Protein

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Genbank accession
YP_919019.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Seq2Symm
C6 confidence 0,998
C6 0,998
C3 0,002
C1 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MANKISTVRTYPLNGSVNFTITFEYLARKFVLVTLIGKDRKELVLNQDYRFTTKTQITTGRTWTAADGYEMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLIADTIGVNNDGNLDARGRKIVNLAFATSDYDAVPLKQITDRESSVWNAVTKASEHADRSNKEANRSRDEADRAKREADRSTQQAGVSATQAVEAKKQADRSNSEANRSKGYADSMTASVEAAKGHAESASKEANRSRAEANRAADEVTKAAAEVSKAAAHVASAKNQADRSSTEANRAKSEADRAKTEADKLGNINEFAGTLEKVEGVTPTFKSGIKLRSGDFYAESGSFTKKTQGGDWSQWTGALTPDVQHDIEGQGNIAYLLERATTLSKEPLYAKCLYNNGVGENFFIRQYLRDAHFDLRADGALISSSGWSIPADGNLYIKKYGSNLDTWVNKRLSAHAYSKGEVNKMVDGLLTTEQGDARYARKSSGWTEVWQGSAGGGVSVSLSQDVRWRTIWILVNNGMCSVQIGADATYFVVVMGGWLKFTISNNGRTFRNDQDRNTVPEQILVRN
Physico‐chemical
properties
protein length:569 AA
molecular weight: 62582,60830 Da
isoelectric point:8,49308
aromaticity:0,07909
hydropathy:-0,58489

Domains

View on InterPro
Domain architecture
YP_919019.1
1 569 aa
ATT 1–130 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Yersinia phage Berlin [NCBI] · taxon 369257
Uroviricota Caudoviricetes Autographivirales Studiervirinae Berlinvirus
Host
Yersinia pestis [NCBI] · taxon 632
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_919019.1 [NCBI]
Genbank nucleotide accession
NC_008694.1 [NCBI]
CDS location
range 31925 -> 33634
strand +
CDS
ATGGCTAACAAAATTTCCACTGTACGTACTTATCCGCTGAACGGTTCCGTGAACTTCACGATTACCTTTGAGTATCTAGCACGTAAGTTCGTCCTAGTGACACTTATAGGGAAAGACCGTAAGGAGTTGGTTCTTAATCAGGACTACCGCTTTACCACTAAGACCCAAATCACAACCGGCCGTACATGGACTGCTGCGGATGGCTATGAGATGATTGAGATTCGTAGATTCACTTCTGCAACCGACCGTCTGGTTGACTTTGCTGATGGCTCAATCCTTCGCGCATATGACCTTAACATCTCACAGATTCAGACACTACACGTAGCTGAGGAGGCACGAGACCTTATTGCGGATACTATTGGTGTCAACAATGATGGCAACCTAGATGCCCGTGGTCGTAAGATTGTGAACCTAGCGTTTGCTACTAGTGATTATGATGCTGTCCCTCTGAAGCAGATTACAGACCGTGAGTCCTCTGTGTGGAACGCTGTGACCAAAGCTAGTGAACATGCTGACCGTTCTAACAAGGAAGCCAATCGCTCACGGGACGAAGCTGACCGTGCTAAACGTGAAGCTGACCGCTCGACCCAACAGGCAGGTGTCTCTGCGACACAAGCAGTTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGTTCTAAAGGTTATGCTGATAGTATGACAGCCAGTGTTGAAGCTGCTAAGGGCCATGCTGAGAGTGCCAGTAAGGAAGCTAATCGTTCCCGTGCTGAGGCTAATCGTGCTGCTGATGAAGTTACTAAGGCCGCTGCTGAGGTTTCCAAAGCTGCTGCACATGTGGCTAGTGCTAAGAATCAGGCCGACCGTTCCAGTACTGAGGCTAATCGTGCTAAGAGTGAAGCAGACCGTGCTAAGACTGAGGCCGATAAGTTAGGCAATATCAATGAGTTCGCTGGAACTCTCGAGAAGGTGGAGGGAGTAACACCAACTTTCAAATCGGGGATTAAACTTCGTTCTGGTGACTTCTATGCCGAGAGTGGTAGCTTCACTAAGAAAACACAGGGTGGCGATTGGAGCCAGTGGACTGGAGCTCTGACACCAGATGTACAACATGATATAGAAGGACAAGGGAACATCGCGTATCTCCTTGAGCGAGCTACAACTTTGAGTAAAGAGCCCTTATATGCTAAGTGCCTATATAATAATGGTGTTGGCGAAAACTTCTTTATCAGGCAGTATCTTCGAGATGCACATTTTGACTTACGCGCCGATGGTGCTCTTATCAGCTCTTCTGGTTGGAGTATCCCAGCCGATGGTAACTTATACATCAAGAAGTATGGGTCGAATCTTGATACATGGGTTAATAAGCGCCTAAGTGCACACGCCTACAGCAAGGGTGAAGTTAACAAGATGGTCGATGGACTACTCACTACCGAACAAGGTGATGCTCGTTATGCACGCAAGAGCTCTGGTTGGACTGAGGTATGGCAAGGCTCTGCTGGTGGTGGTGTTTCAGTAAGCCTCTCACAGGATGTCCGCTGGAGAACTATCTGGATTCTAGTTAATAATGGCATGTGTTCTGTTCAGATTGGAGCTGATGCTACTTACTTCGTGGTGGTTATGGGTGGTTGGTTGAAGTTCACAATTTCCAACAACGGGAGAACTTTCCGTAACGACCAAGATCGAAATACAGTACCTGAGCAAATCTTAGTTCGAAACTGA

Genome Context

Tertiary structure

YP_919019.1
ESMFold structure
Source ESMFold
pLDDT 72.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Sequence of bacteriophage Berlin Rakin,A. 1995-06-15 — GenBank