Protein

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Genbank accession
AKI86017.1 [GenBank]
Protein name
putative DNA-binding protein Roi
RBP type
TF
Evidence RBPdetect2
Probability 0,75
Seq2Symm
C1 confidence 0,734
C1 0,734
C2 0,542
D2 0,038
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MNELINSNAIKMTSIEIAELVGSRHDKVKQSIERLAVRGVIRNPPMVVFEKINNLGLLRGVEAYVFEGEQGKRDSIIVVAQLSPEFTARLVDRWRELEGATAKIPQTFSEALRLAADLEDQKAELEKQLALAAPKVEFADRVGEASGILIGNFAKVVGIGPNKLFAWMRDHKILIASGSRRNVPMQEYMDRGYFTVKETAVNTNHGIQISFTTKITGRGQQWLTRKLLDNGMLKVTREAA
Physico‐chemical
properties
protein length:240 AA
molecular weight: 26773,61950 Da
isoelectric point:9,42014
aromaticity:0,06250
hydropathy:-0,20583

Taxonomy

Phage
Escherichia phage PA4 [NCBI] · taxon 1660374
Uroviricota Caudoviricetes Sepvirinae Traversvirus II
Host
Escherichia coli PA4 [NCBI] · taxon 1005489
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli

Coding sequence (CDS)

Genbank protein accession
AKI86017.1 [NCBI]
Genbank nucleotide accession
KP682372 [NCBI]
CDS location
range 18225 -> 18947
strand +
CDS
ATGAATGAGCTGATAAATAGCAATGCCATCAAAATGACAAGCATTGAAATCGCTGAGTTGGTGGGAAGCCGTCATGACAAGGTGAAACAATCCATTGAACGACTGGCGGTTCGAGGTGTGATCCGAAATCCCCCAATGGTGGTTTTCGAAAAAATCAATAACTTAGGATTACTTCGTGGCGTAGAGGCTTACGTTTTTGAGGGCGAACAAGGTAAGCGCGACAGCATTATTGTCGTTGCCCAGTTGTCGCCGGAATTCACCGCTCGCCTTGTTGACCGCTGGCGAGAACTCGAAGGGGCAACCGCGAAAATACCACAAACCTTTTCTGAGGCATTGCGCCTTGCGGCCGACCTTGAAGACCAGAAGGCTGAACTGGAGAAACAGCTTGCTCTCGCAGCACCTAAAGTTGAGTTTGCCGATCGCGTTGGCGAGGCCAGCGGAATTTTGATTGGAAACTTTGCAAAGGTTGTTGGTATTGGTCCAAACAAACTGTTTGCGTGGATGCGCGATCACAAAATCCTTATTGCTTCAGGCTCCCGGCGCAATGTGCCAATGCAGGAATATATGGATCGTGGCTATTTCACAGTGAAAGAAACAGCGGTCAATACAAATCACGGAATACAGATATCGTTCACCACAAAAATCACCGGGCGTGGTCAACAGTGGCTGACCAGAAAGCTGCTCGATAACGGAATGCTGAAAGTAACAAGGGAGGCTGCTTAA

Genome Context

Tertiary structure

AKI86017.1
ESMFold2 structure
Source ESMFold2
pLDDT 90.5
Oligomeric state monomer
Download structure