Phage RBP Database

Genbank accession

WVX89584.1 [GenBank]

Protein name

minor tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C1 confidence 0,328

C1	0,328
I	0,035
C3	0,020

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPKPSIQAPIDRPLSRAYLREFSGWSTAYPPGLSDSTSLRTMENVYITREGAARVRPGTRSVFTANWWLGNAGESIVGSFEHFIYDASGRTALLFAVRKPDNTIGFRVVVYNEATQRFNDVPGMFASMTFGASTTFVKYLQIDNKILALSDSVGEPAILFNVGATKSAKKISANGLNITPSSWTPTVVHPEADWINTPNNTTRPTGSETPTPQTLIAPFPNFGNATTGNGLPFTVPGHGLVLNQAVNLKGTTAPGGFTLNTTYYVKEIPSKDSFRLSTTMGGAVANPTSAGAGLYFEYGPRPDGSAWNDPNIYSFGYFITFETEFGESVPSEIRVLKTQRGWSQWKFNAPDALGNPTSTLVVNPSLAMDQLVVMLPLGNYNTIKNLGAIKWNVYMFSWSDTSPVPAVATLVGSKDITPNGTEATESWIVNTGAALADSYVVPVPNAENRVNYSGAPTARQGIAAGDRMILVGDGINQALIRWSANVPKEYTNFSISKGGGTKVLSSGNLLVPLNVQLWQNPQSTDTLVILCKGLNGYHAAYYMAPASVSGQSDSTLIMGFEETTATPGTVSPYGVEVYNNKLYHPLEAELMASSAQNYTITHKTMTTDIANKWQMLANKEDIVSSQHDGRLYFIVNNPDGEALQQDCMGNEVWVLDVSGTEPTWSRWLVQGISLKKLQIGNKLYMAVVKPDAIFIFDEMSYTDEYAAGASTQRKNIPWKLETNTMGANRQHDAWAYLDQASLHIGDFVGGFEWGVRGIDINGMVVEKKKRTHSKQDSTGISIANGVISGGVDLGDTSDQMLVERNMMEWTFFAQSIVGAPVDNPNGPAEVWRSFGQIDYVQFLMTQLSTNVGYEVGSIETFEYRRDAARGPVTSGPTRNGVPMPMDLRRP

Physico‐chemical properties

protein length:	890 AA
molecular weight:	96959,99810 Da
isoelectric point:	5,50607
aromaticity:	0,10000
hydropathy:	-0,23764

No domain architecture available.

No domain annotations available.

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0566
STR

DC_0566

WVX89584.1

1890 aa

InterPro domain annotations

No domain annotations available.

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WVX89584.1

1 890 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	179	179	0,8739
Central domain	180	378	200	0,2668
C-terminal	379	890	511	0,2455

Note: Constraints were applied during segmentation.
Fixed 12 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Microbacterium phage HitchHiker [NCBI] · taxon 3118981

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

WVX89584.1 [NCBI]

Genbank nucleotide accession

PP208939 [NCBI]

