Protein

View in Explore
Genbank accession
APU00303.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Seq2Symm
C1 confidence 0,043
C1 0,043
I 0,033
C10-C17 0,023
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MASRLTTLDVVNACLATMGESPLNALDADHPYVQSALNAMSEASMTELSRGWWFNIDTVMLKPDAEHGFVYLPDDVLNVDTPASQLVQRGRRLYDSVNSTYDMTLALSAMQAAVIPAIVTRDVPFDDLPILAQHLISARTALQFQASYDGDSKRYQELGQHYQQMYNTIKAHDIRNRRVNMLTSPGVAEKLNRIRPLSTWTATSWRRNRV
Physico‐chemical
properties
protein length:210 AA
molecular weight: 23644,54490 Da
isoelectric point:6,18831
aromaticity:0,07619
hydropathy:-0,28905

Domains

View on InterPro
Domain architecture
APU00303.1
1 210 aa
TTP 8–185 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Ralstonia phage RS-PII-1 [NCBI] · taxon 1932892
Uroviricota Caudoviricetes Autographivirales Sukuvirus Sukuvirus RSPII1
Host
Ralstonia solanacearum [NCBI] · taxon 305
cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Coding sequence (CDS)

Genbank protein accession
APU00303.1 [NCBI]
Genbank nucleotide accession
KY316062.1 [NCBI]
CDS location
range 18931 -> 19563
strand -
CDS
ATGGCTTCTCGCCTTACAACGCTCGATGTGGTGAACGCCTGCCTCGCAACGATGGGCGAGAGTCCACTAAATGCCCTAGACGCCGACCATCCATACGTACAGTCGGCGCTGAACGCCATGTCCGAGGCCAGCATGACCGAGTTGAGTCGTGGATGGTGGTTCAACATCGACACCGTGATGCTCAAGCCGGACGCCGAGCACGGCTTTGTGTACCTGCCGGACGACGTGCTGAACGTGGACACCCCGGCCTCGCAACTAGTGCAGCGCGGACGCCGCCTGTACGACTCGGTGAACTCAACCTACGACATGACCCTCGCGCTGTCTGCCATGCAGGCAGCCGTCATCCCGGCGATTGTCACCCGCGACGTTCCTTTCGATGACCTGCCGATTCTGGCGCAGCACCTTATCTCGGCGCGCACGGCACTGCAATTCCAAGCCAGCTACGACGGCGACTCGAAGCGGTATCAGGAACTCGGTCAGCACTACCAGCAGATGTACAACACGATCAAGGCCCACGACATCCGCAACCGCAGAGTCAACATGCTGACCTCGCCCGGCGTGGCGGAGAAGCTGAACCGCATCCGCCCGCTCAGTACATGGACGGCGACTAGCTGGAGGAGGAACCGCGTATGA

Genome Context

Tertiary structure

APU00303.1
ESMFold structure
Source ESMFold
pLDDT 91.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation, Whole Genome Sequencing Analysis of a Novel Lytic Bacteriophage RS-PII-1 infecting Ralstonia solanacearum Su,J., Liu,J., Yu,H., Guo,Z., Sun,H., Fan,G., Gu,G. and Wang,G. 2017-09-19 — GenBank