Phage RBP Database

Genbank accession

CAB5230058.1 [GenBank]

Protein name

short tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MNLVNVKSSKQLSVKSQIENLQNELLKMPQSDIVTKHNFRPGLYERTIIIPPWTVLTGAEHKTGYTVRLEKGTIAVNVEDSVKILTAPMEFESKPGAQRVGRVYEEEVIWTDIYKNTDNCQDLEILEERLFVIPECGLQDNRIKKQLKEIQEDYKLFCEEIGLNQKEIDKIVLITSDLMDMPKEYFTEIRLSKIHGKGLFATKEFKMWDVVCPCRIDGKRTPGGRFVNHSNKQNLMPIKIGDNIYAVACKDIYQNEELLLDYRSMVRVNFGITLKGELPCQPEYQAQ

Physico‐chemical properties

protein length:	287 AA
molecular weight:	33147,93720 Da
isoelectric point:	5,94913
aromaticity:	0,07666
hydropathy:	-0,42787

Domain architecture

CAB5230058.1

1 287 aa

RBD 174–281 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR001214
RBD

IPR001214

IPR046341
RBD

IPR046341

IPR001214
RBD

IPR001214

IPR001214
RBD

IPR001214

IPR046341
RBD

IPR046341

cd08161
RBD

cd08161

IPR046341
RBD

IPR046341

CAB5230058.1

1287 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0531
STR

DC_0531

CAB5230058.1

1287 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR001214	RBD	DC_0038	174	262	InterPro cluster	SET domain	C-terminal	Low	Positional only	13 proteins / 27 hits
IPR046341	RBD	IPR046341	182	269	Merged direct domain	SET domain superfamily	C-terminal	Low	Positional only	3 proteins / 3 hits
IPR001214	RBD	DC_0038	185	263	InterPro cluster	SET domain	C-terminal	Low	Positional only	13 proteins / 27 hits
IPR001214	RBD	DC_0038	185	269	InterPro cluster	SET domain	C-terminal	Low	Positional only	13 proteins / 27 hits
IPR046341	RBD	IPR046341	185	265	Merged direct domain	SET domain superfamily	C-terminal	Low	Positional only	3 proteins / 3 hits
cd08161	RBD	DC_0038	188	263	InterPro cluster	cd08161	C-terminal	Low	Positional only	13 proteins / 27 hits
IPR046341	RBD	IPR046341	216	281	Merged direct domain	SET domain superfamily	C-terminal	Low	Positional only	3 proteins / 3 hits

Proteins with similar domain architecture

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch

Host No host information

Genbank protein accession

CAB5230058.1 [NCBI]

Genbank nucleotide accession

LR798406.1 [NCBI]

CDS location

range 13189 -> 14052
strand -

CDS

ATGAATCTTGTAAACGTAAAATCTTCTAAACAATTGTCCGTTAAATCGCAAATAGAAAATTTGCAAAACGAACTATTAAAAATGCCTCAATCTGATATTGTTACAAAGCACAATTTTCGTCCGGGCCTTTATGAAAGAACAATTATTATTCCACCTTGGACTGTATTAACGGGCGCAGAACATAAAACTGGTTATACGGTTCGTTTAGAAAAAGGAACTATTGCGGTAAATGTTGAAGATTCTGTAAAAATATTGACTGCACCAATGGAGTTTGAATCAAAGCCAGGGGCGCAACGTGTAGGCCGAGTTTATGAAGAAGAAGTAATATGGACGGATATTTATAAAAATACTGATAATTGCCAAGATTTAGAAATTTTGGAAGAAAGACTGTTTGTAATTCCTGAATGTGGCTTGCAAGATAACAGAATAAAAAAACAATTAAAAGAAATTCAAGAAGATTACAAGCTTTTTTGTGAAGAAATTGGCCTAAATCAGAAAGAAATTGATAAAATAGTATTAATTACAAGTGATTTAATGGATATGCCTAAAGAATATTTTACTGAAATTAGGCTTTCTAAGATTCATGGAAAAGGTTTATTTGCAACAAAAGAATTTAAAATGTGGGATGTTGTTTGTCCTTGTCGCATTGATGGAAAACGCACCCCTGGCGGTAGATTTGTTAATCATTCAAATAAACAAAATTTAATGCCAATTAAAATTGGTGACAATATTTATGCGGTTGCTTGTAAAGATATTTATCAAAACGAAGAATTGCTTTTAGATTATCGTTCTATGGTTCGTGTTAATTTTGGTATTACATTAAAAGGAGAACTTCCATGTCAGCCGGAGTATCAAGCACAGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)