Protein

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Genbank accession
YP_919019.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANKISTVRTYPLNGSVNFTITFEYLARKFVLVTLIGKDRKELVLNQDYRFTTKTQITTGRTWTAADGYEMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLIADTIGVNNDGNLDARGRKIVNLAFATSDYDAVPLKQITDRESSVWNAVTKASEHADRSNKEANRSRDEADRAKREADRSTQQAGVSATQAVEAKKQADRSNSEANRSKGYADSMTASVEAAKGHAESASKEANRSRAEANRAADEVTKAAAEVSKAAAHVASAKNQADRSSTEANRAKSEADRAKTEADKLGNINEFAGTLEKVEGVTPTFKSGIKLRSGDFYAESGSFTKKTQGGDWSQWTGALTPDVQHDIEGQGNIAYLLERATTLSKEPLYAKCLYNNGVGENFFIRQYLRDAHFDLRADGALISSSGWSIPADGNLYIKKYGSNLDTWVNKRLSAHAYSKGEVNKMVDGLLTTEQGDARYARKSSGWTEVWQGSAGGGVSVSLSQDVRWRTIWILVNNGMCSVQIGADATYFVVVMGGWLKFTISNNGRTFRNDQDRNTVPEQILVRN
Physico‐chemical
properties
protein length:569 AA
molecular weight: 62582,60830 Da
isoelectric point:8,49308
aromaticity:0,07909
hydropathy:-0,58489

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil Coil Coil G3DSA:2.60.320.30
DC_0264
STR
1–568
DC_0264
YP_919019.1
1 569
Architecture
ATT
STR
ATT 1-130 | STR 131-568 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage Berlin
[NCBI] 		369257 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Yersinia pestis
[NCBI] 		632 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_919019.1 [NCBI]
Genbank nucleotide accession
NC_008694.1 [NCBI]
CDS location
range 31925 -> 33634
strand +
CDS
ATGGCTAACAAAATTTCCACTGTACGTACTTATCCGCTGAACGGTTCCGTGAACTTCACGATTACCTTTGAGTATCTAGCACGTAAGTTCGTCCTAGTGACACTTATAGGGAAAGACCGTAAGGAGTTGGTTCTTAATCAGGACTACCGCTTTACCACTAAGACCCAAATCACAACCGGCCGTACATGGACTGCTGCGGATGGCTATGAGATGATTGAGATTCGTAGATTCACTTCTGCAACCGACCGTCTGGTTGACTTTGCTGATGGCTCAATCCTTCGCGCATATGACCTTAACATCTCACAGATTCAGACACTACACGTAGCTGAGGAGGCACGAGACCTTATTGCGGATACTATTGGTGTCAACAATGATGGCAACCTAGATGCCCGTGGTCGTAAGATTGTGAACCTAGCGTTTGCTACTAGTGATTATGATGCTGTCCCTCTGAAGCAGATTACAGACCGTGAGTCCTCTGTGTGGAACGCTGTGACCAAAGCTAGTGAACATGCTGACCGTTCTAACAAGGAAGCCAATCGCTCACGGGACGAAGCTGACCGTGCTAAACGTGAAGCTGACCGCTCGACCCAACAGGCAGGTGTCTCTGCGACACAAGCAGTTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGTTCTAAAGGTTATGCTGATAGTATGACAGCCAGTGTTGAAGCTGCTAAGGGCCATGCTGAGAGTGCCAGTAAGGAAGCTAATCGTTCCCGTGCTGAGGCTAATCGTGCTGCTGATGAAGTTACTAAGGCCGCTGCTGAGGTTTCCAAAGCTGCTGCACATGTGGCTAGTGCTAAGAATCAGGCCGACCGTTCCAGTACTGAGGCTAATCGTGCTAAGAGTGAAGCAGACCGTGCTAAGACTGAGGCCGATAAGTTAGGCAATATCAATGAGTTCGCTGGAACTCTCGAGAAGGTGGAGGGAGTAACACCAACTTTCAAATCGGGGATTAAACTTCGTTCTGGTGACTTCTATGCCGAGAGTGGTAGCTTCACTAAGAAAACACAGGGTGGCGATTGGAGCCAGTGGACTGGAGCTCTGACACCAGATGTACAACATGATATAGAAGGACAAGGGAACATCGCGTATCTCCTTGAGCGAGCTACAACTTTGAGTAAAGAGCCCTTATATGCTAAGTGCCTATATAATAATGGTGTTGGCGAAAACTTCTTTATCAGGCAGTATCTTCGAGATGCACATTTTGACTTACGCGCCGATGGTGCTCTTATCAGCTCTTCTGGTTGGAGTATCCCAGCCGATGGTAACTTATACATCAAGAAGTATGGGTCGAATCTTGATACATGGGTTAATAAGCGCCTAAGTGCACACGCCTACAGCAAGGGTGAAGTTAACAAGATGGTCGATGGACTACTCACTACCGAACAAGGTGATGCTCGTTATGCACGCAAGAGCTCTGGTTGGACTGAGGTATGGCAAGGCTCTGCTGGTGGTGGTGTTTCAGTAAGCCTCTCACAGGATGTCCGCTGGAGAACTATCTGGATTCTAGTTAATAATGGCATGTGTTCTGTTCAGATTGGAGCTGATGCTACTTACTTCGTGGTGGTTATGGGTGGTTGGTTGAAGTTCACAATTTCCAACAACGGGAGAACTTTCCGTAACGACCAAGATCGAAATACAGTACCTGAGCAAATCTTAGTTCGAAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d014e9f121fd72e570d570d0bbf9b3c8d0cabe55c16ac46ecd2105b4d7fe782e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequence of bacteriophage Berlin Rakin,A. 1995-06-15 — GenBank