Protein

View in Explore
Genbank accession
AZF92795.1 [GenBank]
Protein name
collagen-like surface protein
RBP type
TF
Evidence RBPdetect2
Probability 0,61
TF
Evidence Phold
Probability 1,00
Protein sequence
MQIWIHDKSMRKVCALNNNVPGMLPYSNSQWHTYLEYSSSTFDFTIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLVEYDFSFQVTCNNTNLELAAEISRPLASVDGPKTLEWYLRNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKRFVIDIYQRPDENHHGIGKVRGDVILYYQTGLKGVQVSSDKTQLFNYGYFLGKDGLNLASVELEEKNELGKIEFYTPKGDPVIYAPLSADKYPSSLGGANETDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSAQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSSELQRRIDEIISKSLPYHVEIRTTNGTAFKNGIGRSTVKPVLKQGDKIVDATYRFVIDGSIVSSGLTYTVKASDITKPTVVTISAWVDNKEVASEEITFFNVSDGEQGPKGDRGEQGPKGDRGEQGPKGNQGIPGPKGSDGKTQYTHIAYADTISGSGFSQTDVNKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGKDGIPGKAGADGKTPYVHFAYADSADGQTGFSLTQTGSKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGRNLLLKTNQGVTNWNWDLSDGDKIVEEIKVDGIRAVKLIKGSTTANTGWNYISYHGLLRELIQPNTKYVLSFDVKPSVDVRLNATLARGDFNELLTDYVPMNKANANQWTKVSCVLTSKETLPDDLTQFVYLSGMPTTNGNWVIIKNIKLEEGEIPTQWTPALEDTQDQINSKADDVLTQAQLNRLNETNSIIKAELDAKASLDTLNQWVEAYQDFVSSNNANRAQAEKDLADASARVTKLYNDLNDMSERWNFIDSYMTASNEGLVVGKTDNSSSMLFSPNGRISMFSAGHEVMYISQGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:994 AA
molecular weight: 111258,65840 Da
isoelectric point:5,17106
aromaticity:0,10262
hydropathy:-0,51781

Domains

Domains [InterPro]
IPR010572
142–382
IPR010572 IPR008160 IPR008979 Coil
IPR050149
493–597
IPR050149 G3DSA:2.60.120.260
AZF92795.1
1 994
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC982
[NCBI] 		2365059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF92795.1 [NCBI]
Genbank nucleotide accession
MH937482 [NCBI]
CDS location
range 15803 -> 18787
strand +
CDS
ATGCAAATCTGGATTCATGATAAAAGTATGCGTAAGGTGTGTGCTTTGAATAACAACGTTCCTGGCATGCTTCCGTACTCAAACAGTCAATGGCACACCTACCTTGAATACTCAAGCAGTACATTTGACTTCACAATTCCTAAAATTGTAAATGGCAAGCTACACGATGATTTAAAATACATCAATGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTCTCTCAACTCGTTGAATATGATTTTAGTTTTCAAGTGACTTGTAACAATACCAACTTGGAACTTGCAGCAGAAATATCGCGTCCTTTAGCCAGTGTTGATGGTCCTAAAACACTTGAGTGGTATCTTCGGAATCTTGAATTGCTTGGTTTTGCAGGACTTGAAATAGGTGTCAATGAAATTTCTGATAGGACAAGAACGCTTACTTTTGAATCACAAAGTGGCACAAAGCTAGAACAACTTCATAGCTTGATGAATCAATTTGATGCTGAATTTATTTTTCGTACCGAATTAAACCGAGATGGCACTTTGAAACGCTTCGTCATTGACATTTACCAACGCCCCGATGAAAACCACCATGGGATTGGTAAGGTCCGAGGTGACGTCATTCTCTATTATCAAACAGGATTGAAAGGCGTCCAAGTATCTAGCGATAAGACCCAACTTTTTAACTATGGCTATTTTCTCGGAAAAGACGGCTTAAACCTTGCAAGTGTTGAATTAGAGGAAAAGAACGAGTTAGGAAAAATAGAGTTTTATACTCCTAAAGGCGACCCTGTTATTTACGCACCACTGTCAGCAGATAAATATCCATCCTCTTTAGGCGGAGCTAACGAAACAGATAGATGGACACGTAGGGACTTTCAGACAGAATACAGTGATGTTGATTCCCTAAAGGCTTATGCCTTACGTACTATCAAGCAGTATGCTTATCCACTAATGACTTATACTGTCAGCGCTCAATCTAGTTTTATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCGTCTAGCGAATTACAACGACGTATCGATGAGATTATTTCTAAATCATTGCCATATCACGTTGAGATAAGGACCACGAATGGTACAGCATTTAAGAATGGTATTGGTCGTTCTACTGTTAAACCAGTTTTGAAACAAGGCGATAAAATTGTTGATGCAACATATCGCTTTGTAATTGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTGGTAACAATTTCCGCTTGGGTAGATAATAAAGAAGTTGCTTCAGAAGAGATTACTTTTTTTAATGTATCAGATGGGGAACAAGGGCCAAAAGGTGACCGTGGTGAACAAGGGCCAAAAGGTGACCGTGGTGAACAAGGGCCAAAGGGAAATCAAGGTATTCCCGGACCTAAAGGTTCTGACGGAAAAACCCAATATACACATATTGCATATGCTGATACAATTTCAGGTAGTGGCTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTATCAAGACTTCAATGCCGAAGATAGCAAAAACCCACAAGATTATCGATGGTCTAAGTGGAAAGGTAGCGATGGTAAAGATGGGATTCCTGGTAAGGCTGGGGCAGACGGGAAAACACCTTATGTCCACTTCGCTTACGCAGATAGCGCCGATGGTCAAACTGGGTTCAGTTTAACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACTAACCCATCTGATTATACTTGGAATGACACTGCTGGAAGTGTTTCAGTTGGTGGTCGGAACTTGCTTTTAAAAACAAATCAAGGTGTTACTAATTGGAATTGGGATCTTTCTGATGGCGACAAGATCGTTGAAGAAATAAAAGTTGATGGCATTCGTGCTGTAAAACTAATCAAAGGTTCAACAACAGCAAACACTGGTTGGAATTACATTTCATATCACGGTTTGCTGCGTGAACTCATACAGCCGAACACTAAGTATGTTCTTTCGTTCGATGTTAAACCAAGCGTTGATGTACGTTTAAATGCAACGCTGGCAAGAGGTGACTTTAATGAGTTGTTAACTGACTATGTTCCTATGAATAAAGCTAATGCAAATCAGTGGACTAAAGTATCATGTGTATTGACAAGTAAAGAAACTCTTCCAGATGATTTAACTCAATTTGTCTACTTATCAGGTATGCCAACAACAAACGGTAATTGGGTAATAATTAAAAATATCAAACTCGAAGAAGGTGAAATACCTACTCAGTGGACACCAGCTTTGGAGGACACGCAAGATCAAATCAATAGCAAAGCTGACGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCATCACTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAGATTTTGTTAGCTCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACAAAACTATACAATGACTTAAATGATATGTCAGAACGTTGGAATTTCATTGATAGCTACATGACTGCATCAAACGAGGGTCTTGTTGTTGGTAAAACTGATAATTCTAGTTCTATGCTTTTCAGTCCTAATGGGCGTATCTCAATGTTCTCAGCTGGGCACGAGGTAATGTATATCTCGCAAGGTGTGATTCATATTGAGAATGGTATTTTCTCGAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Tertiary structure

PDB ID
116616858b056342822b7ee2284613922d6d8585bfe0e19da561550a559165a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7457
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank