Protein

View in Explore
Genbank accession
WAB24179.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MPSTGKTPTLGLNKWELTDKPKMKDFNKDNENIENFAAEHKQKMTEVEKKSKSNEDRLDALRVGTINRLEWYNSESYTGPGNITSITDAPTKRRGFKWSGMSTGPQTLEIKTLPIEPNSDYVLAFLEDIEGSFTSYEIKLAYTSGGQQYKSIVKQGSTPQSNGYKLKTHKFSIPSGATDTKIQFVVQGATSSTSLKVLNLLLARGNVVPDYNLAPEDVLKRLDLLFEKDTSLQNQVNQKAAKVDVIQKVDVPVDRDCNSFKAGNSFCSFDTGNGDFKNTPEGTLAQGSARVFILRNTGLGDGKNRFQQEFINLYPSDTITRYIRNYVYESNTWGKWHKAYDSANKPTPEEIGAYSAYLDMNDTDLNNIKIPGIYSGYKNMANAPSQGISIMEVIRYSPDWVVQRFKTIPPNGKGITYTRGFYNGNTWSDWVKVYDENNRPTPADIGAWDKTAKRLEGVDLNTITEGGIYSTVRNSVDRNAPISADGRLIVLSWNTGHWASQMFFADGGRVFTRTATNLEGTGWTNWAEIYSKQNKPTPQDIGALPTTGGELSGHLIMRPGQKFIGAHNYGFSCRTKEGSDDYVIYIDADNKVHVGYAGRPVKIDSLDIVNKNNKKIYHEDNKPTAADVGASPTNHTHDDRYLQSIKGEVLDFNDIKSPGTFTVGGNDIPNAPHTGSIYGTLLSMSKKGGEYNQLFINSTGLVYARFYNNQGYWTEWNKLYGSINKPRPSEIGAADSNHNHDNAYLGKTSTAANSNKLKNWELAEGNTNFIGIPFIPHDGVMEVGRMIDFHEPGTNKDFNTRLESINGALKCWQDFSAENLWARKYMRINDWYGGSEDGRFYYKQDGKGLYTENVENLYVKDSPVAKGDYWDVGDNTRVVSLGGGLRLVRQWIGTNASNSGGGVSYTIHFPKAWKWVIPISLVSDNMANANTYTSGYCTIDALSNVHLNGGCYQMVAGKSTRIHLTYLAAE
Physico‐chemical
properties
protein length:970 AA
molecular weight: 108029,11110 Da
isoelectric point:7,27206
aromaticity:0,10722
hydropathy:-0,62505