CDS location

range 43482 -> 46154
strand +

CDS

ATGCCGAAGCCATCTATTCAGGCTCCAATCGACCGTCCACTGTCTCGCGCATACCTGCGTGAATTCAGTGGATGGTCGACGGCGTACCCTCCGGGCCTGTCAGACTCGACGTCTCTTCGCACAATGGAGAACGTGTACATTACCCGAGAGGGCGCAGCTCGTGTGCGTCCTGGTACTCGGTCCGTGTTCACTGCTAACTGGTGGCTGGGAAACGCGGGCGAGTCAATCGTCGGCTCGTTCGAGCACTTCATCTACGACGCATCAGGCCGAACGGCTCTGCTGTTTGCAGTACGTAAGCCGGACAACACGATTGGGTTCCGTGTAGTCGTGTACAACGAAGCTACTCAACGCTTCAACGACGTGCCAGGCATGTTCGCAAGCATGACCTTCGGTGCCAGCACTACGTTCGTCAAGTACCTCCAGATCGATAACAAGATTCTCGCACTGTCAGACAGCGTAGGCGAGCCTGCCATTCTGTTCAACGTGGGTGCGACAAAGAGTGCCAAGAAGATTTCCGCGAACGGGCTCAACATCACTCCGAGTTCCTGGACGCCTACGGTCGTCCACCCCGAAGCGGACTGGATCAACACTCCGAACAACACAACGCGCCCGACTGGTTCTGAGACTCCGACGCCGCAGACGCTGATCGCTCCGTTCCCGAACTTCGGTAACGCCACGACCGGTAACGGACTTCCTTTCACTGTGCCAGGGCACGGCCTGGTGTTGAACCAAGCAGTCAACCTCAAGGGTACCACGGCTCCGGGCGGGTTTACTCTCAACACGACTTACTACGTGAAGGAGATCCCTTCCAAAGATTCTTTCCGTCTGTCTACGACTATGGGTGGTGCGGTAGCCAACCCTACGTCTGCGGGTGCAGGACTCTACTTCGAGTACGGGCCTCGCCCTGACGGCTCTGCCTGGAACGATCCGAACATCTACTCGTTCGGGTACTTCATCACGTTCGAGACAGAGTTCGGAGAGTCTGTTCCGAGCGAGATTCGGGTACTCAAGACCCAGCGAGGCTGGAGCCAGTGGAAGTTCAACGCTCCTGACGCTCTCGGTAACCCTACGAGTACTCTGGTCGTCAACCCTTCGCTGGCAATGGATCAGCTCGTAGTTATGCTGCCTCTCGGCAACTACAACACGATCAAGAATCTAGGCGCGATTAAGTGGAACGTCTACATGTTCAGCTGGAGCGACACGTCTCCTGTTCCTGCAGTAGCGACACTGGTCGGTAGCAAAGACATTACGCCGAACGGTACCGAGGCTACGGAGTCTTGGATCGTCAACACTGGCGCGGCTCTGGCTGACAGCTATGTAGTGCCCGTGCCCAACGCCGAGAACCGAGTGAACTACTCAGGGGCACCCACTGCTCGTCAGGGCATTGCAGCGGGCGACCGCATGATCCTGGTGGGTGACGGTATCAACCAGGCTCTCATTCGCTGGTCTGCGAACGTTCCCAAGGAGTACACCAACTTCTCTATCAGCAAGGGCGGCGGTACCAAGGTGCTGTCCAGTGGTAACCTCCTGGTGCCGCTGAACGTACAGCTGTGGCAGAATCCTCAGTCTACAGACACGCTCGTCATTCTCTGCAAGGGGTTGAACGGCTATCATGCGGCTTACTACATGGCTCCGGCTTCCGTCAGTGGTCAATCCGACTCTACTCTCATCATGGGATTCGAGGAAACGACAGCAACTCCGGGTACTGTATCACCCTATGGAGTTGAAGTCTACAACAACAAGCTTTACCATCCCCTCGAAGCTGAGCTCATGGCGAGCTCGGCGCAGAACTACACGATCACGCACAAGACGATGACAACCGACATCGCGAACAAGTGGCAGATGCTCGCGAACAAGGAAGACATCGTGTCTTCCCAGCACGACGGCCGTCTGTACTTCATCGTCAACAACCCCGACGGAGAGGCTCTGCAGCAGGACTGCATGGGAAACGAGGTCTGGGTGCTTGACGTGAGCGGCACCGAGCCGACGTGGTCGCGCTGGCTGGTGCAGGGCATCTCGCTCAAGAAGCTCCAGATCGGTAACAAGCTGTACATGGCCGTGGTTAAGCCTGACGCTATCTTCATCTTTGATGAAATGTCCTACACCGACGAGTATGCGGCAGGGGCGAGCACTCAGCGGAAGAACATTCCTTGGAAGCTCGAGACCAACACCATGGGCGCAAACCGTCAGCACGACGCGTGGGCGTACCTGGACCAGGCATCGCTGCACATTGGCGATTTCGTGGGTGGCTTCGAATGGGGCGTTCGAGGCATCGACATCAACGGTATGGTCGTCGAGAAAAAGAAGCGCACTCACTCGAAGCAGGACAGCACTGGTATTAGCATTGCTAATGGCGTCATCAGCGGAGGCGTAGATCTCGGCGACACGTCCGACCAGATGTTGGTAGAGCGTAACATGATGGAGTGGACATTCTTTGCTCAGTCCATCGTGGGCGCTCCGGTCGACAACCCGAACGGTCCTGCAGAGGTCTGGCGCTCGTTCGGCCAGATCGACTACGTGCAGTTCCTCATGACGCAGCTGTCGACCAACGTCGGGTACGAGGTTGGCTCGATCGAAACGTTCGAGTACCGTCGTGACGCAGCTCGTGGTCCTGTGACTTCCGGGCCTACTCGTAACGGCGTTCCCATGCCCATGGATCTTCGCAGACCGTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)