
molecular weight:	59805,84130 Da
isoelectric point:	5,34658
aromaticity:	0,10935
hydropathy:	-0,05608

Domain architecture

A0A6J7WYD5

1 567 aa

STR 22–386 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

IPR012334
STR

IPR012334

A0A6J7WYD5

1567 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2009
RBD

DC_2009

A0A6J7WYD5

1567 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	22	349	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	39	386	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0A6J7WYD5

1 567 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	38	38	0,8714
Central domain	39	467	430	0,9795
C-terminal	468	567	99	0,8343

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch

Host No host information

No CDS data available.

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)