Domains

Domains [InterPro]
Coil
23–57
Coil cd19958 cd19958 cd19958
WAB24179.1
1 970
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage C2
[NCBI] 		2999103 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAB24179.1 [NCBI]
Genbank nucleotide accession
OP753450.1 [NCBI]
CDS location
range 23003 -> 25915
strand -
CDS
ATGCCAAGTACTGGTAAAACTCCTACTCTAGGTTTAAATAAGTGGGAGTTAACAGATAAGCCAAAAATGAAGGATTTTAACAAGGACAATGAAAACATTGAGAACTTCGCTGCCGAACATAAACAGAAAATGACTGAGGTAGAAAAGAAGTCTAAGTCTAATGAGGATAGGCTAGATGCTTTAAGGGTTGGTACTATTAATAGGCTTGAGTGGTACAACTCTGAGTCTTATACTGGTCCTGGTAATATCACATCTATTACAGATGCTCCAACTAAGAGACGAGGTTTTAAATGGTCAGGTATGTCAACAGGCCCACAAACTCTTGAAATTAAAACTCTGCCTATAGAACCAAATAGTGATTATGTATTAGCCTTCTTAGAAGATATTGAAGGTAGTTTTACTAGCTATGAGATTAAACTGGCTTACACTAGTGGAGGCCAACAATATAAGAGCATTGTAAAACAAGGTAGTACACCACAGAGTAATGGGTATAAATTAAAAACTCATAAGTTCAGTATTCCTTCTGGAGCTACTGATACTAAAATTCAATTTGTGGTACAGGGTGCAACCTCAAGCACATCATTAAAGGTACTAAACCTATTACTAGCTAGAGGTAATGTAGTACCTGACTATAACCTAGCCCCTGAGGATGTACTGAAAAGACTAGACCTATTATTTGAGAAAGACACTAGTTTACAAAATCAAGTAAACCAAAAAGCTGCCAAAGTGGATGTGATCCAAAAGGTCGATGTACCTGTGGATAGGGATTGTAATTCCTTTAAAGCAGGAAACTCCTTCTGCTCCTTTGATACGGGGAATGGTGATTTTAAAAATACACCCGAGGGAACACTGGCCCAGGGGAGTGCTAGGGTATTTATTCTTAGAAATACAGGTTTAGGTGATGGTAAGAATAGGTTTCAACAGGAGTTTATTAATCTATATCCTAGCGATACTATCACTCGATATATTAGGAACTATGTATATGAGAGTAACACATGGGGAAAGTGGCATAAGGCCTATGATAGTGCCAATAAGCCTACTCCTGAAGAAATTGGTGCTTATTCTGCATATTTAGACATGAATGATACTGACTTAAATAATATTAAAATACCTGGAATATATAGTGGGTATAAAAACATGGCAAATGCTCCTTCTCAGGGTATATCAATTATGGAAGTTATTAGGTATAGCCCCGATTGGGTAGTACAGAGGTTTAAAACAATACCTCCAAATGGTAAGGGTATTACCTATACTAGAGGGTTTTATAATGGGAACACCTGGTCTGATTGGGTAAAGGTTTATGATGAGAATAACAGACCTACTCCCGCTGATATAGGGGCCTGGGATAAAACAGCCAAAAGACTAGAGGGTGTAGATCTAAACACCATTACAGAGGGGGGTATTTATTCTACAGTTAGAAATTCTGTCGATAGAAATGCCCCAATCTCAGCAGATGGGAGATTGATTGTTTTATCCTGGAATACAGGACACTGGGCTTCTCAAATGTTCTTTGCAGATGGTGGAAGAGTTTTTACTAGAACAGCTACAAACCTGGAGGGTACTGGATGGACGAATTGGGCTGAAATATATAGTAAACAAAATAAGCCCACTCCTCAGGATATTGGAGCTCTACCTACTACAGGGGGTGAGTTATCAGGCCATTTAATTATGAGACCAGGTCAGAAATTTATTGGAGCCCACAATTATGGATTTAGTTGTAGAACTAAAGAAGGCAGTGATGACTATGTGATATATATAGATGCTGATAACAAAGTTCACGTGGGGTATGCTGGAAGGCCTGTAAAGATAGACTCTTTAGATATTGTTAATAAGAATAATAAGAAGATCTATCATGAAGATAATAAACCAACAGCAGCAGATGTGGGGGCATCCCCAACTAACCATACCCATGATGATAGATATCTACAAAGTATTAAGGGAGAGGTTTTAGATTTTAATGACATTAAATCCCCAGGAACCTTTACAGTAGGGGGAAATGATATACCCAACGCCCCTCACACTGGAAGTATATATGGAACTCTTCTATCAATGAGTAAGAAGGGTGGAGAATATAACCAATTATTTATTAATAGTACTGGCTTAGTATATGCTAGGTTCTATAATAATCAAGGATATTGGACTGAATGGAATAAATTATATGGGAGTATTAACAAGCCTAGACCTTCTGAGATAGGAGCTGCAGACTCTAACCATAACCATGATAATGCTTACTTAGGTAAAACATCTACAGCTGCTAATAGTAATAAATTAAAGAATTGGGAGTTAGCCGAAGGCAATACCAACTTCATAGGTATTCCTTTCATACCCCATGATGGTGTTATGGAAGTGGGTAGAATGATTGACTTCCATGAACCTGGGACAAATAAAGACTTTAATACCCGATTAGAGTCTATTAATGGAGCTCTAAAATGCTGGCAAGATTTCTCAGCTGAAAACTTATGGGCCAGAAAATATATGAGGATAAATGACTGGTATGGTGGATCTGAGGATGGCAGATTCTACTATAAACAAGACGGAAAAGGGTTATATACTGAAAATGTAGAAAACCTCTATGTAAAAGATAGTCCTGTAGCCAAAGGGGACTATTGGGATGTAGGAGATAATACCCGAGTGGTTAGTCTGGGGGGAGGACTAAGGTTAGTTCGTCAGTGGATTGGTACTAATGCTTCCAACTCAGGTGGGGGGGTAAGCTACACTATTCACTTCCCAAAAGCATGGAAGTGGGTAATACCCATATCTCTAGTAAGTGATAATATGGCTAATGCTAATACCTACACCTCTGGATATTGTACTATAGATGCCCTATCAAATGTTCACCTAAATGGGGGATGTTATCAAATGGTTGCGGGTAAGAGTACACGAATACACTTAACTTACTTAGCAGCTGAGTAA

Tertiary structure

PDB ID
e11778f284ea818296493cf723f9b1db2a2b0bbfdd55ec34f686963bf46307a2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophage isolates from reduced Clostridium perfringens induced lesions in necrotic enteritis challenged broilers Wu,S.-B. 2022-12-22 — GenBank