Protein

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Genbank accession
YP_919019.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANKISTVRTYPLNGSVNFTITFEYLARKFVLVTLIGKDRKELVLNQDYRFTTKTQITTGRTWTAADGYEMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLIADTIGVNNDGNLDARGRKIVNLAFATSDYDAVPLKQITDRESSVWNAVTKASEHADRSNKEANRSRDEADRAKREADRSTQQAGVSATQAVEAKKQADRSNSEANRSKGYADSMTASVEAAKGHAESASKEANRSRAEANRAADEVTKAAAEVSKAAAHVASAKNQADRSSTEANRAKSEADRAKTEADKLGNINEFAGTLEKVEGVTPTFKSGIKLRSGDFYAESGSFTKKTQGGDWSQWTGALTPDVQHDIEGQGNIAYLLERATTLSKEPLYAKCLYNNGVGENFFIRQYLRDAHFDLRADGALISSSGWSIPADGNLYIKKYGSNLDTWVNKRLSAHAYSKGEVNKMVDGLLTTEQGDARYARKSSGWTEVWQGSAGGGVSVSLSQDVRWRTIWILVNNGMCSVQIGADATYFVVVMGGWLKFTISNNGRTFRNDQDRNTVPEQILVRN
Physico‐chemical
properties
protein length:569 AA
molecular weight: 62582,60830 Da
isoelectric point:8,49308
aromaticity:0,07909
hydropathy:-0,58489

Domains

View on InterPro
Domain architecture
YP_919019.1
1 569 aa
ATT 1–130 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Yersinia phage Berlin [NCBI] · taxon 369257
Uroviricota Caudoviricetes Autographivirales Studiervirinae Berlinvirus
Host
Yersinia pestis [NCBI] · taxon 632
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_919019.1 [NCBI]
Genbank nucleotide accession
NC_008694.1 [NCBI]
CDS location
range 31925 -> 33634
strand +
CDS
ATGGCTAACAAAATTTCCACTGTACGTACTTATCCGCTGAACGGTTCCGTGAACTTCACGATTACCTTTGAGTATCTAGCACGTAAGTTCGTCCTAGTGACACTTATAGGGAAAGACCGTAAGGAGTTGGTTCTTAATCAGGACTACCGCTTTACCACTAAGACCCAAATCACAACCGGCCGTACATGGACTGCTGCGGATGGCTATGAGATGATTGAGATTCGTAGATTCACTTCTGCAACCGACCGTCTGGTTGACTTTGCTGATGGCTCAATCCTTCGCGCATATGACCTTAACATCTCACAGATTCAGACACTACACGTAGCTGAGGAGGCACGAGACCTTATTGCGGATACTATTGGTGTCAACAATGATGGCAACCTAGATGCCCGTGGTCGTAAGATTGTGAACCTAGCGTTTGCTACTAGTGATTATGATGCTGTCCCTCTGAAGCAGATTACAGACCGTGAGTCCTCTGTGTGGAACGCTGTGACCAAAGCTAGTGAACATGCTGACCGTTCTAACAAGGAAGCCAATCGCTCACGGGACGAAGCTGACCGTGCTAAACGTGAAGCTGACCGCTCGACCCAACAGGCAGGTGTCTCTGCGACACAAGCAGTTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGTTCTAAAGGTTATGCTGATAGTATGACAGCCAGTGTTGAAGCTGCTAAGGGCCATGCTGAGAGTGCCAGTAAGGAAGCTAATCGTTCCCGTGCTGAGGCTAATCGTGCTGCTGATGAAGTTACTAAGGCCGCTGCTGAGGTTTCCAAAGCTGCTGCACATGTGGCTAGTGCTAAGAATCAGGCCGACCGTTCCAGTACTGAGGCTAATCGTGCTAAGAGTGAAGCAGACCGTGCTAAGACTGAGGCCGATAAGTTAGGCAATATCAATGAGTTCGCTGGAACTCTCGAGAAGGTGGAGGGAGTAACACCAACTTTCAAATCGGGGATTAAACTTCGTTCTGGTGACTTCTATGCCGAGAGTGGTAGCTTCACTAAGAAAACACAGGGTGGCGATTGGAGCCAGTGGACTGGAGCTCTGACACCAGATGTACAACATGATATAGAAGGACAAGGGAACATCGCGTATCTCCTTGAGCGAGCTACAACTTTGAGTAAAGAGCCCTTATATGCTAAGTGCCTATATAATAATGGTGTTGGCGAAAACTTCTTTATCAGGCAGTATCTTCGAGATGCACATTTTGACTTACGCGCCGATGGTGCTCTTATCAGCTCTTCTGGTTGGAGTATCCCAGCCGATGGTAACTTATACATCAAGAAGTATGGGTCGAATCTTGATACATGGGTTAATAAGCGCCTAAGTGCACACGCCTACAGCAAGGGTGAAGTTAACAAGATGGTCGATGGACTACTCACTACCGAACAAGGTGATGCTCGTTATGCACGCAAGAGCTCTGGTTGGACTGAGGTATGGCAAGGCTCTGCTGGTGGTGGTGTTTCAGTAAGCCTCTCACAGGATGTCCGCTGGAGAACTATCTGGATTCTAGTTAATAATGGCATGTGTTCTGTTCAGATTGGAGCTGATGCTACTTACTTCGTGGTGGTTATGGGTGGTTGGTTGAAGTTCACAATTTCCAACAACGGGAGAACTTTCCGTAACGACCAAGATCGAAATACAGTACCTGAGCAAATCTTAGTTCGAAACTGA

Genome Context

Tertiary structure

YP_919019.1
ESMFold structure
Source ESMFold
pLDDT 72.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Sequence of bacteriophage Berlin Rakin,A. 1995-06-15 — GenBank