Protein

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Genbank accession
YAA50835.1 [GenBank]
Protein name
tail assembly protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MANAYAYGGGLWSQLLPDIPAPVNVPLYDGGRDLVIAPTGAVRARLAPPTGKKGYGYDAFWEVFKNTLFVQPSAIDLGAILTSSTHSIRLWSTYESKITAASVTRVGTTGLELIGSTTNVALADHGGYEDYTMNVTMGVSGVLDAKFTWEFPGIPAALKTLSVTGTRVIVYDSPPQKRVTERLSWHTAVIKTMDSKEQRIRLKTYPTVEVTYRSLTNIKDSAKYEALIFGIGHGSLAVPVWHEAVRYVGELPIGTTTINIDTRGSNFLVGERLVLWSGMGQYETAEIASVSDTAVVLKSALLKAWESPIVAPMFYGNVDRSDFNKYKVAAVDSVVTYTRTTTELTVEAQPYPVFDSLPILTGNLHTFSKTSPVVISHDVTQLQLGFAPPKNVQQFTFPNVSRDVDVVLSSQREVRDFKKWLAYLGGKQRPFWYRSGRREIAVYGASLQDTDTLTIEDIGFSEHYLVSPTRKWIAVQKASDLTWQYYEVQSVTKVDPTVSSPALERLKLPSNLPYEHTPETVSMVCLMSPVRLDSDQVTIAWDNLNHAKCSLKVLEVSK
Physico‐chemical
properties
protein length:558 AA
molecular weight: 61683,52590 Da
isoelectric point:6,81354
aromaticity:0,09857
hydropathy:-0,10215

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YAA50835.1
1 558 aa
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,8892
Central domain 28 226 200 0,0301
C-terminal 227 558 331 0,5257
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage Xw-1 [NCBI] · taxon 3459118
Viruses
Host
Vibrio parahaemolyticus [NCBI] · taxon 670
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YAA50835.1 [NCBI]
Genbank nucleotide accession
PX096587 [NCBI]
CDS location
range 28650 -> 30326
strand +
CDS
ATGGCTAACGCATACGCATACGGGGGAGGGCTGTGGTCGCAGCTTCTCCCAGACATACCAGCACCAGTAAATGTACCACTTTACGATGGTGGCAGGGACTTAGTAATCGCGCCTACTGGGGCGGTGCGGGCACGGCTTGCTCCACCTACTGGCAAGAAGGGGTACGGCTACGACGCTTTCTGGGAAGTGTTCAAGAATACGCTGTTTGTCCAGCCTTCTGCGATAGACCTAGGCGCGATACTGACATCCAGTACACACAGTATCCGCCTCTGGTCCACGTACGAATCCAAGATCACGGCAGCGTCGGTAACTCGCGTGGGAACCACCGGGCTAGAGCTTATAGGTAGTACCACTAACGTTGCGTTGGCGGATCACGGGGGTTACGAGGACTACACTATGAACGTTACTATGGGTGTTTCTGGAGTACTAGACGCTAAGTTCACGTGGGAGTTTCCGGGAATACCAGCGGCACTGAAGACACTTAGCGTAACTGGTACACGTGTTATCGTTTACGACTCGCCACCGCAGAAGCGCGTAACCGAACGACTTTCATGGCATACTGCCGTTATTAAGACTATGGATTCGAAAGAGCAACGTATACGCCTTAAGACGTATCCTACAGTCGAAGTTACTTATCGGTCTCTTACTAATATTAAAGATTCCGCTAAGTACGAGGCGCTAATCTTTGGCATAGGGCATGGGTCTCTTGCGGTCCCAGTATGGCATGAGGCGGTGCGGTATGTTGGGGAGCTGCCTATCGGCACTACGACAATTAACATCGACACACGTGGTAGTAACTTCTTAGTAGGAGAGCGTCTGGTGTTGTGGTCAGGTATGGGGCAGTACGAGACAGCCGAGATAGCCTCGGTATCGGACACTGCTGTAGTCTTAAAGTCGGCATTACTAAAAGCGTGGGAGTCACCTATAGTGGCACCTATGTTCTATGGCAATGTTGATCGCAGTGACTTCAATAAGTACAAGGTAGCTGCGGTAGACAGTGTTGTGACTTACACCAGAACTACTACAGAGTTGACGGTAGAAGCCCAGCCGTACCCGGTATTCGACAGCCTGCCAATCCTAACTGGAAATCTACATACATTTAGTAAGACTAGCCCTGTGGTTATATCTCATGATGTAACACAGCTACAGCTTGGCTTCGCGCCACCCAAAAACGTGCAGCAGTTTACGTTCCCAAATGTTAGCCGCGACGTGGATGTGGTGCTCAGCAGTCAGCGTGAAGTACGGGACTTTAAGAAGTGGCTGGCTTACCTTGGGGGTAAGCAGAGACCATTCTGGTACAGGTCTGGACGTAGGGAGATCGCCGTCTACGGTGCGTCTCTGCAAGATACTGACACGCTTACTATTGAGGACATCGGATTCTCAGAGCACTACTTAGTATCGCCAACACGTAAGTGGATCGCAGTGCAGAAGGCATCCGACCTAACGTGGCAGTACTACGAGGTTCAGAGTGTTACTAAGGTAGACCCTACAGTAAGCTCACCAGCACTGGAGCGCCTTAAACTACCTAGTAACCTACCTTATGAGCATACACCGGAGACAGTTAGCATGGTATGCTTAATGTCCCCGGTACGTCTGGACTCAGACCAAGTTACTATTGCGTGGGACAACCTTAACCACGCTAAGTGCTCACTAAAAGTTCTGGAGGTTAGTAAGTAA

Genome Context

Tertiary structure

YAA50835.1
ColabFold structure
Source ColabFold
pLDDT 72.5
Oligomeric state monomer
Download structure