Protein

View in Explore
Genbank accession
QPB07514.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
VEFYLKDSLLFAPLSKQLYPSVLTGTETGDNWIRKDMEVDTDSEEVLISTALRNLRKYCYPAITYEADGYFDLDIGDTVKIQDTGFSPMLVLEARVSEQQISFTNPSENKTVFANFQALQNKVSDSLLTRMAKLAEQAIPYELKLSTDQGTTFKNSTGQSLLMATLEKNGKVYEPIIFYKKGDSIIGSGSQMLVRATDFEGTLQVTVEAYLNDEKVATAEVTFSNVADGQAGAKGDKGDPGAQGPPGPKGDKGALDEEQLKQVNDKIDSKADNKLTAEQLNALTEAMQLAKAELEAKASIDTVNEWIKSYQDYVKADEAGRAAAEAKLVSASQRLTKIENNLGDMAERWSFLDLYMSASNDGLNIGKKDGSSSVRIDHDRISFYSAGSEVAYISQGVLKIENGVFTRTLQIGRFREEQYNLNPDMNVIRYVGGGA
Physico‐chemical
properties
protein length:435 AA
molecular weight: 47769,89820 Da
isoelectric point:4,72010
aromaticity:0,08046
hydropathy:-0,42690

Domains

Domains [InterPro]
DC_0921
STR
1–433
DC_0921
G3DSA:1.20.5.320
STR
227–275
G3DSA:1.20.5.320 Coil
Coil
Unmapped
273–297
Coil
QPB07514.1
1 435
Architecture
STR
STR 1-433 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-5
[NCBI] 		2781359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB07514.1 [NCBI]
Genbank nucleotide accession
MW057932.1 [NCBI]
CDS location
range 1 -> 1309
strand +
CDS
AGTCGAGTTCTACCTCAAGGATAGCTTGCTTTTTGCTCCACTATCTAAACAATTATATCCGTCAGTTTTGACTGGTACTGAGACAGGCGATAACTGGATACGCAAGGACATGGAAGTCGATACAGATAGCGAAGAAGTGCTTATCTCCACGGCCTTGCGTAATCTACGTAAATATTGCTATCCAGCTATCACATACGAAGCAGATGGATATTTTGATTTAGATATCGGAGACACTGTCAAAATCCAAGACACAGGCTTTAGTCCTATGTTGGTGCTGGAAGCTCGTGTCAGTGAGCAACAAATCAGCTTTACTAATCCAAGCGAAAACAAGACGGTCTTTGCAAACTTTCAAGCTCTTCAAAACAAGGTATCAGATAGCTTGCTAACTCGCATGGCTAAGCTGGCAGAGCAAGCGATACCGTATGAGCTGAAATTATCCACAGACCAAGGAACGACCTTTAAAAATAGCACAGGGCAAAGCTTGCTCATGGCTACACTAGAAAAGAATGGCAAGGTGTACGAGCCAATCATCTTCTACAAGAAAGGCGACTCTATCATCGGCAGCGGTAGTCAAATGCTTGTGCGTGCGACAGACTTTGAGGGTACTCTGCAAGTAACGGTTGAAGCCTATCTAAATGACGAGAAAGTGGCAACAGCAGAAGTGACTTTTAGCAACGTGGCTGACGGTCAAGCCGGTGCGAAAGGTGACAAAGGCGACCCTGGCGCACAAGGTCCTCCCGGCCCTAAAGGCGATAAAGGAGCGCTCGACGAGGAGCAACTCAAACAAGTCAATGACAAGATTGACAGCAAGGCCGACAACAAGCTAACTGCAGAGCAACTAAACGCTTTAACAGAAGCCATGCAACTAGCTAAGGCGGAGTTAGAAGCCAAAGCAAGCATTGACACAGTCAACGAATGGATAAAATCCTATCAAGACTATGTCAAAGCAGACGAAGCTGGACGAGCTGCGGCAGAAGCTAAACTTGTATCTGCAAGTCAGAGATTAACCAAGATTGAGAATAATCTGGGCGACATGGCTGAAAGATGGAGCTTCTTAGACCTCTACATGAGCGCTAGCAATGACGGTTTGAATATCGGTAAGAAAGATGGATCATCTTCTGTCCGTATCGACCACGACCGCATCAGCTTTTACTCTGCAGGCTCTGAGGTGGCTTATATCTCGCAAGGTGTCCTCAAGATTGAGAACGGGGTGTTCACTCGAACACTTCAAATTGGACGCTTTAGAGAAGAACAGTATAATCTCAATCCAGATATGAATGTAATCCGATATGTAGGGGGAGGTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee19240b285e79e5744a56e0ef3dd2e8a03d854f9649dbf2acc94c0d80175ad2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7760
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank